RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 TERF2IPQ9NYB0 399 aa14.12□□□□□ -0.15
LAMA4-219ENST00000522006 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
LAMA4-219ENST00000522006 SF3A1Q15459 793 aaKnown RBP14.12□□□□□ -0.15
LAMA4-219ENST00000522006 CECR2Q9BXF3 1484 aa14.11□□□□□ -0.15
LAMA4-219ENST00000522006 LMOD3Q0VAK6 560 aa14.11□□□□□ -0.15
LAMA4-219ENST00000522006 NLRP13Q86W25 1043 aa14.11□□□□□ -0.15
LAMA4-219ENST00000522006 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
LAMA4-219ENST00000522006 FMN1Q68DA7 1419 aa14.11□□□□□ -0.15
LAMA4-219ENST00000522006 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
LAMA4-219ENST00000522006 H3BQV1 296 aa14.1□□□□□ -0.15
LAMA4-219ENST00000522006 IFFO2Q5TF58 517 aa14.1□□□□□ -0.15
LAMA4-219ENST00000522006 PHLDB1Q86UU1 1377 aa14.1□□□□□ -0.15
LAMA4-219ENST00000522006 KIF15Q9NS87 1388 aa14.09□□□□□ -0.15
LAMA4-219ENST00000522006 KIF3AQ9Y496 699 aa14.09□□□□□ -0.15
LAMA4-219ENST00000522006 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
LAMA4-219ENST00000522006 SLC4A3P48751 1232 aa14.09□□□□□ -0.15
LAMA4-219ENST00000522006 CENPQQ7L2Z9 268 aaPredicted RBP14.09□□□□□ -0.15
LAMA4-219ENST00000522006 RSPH6AQ9H0K4 717 aa14.09□□□□□ -0.15
LAMA4-219ENST00000522006 PES1O00541 588 aaKnown RBP14.08□□□□□ -0.15
LAMA4-219ENST00000522006 RILPL2Q969X0 211 aa14.08□□□□□ -0.16
LAMA4-219ENST00000522006 TPD52L1Q16890 204 aaPredicted RBP14.08□□□□□ -0.16
LAMA4-219ENST00000522006 FAM161AQ3B820 660 aa14.08□□□□□ -0.16
LAMA4-219ENST00000522006 CEP89Q96ST8 783 aa14.08□□□□□ -0.16
LAMA4-219ENST00000522006 RRP7AQ9Y3A4 280 aaKnown RBP14.08□□□□□ -0.16
LAMA4-219ENST00000522006 CARMIL2Q6F5E8 1435 aa14.08□□□□□ -0.16
LAMA4-219ENST00000522006 L3MBTL2Q969R5 705 aa14.08□□□□□ -0.16
LAMA4-219ENST00000522006 DDX49Q9Y6V7 483 aaKnown RBP14.08□□□□□ -0.16
LAMA4-219ENST00000522006 NUTM2DQ5VT03 806 aaPredicted RBP14.07□□□□□ -0.16
LAMA4-219ENST00000522006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.07□□□□□ -0.16
LAMA4-219ENST00000522006 MYBBP1AQ9BQG0 1328 aaKnown RBP14.07□□□□□ -0.16
LAMA4-219ENST00000522006 MARCH6O60337 910 aa14.07□□□□□ -0.16
LAMA4-219ENST00000522006 SETQ01105 290 aaPredicted RBP14.07□□□□□ -0.16
LAMA4-219ENST00000522006 VPS53Q5VIR6 699 aa14.07□□□□□ -0.16
LAMA4-219ENST00000522006 PDE4AP27815 886 aa14.06□□□□□ -0.16
LAMA4-219ENST00000522006 GSE1Q14687 1217 aa14.06□□□□□ -0.16
LAMA4-219ENST00000522006 SKOR2Q2VWA4 1001 aaPredicted RBP14.06□□□□□ -0.16
LAMA4-219ENST00000522006 FOXD4L6Q3SYB3 417 aaPredicted RBP14.06□□□□□ -0.16
LAMA4-219ENST00000522006 FOXD4L3Q6VB84 417 aaPredicted RBP14.06□□□□□ -0.16
LAMA4-219ENST00000522006 GOLGA6L19H0YKK7 550 aa14.06□□□□□ -0.16
LAMA4-219ENST00000522006 ANKRD45Q5TZF3 282 aa14.06□□□□□ -0.16
LAMA4-219ENST00000522006 G3V3G9 751 aa14.06□□□□□ -0.16
LAMA4-219ENST00000522006 AMPHP49418 695 aa14.06□□□□□ -0.16
LAMA4-219ENST00000522006 DCAF8Q5TAQ9 597 aa14.06□□□□□ -0.16
LAMA4-219ENST00000522006 FAM184AQ8NB25 1140 aa14.05□□□□□ -0.16
LAMA4-219ENST00000522006 CCAR2Q8N163 923 aaKnown RBP14.05□□□□□ -0.16
LAMA4-219ENST00000522006 PLIN1O60240 522 aa14.05□□□□□ -0.16
LAMA4-219ENST00000522006 CCDC9Q9Y3X0 531 aaKnown RBP14.05□□□□□ -0.16
LAMA4-219ENST00000522006 LTV1Q96GA3 475 aaPredicted RBP14.05□□□□□ -0.16
LAMA4-219ENST00000522006 FRAT2O75474 233 aaPredicted RBP14.03□□□□□ -0.16
LAMA4-219ENST00000522006 TSR1Q2NL82 804 aaKnown RBP14.03□□□□□ -0.16
LAMA4-219ENST00000522006 NGDNQ8NEJ9 315 aaKnown RBP14.03□□□□□ -0.16
LAMA4-219ENST00000522006 BCL2L13Q9BXK5 485 aa14.03□□□□□ -0.16
LAMA4-219ENST00000522006 CRBNQ96SW2 442 aa14.03□□□□□ -0.16
LAMA4-219ENST00000522006 ANO8Q9HCE9 1232 aaPredicted RBP14.03□□□□□ -0.16
LAMA4-219ENST00000522006 ATP6V1DQ9Y5K8 247 aa14.03□□□□□ -0.16
LAMA4-219ENST00000522006 BECN2A8MW95 431 aa14.02□□□□□ -0.16
LAMA4-219ENST00000522006 KIF3BO15066 747 aa14.02□□□□□ -0.16
LAMA4-219ENST00000522006 RRP1P56182 461 aaKnown RBP14.02□□□□□ -0.16
LAMA4-219ENST00000522006 EXOC6Q8TAG9 804 aa14.02□□□□□ -0.16
LAMA4-219ENST00000522006 EFCAB2Q5VUJ9 269 aa14.02□□□□□ -0.17
LAMA4-219ENST00000522006 HNRNPMP52272 730 aaKnown RBP eCLIP14.02□□□□□ -0.17
LAMA4-219ENST00000522006 TPM2P07951 284 aa14.01□□□□□ -0.17
LAMA4-219ENST00000522006 ZNF592Q92610 1267 aa14.01□□□□□ -0.17
LAMA4-219ENST00000522006 PANK3Q9H999 370 aa14□□□□□ -0.17
LAMA4-219ENST00000522006 ZKSCAN2Q63HK3 967 aa14□□□□□ -0.17
LAMA4-219ENST00000522006 TPM1P09493 284 aa14□□□□□ -0.17
LAMA4-219ENST00000522006 MCTP1Q6DN14 999 aa14□□□□□ -0.17
LAMA4-219ENST00000522006 ELL2O00472 640 aaPredicted RBP14□□□□□ -0.17
LAMA4-219ENST00000522006 ZNF771Q7L3S4 317 aaPredicted RBP13.99□□□□□ -0.17
LAMA4-219ENST00000522006 GPS2Q13227 327 aa13.99□□□□□ -0.17
LAMA4-219ENST00000522006 E9PSI1 815 aa13.99□□□□□ -0.17
LAMA4-219ENST00000522006 AKAP17AQ02040 695 aaKnown RBP13.99□□□□□ -0.17
LAMA4-219ENST00000522006 TRAK1Q9UPV9 953 aa13.99□□□□□ -0.17
LAMA4-219ENST00000522006 CCDC70Q6NSX1 233 aa13.99□□□□□ -0.17
LAMA4-219ENST00000522006 VSIG10Q8N0Z9 540 aa13.98□□□□□ -0.17
LAMA4-219ENST00000522006 CHMP4CQ96CF2 233 aa13.98□□□□□ -0.17
LAMA4-219ENST00000522006 DIAPH3Q9NSV4 1193 aa13.97□□□□□ -0.17
LAMA4-219ENST00000522006 CCDC88BA6NC98 1476 aa13.97□□□□□ -0.17
LAMA4-219ENST00000522006 NUTM2FA1L443 756 aa13.97□□□□□ -0.17
LAMA4-219ENST00000522006 EID1Q9Y6B2 187 aa13.97□□□□□ -0.17
LAMA4-219ENST00000522006 COG6Q9Y2V7 657 aa13.97□□□□□ -0.17
LAMA4-219ENST00000522006 GTF2E1P29083 439 aaPredicted RBP13.97□□□□□ -0.17
LAMA4-219ENST00000522006 PATL2C9JE40 543 aaKnown RBP13.96□□□□□ -0.17
LAMA4-219ENST00000522006 ANO2Q9NQ90 1003 aa13.96□□□□□ -0.17
LAMA4-219ENST00000522006 SYNE3Q6ZMZ3 975 aa13.96□□□□□ -0.18
LAMA4-219ENST00000522006 ST20-MTHFSA0A0A6YYL1 179 aa13.95□□□□□ -0.18
LAMA4-219ENST00000522006 WASHC2CQ9Y4E1 1318 aa13.95□□□□□ -0.18
LAMA4-219ENST00000522006 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
LAMA4-219ENST00000522006 CCDC18Q5T9S5 1454 aa13.95□□□□□ -0.18
LAMA4-219ENST00000522006 PCMTD1Q96MG8 357 aaPredicted RBP13.95□□□□□ -0.18
LAMA4-219ENST00000522006 C1orf141Q5JVX7 400 aa13.94□□□□□ -0.18
LAMA4-219ENST00000522006 FHOD3Q2V2M9 1422 aa13.94□□□□□ -0.18
LAMA4-219ENST00000522006 TRIM29Q14134 588 aa13.93□□□□□ -0.18
LAMA4-219ENST00000522006 CGNL1Q0VF96 1302 aa13.93□□□□□ -0.18
LAMA4-219ENST00000522006 CCDC144AA2RUR9 1427 aa13.93□□□□□ -0.18
LAMA4-219ENST00000522006 RUFY2Q8WXA3 655 aa13.93□□□□□ -0.18
LAMA4-219ENST00000522006 REC8O95072 547 aa13.93□□□□□ -0.18
LAMA4-219ENST00000522006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.92□□□□□ -0.18
LAMA4-219ENST00000522006 COG3Q96JB2 828 aa13.92□□□□□ -0.18
LAMA4-219ENST00000522006 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms