RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 NCKAP5LQ9HCH0 1330 aa33.9■■■■□ 3.02
HOXA3-205ENST00000522456 IQSEC2Q5JU85 1478 aa33.89■■■■□ 3.02
HOXA3-205ENST00000522456 PPARGC1BQ86YN6 1023 aaKnown RBP33.86■■■■□ 3.01
HOXA3-205ENST00000522456 TCOF1Q13428 1488 aaKnown RBP33.85■■■■□ 3.01
HOXA3-205ENST00000522456 KIF3BO15066 747 aa33.84■■■■□ 3.01
HOXA3-205ENST00000522456 TSPY4P0CV99 314 aa33.84■■■■□ 3.01
HOXA3-205ENST00000522456 TSPY10P0CW01 314 aa33.84■■■■□ 3.01
HOXA3-205ENST00000522456 PKD2Q13563 968 aa33.84■■■■□ 3.01
HOXA3-205ENST00000522456 FAM135AQ9P2D6 1515 aa33.84■■■■□ 3.01
HOXA3-205ENST00000522456 KDM5DQ9BY66 1539 aa33.83■■■■□ 3.01
HOXA3-205ENST00000522456 A2ML1A8K2U0 1454 aa33.82■■■■□ 3
HOXA3-205ENST00000522456 FGD6Q6ZV73 1430 aa33.8■■■■□ 3
HOXA3-205ENST00000522456 MAST1Q9Y2H9 1570 aa33.8■■■■□ 3
HOXA3-205ENST00000522456 PTPN23Q9H3S7 1636 aa33.79■■■■□ 3
HOXA3-205ENST00000522456 DNMT1P26358 1616 aaKnown RBP33.78■■■■□ 3
HOXA3-205ENST00000522456 ZNF335Q9H4Z2 1342 aaPredicted RBP33.78■■■■□ 3
HOXA3-205ENST00000522456 PZPP20742 1482 aa33.76■■■■□ 3
HOXA3-205ENST00000522456 TNRQ92752 1358 aa33.75■■■□□ 2.99
HOXA3-205ENST00000522456 WASHC2CQ9Y4E1 1318 aa33.72■■■□□ 2.99
HOXA3-205ENST00000522456 FBXO31Q5XUX0 539 aaPredicted RBP33.71■■■□□ 2.99
HOXA3-205ENST00000522456 SHANK2Q9UPX8 1470 aa33.69■■■□□ 2.98
HOXA3-205ENST00000522456 FAM50AQ14320 339 aaKnown RBP33.68■■■□□ 2.98
HOXA3-205ENST00000522456 DISP3Q9P2K9 1392 aa33.68■■■□□ 2.98
HOXA3-205ENST00000522456 CROCC2H7BZ55 1655 aa33.67■■■□□ 2.98
HOXA3-205ENST00000522456 POLR1AO95602 1720 aaPredicted RBP33.66■■■□□ 2.98
HOXA3-205ENST00000522456 RNF17Q9BXT8 1623 aaKnown RBP33.64■■■□□ 2.98
HOXA3-205ENST00000522456 ABCC5O15440 1437 aa33.62■■■□□ 2.97
HOXA3-205ENST00000522456 NEURL4Q96JN8 1562 aa33.62■■■□□ 2.97
HOXA3-205ENST00000522456 DAPK1P53355 1430 aa33.62■■■□□ 2.97
HOXA3-205ENST00000522456 NLRP1Q9C000 1473 aa33.61■■■□□ 2.97
HOXA3-205ENST00000522456 EIF2AK4Q9P2K8 1649 aaKnown RBP33.59■■■□□ 2.97
HOXA3-205ENST00000522456 SPATA31D1Q6ZQQ2 1576 aa33.59■■■□□ 2.97
HOXA3-205ENST00000522456 ZC3H13Q5T200 1668 aaKnown RBP33.58■■■□□ 2.97
HOXA3-205ENST00000522456 UBAP1LF5GYI3 381 aa33.58■■■□□ 2.97
HOXA3-205ENST00000522456 ABCC3O15438 1527 aa33.58■■■□□ 2.97
HOXA3-205ENST00000522456 DUOX2Q9NRD8 1548 aa33.56■■■□□ 2.96
HOXA3-205ENST00000522456 UGGT1Q9NYU2 1555 aa33.55■■■□□ 2.96
HOXA3-205ENST00000522456 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.54■■■□□ 2.96
HOXA3-205ENST00000522456 CHIC2Q9UKJ5 165 aa33.53■■■□□ 2.96
HOXA3-205ENST00000522456 THEMISQ8N1K5 641 aaPredicted RBP33.52■■■□□ 2.96
HOXA3-205ENST00000522456 KIF15Q9NS87 1388 aa33.51■■■□□ 2.96
HOXA3-205ENST00000522456 MROH1Q8NDA8 1641 aa33.51■■■□□ 2.96
HOXA3-205ENST00000522456 ANKLE2Q86XL3 938 aa33.51■■■□□ 2.95
HOXA3-205ENST00000522456 CPS1P31327 1500 aa33.5■■■□□ 2.95
HOXA3-205ENST00000522456 RRP7BPQ9NSQ0 103 aa33.5■■■□□ 2.95
HOXA3-205ENST00000522456 ILDR2Q71H61 639 aa33.49■■■□□ 2.95
HOXA3-205ENST00000522456 ERBINQ96RT1 1412 aa33.48■■■□□ 2.95
HOXA3-205ENST00000522456 DEPDC5O75140 1603 aa33.48■■■□□ 2.95
HOXA3-205ENST00000522456 ANKRD30AQ9BXX3 1397 aa33.47■■■□□ 2.95
HOXA3-205ENST00000522456 ERVK-7P63135 1459 aa33.46■■■□□ 2.95
HOXA3-205ENST00000522456 MED14O60244 1454 aa33.45■■■□□ 2.95
HOXA3-205ENST00000522456 CEP152O94986 1710 aa33.45■■■□□ 2.94
HOXA3-205ENST00000522456 NPHP4O75161 1426 aaPredicted RBP33.45■■■□□ 2.94
HOXA3-205ENST00000522456 VWDEQ8N2E2 1590 aa33.43■■■□□ 2.94
HOXA3-205ENST00000522456 ADGRL2O95490 1459 aa33.41■■■□□ 2.94
HOXA3-205ENST00000522456 IQGAP1P46940 1657 aa33.39■■■□□ 2.94
HOXA3-205ENST00000522456 ITGAEP38570 1179 aa33.39■■■□□ 2.94
HOXA3-205ENST00000522456 PRDM15P57071 1507 aaPredicted RBP33.37■■■□□ 2.93
HOXA3-205ENST00000522456 RRBP1Q9P2E9 1410 aaKnown RBP33.33■■■□□ 2.93
HOXA3-205ENST00000522456 SOCS7O14512 581 aa33.32■■■□□ 2.92
HOXA3-205ENST00000522456 TOM1O60784 492 aa33.32■■■□□ 2.92
HOXA3-205ENST00000522456 UBR1Q8IWV7 1749 aa33.32■■■□□ 2.92
HOXA3-205ENST00000522456 SCAF1Q9H7N4 1312 aaKnown RBP33.31■■■□□ 2.92
HOXA3-205ENST00000522456 ARHGAP31Q2M1Z3 1444 aa33.29■■■□□ 2.92
HOXA3-205ENST00000522456 PIP4K2BP78356 416 aa33.29■■■□□ 2.92
HOXA3-205ENST00000522456 CFAP65Q6ZU64 1925 aaKnown RBP33.29■■■□□ 2.92
HOXA3-205ENST00000522456 KANK1Q14678 1352 aa33.25■■■□□ 2.91
HOXA3-205ENST00000522456 SCAF11Q99590 1463 aaKnown RBP33.24■■■□□ 2.91
HOXA3-205ENST00000522456 HSPA1LP34931 641 aa33.23■■■□□ 2.91
HOXA3-205ENST00000522456 STRCP1A6NGW2 1772 aa33.22■■■□□ 2.91
HOXA3-205ENST00000522456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.22■■■□□ 2.91
HOXA3-205ENST00000522456 ROCK1Q13464 1354 aa33.21■■■□□ 2.91
HOXA3-205ENST00000522456 SYNMO15061 1565 aa33.21■■■□□ 2.91
HOXA3-205ENST00000522456 ANKRD50Q9ULJ7 1429 aa33.2■■■□□ 2.91
HOXA3-205ENST00000522456 ARHGAP23Q9P227 1491 aa33.2■■■□□ 2.91
HOXA3-205ENST00000522456 SLIT1O75093 1534 aa33.2■■■□□ 2.91
HOXA3-205ENST00000522456 ALKQ9UM73 1620 aa33.19■■■□□ 2.9
HOXA3-205ENST00000522456 LRRC7Q96NW7 1537 aa33.18■■■□□ 2.9
HOXA3-205ENST00000522456 PIK3C2BO00750 1634 aa33.15■■■□□ 2.9
HOXA3-205ENST00000522456 LMTK2Q8IWU2 1503 aa33.15■■■□□ 2.9
HOXA3-205ENST00000522456 LTKP29376 864 aa33.13■■■□□ 2.89
HOXA3-205ENST00000522456 TXNDC2Q86VQ3 553 aa33.13■■■□□ 2.89
HOXA3-205ENST00000522456 MED1Q15648 1581 aaPredicted RBP33.12■■■□□ 2.89
HOXA3-205ENST00000522456 EID1Q9Y6B2 187 aa33.09■■■□□ 2.89
HOXA3-205ENST00000522456 KDM5AP29375 1690 aaKnown RBP33.07■■■□□ 2.89
HOXA3-205ENST00000522456 TMEM2Q9UHN6 1383 aa33.07■■■□□ 2.88
HOXA3-205ENST00000522456 STAG3Q9UJ98 1225 aa33.06■■■□□ 2.88
HOXA3-205ENST00000522456 EFCAB6Q5THR3 1501 aa33.06■■■□□ 2.88
HOXA3-205ENST00000522456 UNC13BO14795 1591 aa33.04■■■□□ 2.88
HOXA3-205ENST00000522456 IDI1Q13907 227 aa33■■■□□ 2.87
HOXA3-205ENST00000522456 NOS1P29475 1434 aa33■■■□□ 2.87
HOXA3-205ENST00000522456 RPRD2Q5VT52 1461 aaKnown RBP32.97■■■□□ 2.87
HOXA3-205ENST00000522456 TET3O43151 1660 aa32.97■■■□□ 2.87
HOXA3-205ENST00000522456 ADGRB3O60242 1522 aa32.97■■■□□ 2.87
HOXA3-205ENST00000522456 XIRP1Q702N8 1843 aaKnown RBP32.95■■■□□ 2.86
HOXA3-205ENST00000522456 SENP3Q9H4L4 574 aaPredicted RBP32.93■■■□□ 2.86
HOXA3-205ENST00000522456 NAIPQ13075 1403 aa32.93■■■□□ 2.86
HOXA3-205ENST00000522456 GCC2Q8IWJ2 1684 aa32.92■■■□□ 2.86
HOXA3-205ENST00000522456 IQGAP3Q86VI3 1631 aa32.91■■■□□ 2.86
HOXA3-205ENST00000522456 NUP155O75694 1391 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms