RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
CTNNA1-234ENST00000522227 EEA1Q15075 1411 aa18.39■□□□□ 0.53
CTNNA1-234ENST00000522227 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
CTNNA1-234ENST00000522227 RNF17Q9BXT8 1623 aaKnown RBP18.38■□□□□ 0.53
CTNNA1-234ENST00000522227 STRCP1A6NGW2 1772 aa18.37■□□□□ 0.53
CTNNA1-234ENST00000522227 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
CTNNA1-234ENST00000522227 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
CTNNA1-234ENST00000522227 IQGAP1P46940 1657 aa18.32■□□□□ 0.52
CTNNA1-234ENST00000522227 UGGT1Q9NYU2 1555 aa18.32■□□□□ 0.52
CTNNA1-234ENST00000522227 FAM135AQ9P2D6 1515 aa18.32■□□□□ 0.52
CTNNA1-234ENST00000522227 MED14O60244 1454 aa18.32■□□□□ 0.52
CTNNA1-234ENST00000522227 KIF3BO15066 747 aa18.31■□□□□ 0.52
CTNNA1-234ENST00000522227 CFDP1Q9UEE9 299 aaPredicted RBP18.31■□□□□ 0.52
CTNNA1-234ENST00000522227 GPATCH8Q9UKJ3 1502 aaKnown RBP18.29■□□□□ 0.52
CTNNA1-234ENST00000522227 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
CTNNA1-234ENST00000522227 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
CTNNA1-234ENST00000522227 PZPP20742 1482 aa18.28■□□□□ 0.52
CTNNA1-234ENST00000522227 MIA2Q96PC5 1412 aa18.28■□□□□ 0.52
CTNNA1-234ENST00000522227 SYNMO15061 1565 aa18.28■□□□□ 0.52
CTNNA1-234ENST00000522227 ADGBQ8N7X0 1667 aa18.28■□□□□ 0.52
CTNNA1-234ENST00000522227 CCDC18Q5T9S5 1454 aa18.27■□□□□ 0.52
CTNNA1-234ENST00000522227 UPF1Q92900 1129 aaKnown RBP eCLIP18.27■□□□□ 0.52
CTNNA1-234ENST00000522227 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
CTNNA1-234ENST00000522227 KIAA1107Q9UPP5 1409 aa18.25■□□□□ 0.51
CTNNA1-234ENST00000522227 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
CTNNA1-234ENST00000522227 PLEKHH2Q8IVE3 1493 aa18.25■□□□□ 0.51
CTNNA1-234ENST00000522227 NLRP1Q9C000 1473 aa18.25■□□□□ 0.51
CTNNA1-234ENST00000522227 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
CTNNA1-234ENST00000522227 CASKIN1Q8WXD9 1431 aa18.23■□□□□ 0.51
CTNNA1-234ENST00000522227 DHX29Q7Z478 1369 aaKnown RBP18.22■□□□□ 0.51
CTNNA1-234ENST00000522227 CCNB3Q8WWL7 1395 aa18.22■□□□□ 0.51
CTNNA1-234ENST00000522227 FAM135BQ49AJ0 1406 aa18.21■□□□□ 0.51
CTNNA1-234ENST00000522227 RBM33Q96EV2 1170 aaKnown RBP18.2■□□□□ 0.5
CTNNA1-234ENST00000522227 XIRP1Q702N8 1843 aaKnown RBP18.19■□□□□ 0.5
CTNNA1-234ENST00000522227 ZC3H13Q5T200 1668 aaKnown RBP18.17■□□□□ 0.5
CTNNA1-234ENST00000522227 ROBO1Q9Y6N7 1651 aa18.15■□□□□ 0.5
CTNNA1-234ENST00000522227 LTKP29376 864 aa18.15■□□□□ 0.5
CTNNA1-234ENST00000522227 TXNDC2Q86VQ3 553 aa18.15■□□□□ 0.5
CTNNA1-234ENST00000522227 MEX3CQ5U5Q3 659 aaKnown RBP18.13■□□□□ 0.49
CTNNA1-234ENST00000522227 TMEM94Q12767 1356 aa18.13■□□□□ 0.49
CTNNA1-234ENST00000522227 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
CTNNA1-234ENST00000522227 RTEL1-TNFRSF6BF6WH68 1400 aa18.12■□□□□ 0.49
CTNNA1-234ENST00000522227 MBD5Q9P267 1494 aa18.11■□□□□ 0.49
CTNNA1-234ENST00000522227 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
CTNNA1-234ENST00000522227 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
CTNNA1-234ENST00000522227 MTUS2Q5JR59 1369 aa18.08■□□□□ 0.49
CTNNA1-234ENST00000522227 JCADQ9P266 1359 aa18.08■□□□□ 0.49
CTNNA1-234ENST00000522227 CFAP65Q6ZU64 1925 aaKnown RBP18.08■□□□□ 0.48
CTNNA1-234ENST00000522227 PHLPP1O60346 1717 aa18.07■□□□□ 0.48
CTNNA1-234ENST00000522227 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
CTNNA1-234ENST00000522227 ZNF772Q68DY9 489 aaPredicted RBP18.06■□□□□ 0.48
CTNNA1-234ENST00000522227 EID1Q9Y6B2 187 aa18.06■□□□□ 0.48
CTNNA1-234ENST00000522227 UBR1Q8IWV7 1749 aa18.06■□□□□ 0.48
CTNNA1-234ENST00000522227 RXRBP28702 533 aa18.05■□□□□ 0.48
CTNNA1-234ENST00000522227 NCOA2Q15596 1464 aa18.05■□□□□ 0.48
CTNNA1-234ENST00000522227 LRP6O75581 1613 aa18.04■□□□□ 0.48
CTNNA1-234ENST00000522227 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
CTNNA1-234ENST00000522227 SLC26A8Q96RN1 970 aa18.03■□□□□ 0.48
CTNNA1-234ENST00000522227 SLAIN2Q9P270 581 aa18.02■□□□□ 0.48
CTNNA1-234ENST00000522227 ABCC3O15438 1527 aa18.02■□□□□ 0.47
CTNNA1-234ENST00000522227 MAP3K1Q13233 1512 aa18.02■□□□□ 0.47
CTNNA1-234ENST00000522227 CCDC141Q6ZP82 1450 aa18.01■□□□□ 0.47
CTNNA1-234ENST00000522227 KCNA6P17658 529 aa18.01■□□□□ 0.47
CTNNA1-234ENST00000522227 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
CTNNA1-234ENST00000522227 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
CTNNA1-234ENST00000522227 ARHGAP23Q9P227 1491 aa18■□□□□ 0.47
CTNNA1-234ENST00000522227 NUTM2BA6NNL0 878 aaPredicted RBP17.99■□□□□ 0.47
CTNNA1-234ENST00000522227 NUTM2EB1AL46 878 aaPredicted RBP17.99■□□□□ 0.47
CTNNA1-234ENST00000522227 NUTM2AQ8IVF1 878 aaPredicted RBP17.99■□□□□ 0.47
CTNNA1-234ENST00000522227 MSH6P52701 1360 aa17.99■□□□□ 0.47
CTNNA1-234ENST00000522227 SLIT1O75093 1534 aa17.98■□□□□ 0.47
CTNNA1-234ENST00000522227 BCANQ96GW7 911 aa17.97■□□□□ 0.47
CTNNA1-234ENST00000522227 SPATA31A6Q5VVP1 1343 aa17.97■□□□□ 0.47
CTNNA1-234ENST00000522227 CAMSAP2Q08AD1 1489 aa17.95■□□□□ 0.46
CTNNA1-234ENST00000522227 CEP152O94986 1710 aa17.95■□□□□ 0.46
CTNNA1-234ENST00000522227 TSPY4P0CV99 314 aa17.95■□□□□ 0.46
CTNNA1-234ENST00000522227 TSPY10P0CW01 314 aa17.95■□□□□ 0.46
CTNNA1-234ENST00000522227 COL16A1Q07092 1604 aaPredicted RBP17.94■□□□□ 0.46
CTNNA1-234ENST00000522227 NUTM2DQ5VT03 806 aaPredicted RBP17.94■□□□□ 0.46
CTNNA1-234ENST00000522227 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
CTNNA1-234ENST00000522227 TMEM2Q9UHN6 1383 aa17.93■□□□□ 0.46
CTNNA1-234ENST00000522227 SRCAPQ6ZRS2 3230 aa17.93■□□□□ 0.46
CTNNA1-234ENST00000522227 AFF2P51816 1311 aa17.92■□□□□ 0.46
CTNNA1-234ENST00000522227 RSPH4AQ5TD94 716 aa17.91■□□□□ 0.46
CTNNA1-234ENST00000522227 PIK3C2BO00750 1634 aa17.9■□□□□ 0.46
CTNNA1-234ENST00000522227 C14orf37Q86TY3 774 aa17.9■□□□□ 0.46
CTNNA1-234ENST00000522227 FGD6Q6ZV73 1430 aa17.88■□□□□ 0.45
CTNNA1-234ENST00000522227 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
CTNNA1-234ENST00000522227 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
CTNNA1-234ENST00000522227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.45
CTNNA1-234ENST00000522227 ZRANB1Q9UGI0 708 aa17.87■□□□□ 0.45
CTNNA1-234ENST00000522227 RGS12O14924 1447 aa17.87■□□□□ 0.45
CTNNA1-234ENST00000522227 NKTRP30414 1462 aaKnown RBP17.87■□□□□ 0.45
CTNNA1-234ENST00000522227 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
CTNNA1-234ENST00000522227 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
CTNNA1-234ENST00000522227 TET3O43151 1660 aa17.84■□□□□ 0.45
CTNNA1-234ENST00000522227 QTRT2Q9H974 415 aaKnown RBP17.84■□□□□ 0.45
CTNNA1-234ENST00000522227 NWD1Q149M9 1564 aa17.83■□□□□ 0.45
CTNNA1-234ENST00000522227 EFCAB6Q5THR3 1501 aa17.83■□□□□ 0.45
CTNNA1-234ENST00000522227 IDI1Q13907 227 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms