RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
SH2D4A-205ENST00000522328 MROH2AA6NES4 1674 aa11.02□□□□□ -0.64
SH2D4A-205ENST00000522328 ATP7AQ04656 1500 aa11.02□□□□□ -0.65
SH2D4A-205ENST00000522328 STRCQ7RTU9 1775 aa11.02□□□□□ -0.65
SH2D4A-205ENST00000522328 INO80Q9ULG1 1556 aaPredicted RBP11.01□□□□□ -0.65
SH2D4A-205ENST00000522328 PLXNC1O60486 1568 aa11□□□□□ -0.65
SH2D4A-205ENST00000522328 HNRNPMP52272 730 aaKnown RBP eCLIP11□□□□□ -0.65
SH2D4A-205ENST00000522328 A2MP01023 1474 aa11□□□□□ -0.65
SH2D4A-205ENST00000522328 EHBP1L1Q8N3D4 1523 aa10.99□□□□□ -0.65
SH2D4A-205ENST00000522328 ZMYM3Q14202 1370 aa10.99□□□□□ -0.65
SH2D4A-205ENST00000522328 NCOA1Q15788 1441 aa10.99□□□□□ -0.65
SH2D4A-205ENST00000522328 CEP162Q5TB80 1403 aa10.98□□□□□ -0.65
SH2D4A-205ENST00000522328 RTEL1-TNFRSF6BF6WH68 1400 aa10.97□□□□□ -0.65
SH2D4A-205ENST00000522328 IQSEC2Q5JU85 1478 aa10.97□□□□□ -0.65
SH2D4A-205ENST00000522328 TIAM1Q13009 1591 aa10.97□□□□□ -0.65
SH2D4A-205ENST00000522328 SUPT6HQ7KZ85 1726 aaKnown RBP10.96□□□□□ -0.65
SH2D4A-205ENST00000522328 ADGBQ8N7X0 1667 aa10.96□□□□□ -0.65
SH2D4A-205ENST00000522328 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
SH2D4A-205ENST00000522328 PLA2R1Q13018 1463 aa10.94□□□□□ -0.66
SH2D4A-205ENST00000522328 MBD5Q9P267 1494 aa10.94□□□□□ -0.66
SH2D4A-205ENST00000522328 POTEDQ86YR6 584 aa10.94□□□□□ -0.66
SH2D4A-205ENST00000522328 ZNF142P52746 1687 aaPredicted RBP10.94□□□□□ -0.66
SH2D4A-205ENST00000522328 CLTCQ00610 1675 aaKnown RBP10.94□□□□□ -0.66
SH2D4A-205ENST00000522328 FAM135AQ9P2D6 1515 aa10.94□□□□□ -0.66
SH2D4A-205ENST00000522328 PTPRKQ15262 1439 aa10.93□□□□□ -0.66
SH2D4A-205ENST00000522328 RSPH4AQ5TD94 716 aa10.93□□□□□ -0.66
SH2D4A-205ENST00000522328 GGT6Q6P531 493 aa10.93□□□□□ -0.66
SH2D4A-205ENST00000522328 LTBP4Q8N2S1 1624 aa10.93□□□□□ -0.66
SH2D4A-205ENST00000522328 MYO3AQ8NEV4 1616 aa10.92□□□□□ -0.66
SH2D4A-205ENST00000522328 PKD2Q13563 968 aa10.92□□□□□ -0.66
SH2D4A-205ENST00000522328 ZBTB12Q9Y330 459 aaPredicted RBP10.92□□□□□ -0.66
SH2D4A-205ENST00000522328 CCDC141Q6ZP82 1450 aa10.92□□□□□ -0.66
SH2D4A-205ENST00000522328 DHX29Q7Z478 1369 aaKnown RBP10.91□□□□□ -0.66
SH2D4A-205ENST00000522328 CEP170BQ9Y4F5 1589 aaPredicted RBP10.91□□□□□ -0.66
SH2D4A-205ENST00000522328 ZNF644Q9H582 1327 aaPredicted RBP10.91□□□□□ -0.66
SH2D4A-205ENST00000522328 ABCB7O75027 752 aa10.91□□□□□ -0.66
SH2D4A-205ENST00000522328 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
SH2D4A-205ENST00000522328 TCOF1Q13428 1488 aaKnown RBP10.9□□□□□ -0.66
SH2D4A-205ENST00000522328 NCOA2Q15596 1464 aa10.9□□□□□ -0.66
SH2D4A-205ENST00000522328 CAMSAP2Q08AD1 1489 aa10.89□□□□□ -0.67
SH2D4A-205ENST00000522328 A2ML1A8K2U0 1454 aa10.88□□□□□ -0.67
SH2D4A-205ENST00000522328 KDM5DQ9BY66 1539 aa10.88□□□□□ -0.67
SH2D4A-205ENST00000522328 NCKAP5LQ9HCH0 1330 aa10.87□□□□□ -0.67
SH2D4A-205ENST00000522328 ARHGEF5Q12774 1597 aa10.87□□□□□ -0.67
SH2D4A-205ENST00000522328 PZPP20742 1482 aa10.87□□□□□ -0.67
SH2D4A-205ENST00000522328 KIF3BO15066 747 aa10.86□□□□□ -0.67
SH2D4A-205ENST00000522328 TSPY4P0CV99 314 aa10.86□□□□□ -0.67
SH2D4A-205ENST00000522328 TSPY10P0CW01 314 aa10.86□□□□□ -0.67
SH2D4A-205ENST00000522328 TNRQ92752 1358 aa10.86□□□□□ -0.67
SH2D4A-205ENST00000522328 VPS8Q8N3P4 1428 aa10.85□□□□□ -0.67
SH2D4A-205ENST00000522328 DISP3Q9P2K9 1392 aa10.85□□□□□ -0.67
SH2D4A-205ENST00000522328 ZNF335Q9H4Z2 1342 aaPredicted RBP10.84□□□□□ -0.67
SH2D4A-205ENST00000522328 WASHC2CQ9Y4E1 1318 aa10.84□□□□□ -0.67
SH2D4A-205ENST00000522328 DNMT1P26358 1616 aaKnown RBP10.84□□□□□ -0.67
SH2D4A-205ENST00000522328 LRRC9Q6ZRR7 1453 aa10.84□□□□□ -0.67
SH2D4A-205ENST00000522328 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
SH2D4A-205ENST00000522328 NLRP1Q9C000 1473 aa10.83□□□□□ -0.68
SH2D4A-205ENST00000522328 MAST1Q9Y2H9 1570 aa10.82□□□□□ -0.68
SH2D4A-205ENST00000522328 MIA2Q96PC5 1412 aa10.82□□□□□ -0.68
SH2D4A-205ENST00000522328 SPATA31D1Q6ZQQ2 1576 aa10.82□□□□□ -0.68
SH2D4A-205ENST00000522328 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
SH2D4A-205ENST00000522328 IFNLR1Q8IU57 520 aaPredicted RBP10.81□□□□□ -0.68
SH2D4A-205ENST00000522328 POLR1AO95602 1720 aaPredicted RBP10.81□□□□□ -0.68
SH2D4A-205ENST00000522328 RNF17Q9BXT8 1623 aaKnown RBP10.8□□□□□ -0.68
SH2D4A-205ENST00000522328 CPS1P31327 1500 aa10.8□□□□□ -0.68
SH2D4A-205ENST00000522328 ZC3H13Q5T200 1668 aaKnown RBP10.8□□□□□ -0.68
SH2D4A-205ENST00000522328 FBXO31Q5XUX0 539 aaPredicted RBP10.8□□□□□ -0.68
SH2D4A-205ENST00000522328 THEMISQ8N1K5 641 aaPredicted RBP10.8□□□□□ -0.68
SH2D4A-205ENST00000522328 EIF2AK4Q9P2K8 1649 aaKnown RBP10.8□□□□□ -0.68
SH2D4A-205ENST00000522328 NEURL4Q96JN8 1562 aa10.79□□□□□ -0.68
SH2D4A-205ENST00000522328 UGGT1Q9NYU2 1555 aa10.79□□□□□ -0.68
SH2D4A-205ENST00000522328 MYOM3Q5VTT5 1437 aa10.79□□□□□ -0.68
SH2D4A-205ENST00000522328 DSG3P32926 999 aa10.79□□□□□ -0.68
SH2D4A-205ENST00000522328 ANKLE2Q86XL3 938 aa10.79□□□□□ -0.68
SH2D4A-205ENST00000522328 MED14O60244 1454 aa10.78□□□□□ -0.68
SH2D4A-205ENST00000522328 SHANK2Q9UPX8 1470 aa10.78□□□□□ -0.68
SH2D4A-205ENST00000522328 ABCC3O15438 1527 aa10.78□□□□□ -0.68
SH2D4A-205ENST00000522328 DEPDC5O75140 1603 aa10.77□□□□□ -0.68
SH2D4A-205ENST00000522328 SOCS7O14512 581 aa10.77□□□□□ -0.69
SH2D4A-205ENST00000522328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.77□□□□□ -0.69
SH2D4A-205ENST00000522328 DUOX2Q9NRD8 1548 aa10.76□□□□□ -0.69
SH2D4A-205ENST00000522328 ILDR2Q71H61 639 aa10.76□□□□□ -0.69
SH2D4A-205ENST00000522328 NPHP4O75161 1426 aaPredicted RBP10.75□□□□□ -0.69
SH2D4A-205ENST00000522328 ERVK-7P63135 1459 aa10.75□□□□□ -0.69
SH2D4A-205ENST00000522328 TOM1O60784 492 aa10.75□□□□□ -0.69
SH2D4A-205ENST00000522328 MROH1Q8NDA8 1641 aa10.74□□□□□ -0.69
SH2D4A-205ENST00000522328 KANK4Q5T7N3 995 aaPredicted RBP10.74□□□□□ -0.69
SH2D4A-205ENST00000522328 ERBINQ96RT1 1412 aa10.74□□□□□ -0.69
SH2D4A-205ENST00000522328 VWDEQ8N2E2 1590 aa10.73□□□□□ -0.69
SH2D4A-205ENST00000522328 LOC105371045A0A1W2PR82 267 aa10.73□□□□□ -0.69
SH2D4A-205ENST00000522328 ARHGAP31Q2M1Z3 1444 aa10.73□□□□□ -0.69
SH2D4A-205ENST00000522328 PRDM15P57071 1507 aaPredicted RBP10.73□□□□□ -0.69
SH2D4A-205ENST00000522328 IQGAP1P46940 1657 aa10.73□□□□□ -0.69
SH2D4A-205ENST00000522328 KIF15Q9NS87 1388 aa10.72□□□□□ -0.69
SH2D4A-205ENST00000522328 CROCC2H7BZ55 1655 aa10.7□□□□□ -0.7
SH2D4A-205ENST00000522328 SYNMO15061 1565 aa10.7□□□□□ -0.7
SH2D4A-205ENST00000522328 ABCC5O15440 1437 aa10.7□□□□□ -0.7
SH2D4A-205ENST00000522328 CEP152O94986 1710 aa10.7□□□□□ -0.7
SH2D4A-205ENST00000522328 PTPN23Q9H3S7 1636 aa10.69□□□□□ -0.7
SH2D4A-205ENST00000522328 SCAF11Q99590 1463 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms