RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 ZNF142P52746 1687 aaPredicted RBP13.78□□□□□ -0.2
NPIPB3-205ENST00000521589 PZPP20742 1482 aa13.77□□□□□ -0.21
NPIPB3-205ENST00000521589 RNF17Q9BXT8 1623 aaKnown RBP13.77□□□□□ -0.21
NPIPB3-205ENST00000521589 SHANK2Q9UPX8 1470 aa13.77□□□□□ -0.21
NPIPB3-205ENST00000521589 CEP170BQ9Y4F5 1589 aaPredicted RBP13.76□□□□□ -0.21
NPIPB3-205ENST00000521589 TCOF1Q13428 1488 aaKnown RBP13.76□□□□□ -0.21
NPIPB3-205ENST00000521589 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
NPIPB3-205ENST00000521589 PTPN23Q9H3S7 1636 aa13.75□□□□□ -0.21
NPIPB3-205ENST00000521589 EIF2AK4Q9P2K8 1649 aaKnown RBP13.75□□□□□ -0.21
NPIPB3-205ENST00000521589 PLA2R1Q13018 1463 aa13.75□□□□□ -0.21
NPIPB3-205ENST00000521589 ABCC5O15440 1437 aa13.75□□□□□ -0.21
NPIPB3-205ENST00000521589 CAMSAP1Q5T5Y3 1602 aa13.75□□□□□ -0.21
NPIPB3-205ENST00000521589 CERKQ8TCT0 537 aa13.74□□□□□ -0.21
NPIPB3-205ENST00000521589 DUOX2Q9NRD8 1548 aa13.74□□□□□ -0.21
NPIPB3-205ENST00000521589 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
NPIPB3-205ENST00000521589 WASHC2CQ9Y4E1 1318 aa13.73□□□□□ -0.21
NPIPB3-205ENST00000521589 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
NPIPB3-205ENST00000521589 MROH1Q8NDA8 1641 aa13.72□□□□□ -0.21
NPIPB3-205ENST00000521589 ABCC3O15438 1527 aa13.72□□□□□ -0.21
NPIPB3-205ENST00000521589 DAPK1P53355 1430 aa13.72□□□□□ -0.21
NPIPB3-205ENST00000521589 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
NPIPB3-205ENST00000521589 TNRQ92752 1358 aa13.71□□□□□ -0.21
NPIPB3-205ENST00000521589 KIF15Q9NS87 1388 aa13.71□□□□□ -0.21
NPIPB3-205ENST00000521589 ZC3H13Q5T200 1668 aaKnown RBP13.71□□□□□ -0.21
NPIPB3-205ENST00000521589 PKD2Q13563 968 aa13.7□□□□□ -0.22
NPIPB3-205ENST00000521589 FBXO31Q5XUX0 539 aaPredicted RBP13.7□□□□□ -0.22
NPIPB3-205ENST00000521589 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
NPIPB3-205ENST00000521589 LTBP4Q8N2S1 1624 aa13.68□□□□□ -0.22
NPIPB3-205ENST00000521589 NLRP1Q9C000 1473 aa13.68□□□□□ -0.22
NPIPB3-205ENST00000521589 PRDM15P57071 1507 aaPredicted RBP13.68□□□□□ -0.22
NPIPB3-205ENST00000521589 SPATA31D1Q6ZQQ2 1576 aa13.67□□□□□ -0.22
NPIPB3-205ENST00000521589 NCKAP5LQ9HCH0 1330 aa13.66□□□□□ -0.22
NPIPB3-205ENST00000521589 ADGRL2O95490 1459 aa13.66□□□□□ -0.22
NPIPB3-205ENST00000521589 ARHGAP31Q2M1Z3 1444 aa13.65□□□□□ -0.22
NPIPB3-205ENST00000521589 DEPDC5O75140 1603 aa13.65□□□□□ -0.22
NPIPB3-205ENST00000521589 RRP7BPQ9NSQ0 103 aa13.65□□□□□ -0.22
NPIPB3-205ENST00000521589 ANKRD30AQ9BXX3 1397 aa13.65□□□□□ -0.22
NPIPB3-205ENST00000521589 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
NPIPB3-205ENST00000521589 IQSEC2Q5JU85 1478 aa13.65□□□□□ -0.22
NPIPB3-205ENST00000521589 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
NPIPB3-205ENST00000521589 UGGT1Q9NYU2 1555 aa13.62□□□□□ -0.23
NPIPB3-205ENST00000521589 CEP152O94986 1710 aa13.62□□□□□ -0.23
NPIPB3-205ENST00000521589 VWDEQ8N2E2 1590 aa13.62□□□□□ -0.23
NPIPB3-205ENST00000521589 LMTK2Q8IWU2 1503 aa13.61□□□□□ -0.23
NPIPB3-205ENST00000521589 THEMISQ8N1K5 641 aaPredicted RBP13.61□□□□□ -0.23
NPIPB3-205ENST00000521589 POLR1AO95602 1720 aaPredicted RBP13.6□□□□□ -0.23
NPIPB3-205ENST00000521589 MED14O60244 1454 aa13.6□□□□□ -0.23
NPIPB3-205ENST00000521589 ZNF335Q9H4Z2 1342 aaPredicted RBP13.6□□□□□ -0.23
NPIPB3-205ENST00000521589 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.59□□□□□ -0.23
NPIPB3-205ENST00000521589 CHIC2Q9UKJ5 165 aa13.59□□□□□ -0.23
NPIPB3-205ENST00000521589 KANK1Q14678 1352 aa13.58□□□□□ -0.23
NPIPB3-205ENST00000521589 FAM50AQ14320 339 aaKnown RBP13.58□□□□□ -0.24
NPIPB3-205ENST00000521589 ANKLE2Q86XL3 938 aa13.58□□□□□ -0.24
NPIPB3-205ENST00000521589 ANKRD50Q9ULJ7 1429 aa13.56□□□□□ -0.24
NPIPB3-205ENST00000521589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.55□□□□□ -0.24
NPIPB3-205ENST00000521589 UBR1Q8IWV7 1749 aa13.55□□□□□ -0.24
NPIPB3-205ENST00000521589 ROCK1Q13464 1354 aa13.55□□□□□ -0.24
NPIPB3-205ENST00000521589 NPHP4O75161 1426 aaPredicted RBP13.55□□□□□ -0.24
NPIPB3-205ENST00000521589 EFCAB6Q5THR3 1501 aa13.54□□□□□ -0.24
NPIPB3-205ENST00000521589 ARHGAP23Q9P227 1491 aa13.54□□□□□ -0.24
NPIPB3-205ENST00000521589 SLIT1O75093 1534 aa13.54□□□□□ -0.24
NPIPB3-205ENST00000521589 NOS1P29475 1434 aa13.53□□□□□ -0.24
NPIPB3-205ENST00000521589 CPS1P31327 1500 aa13.53□□□□□ -0.24
NPIPB3-205ENST00000521589 CFAP65Q6ZU64 1925 aaKnown RBP13.52□□□□□ -0.24
NPIPB3-205ENST00000521589 RPRD2Q5VT52 1461 aaKnown RBP13.52□□□□□ -0.25
NPIPB3-205ENST00000521589 SCAF11Q99590 1463 aaKnown RBP13.52□□□□□ -0.25
NPIPB3-205ENST00000521589 IQGAP1P46940 1657 aa13.52□□□□□ -0.25
NPIPB3-205ENST00000521589 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
NPIPB3-205ENST00000521589 SYNMO15061 1565 aa13.5□□□□□ -0.25
NPIPB3-205ENST00000521589 PIK3C2BO00750 1634 aa13.5□□□□□ -0.25
NPIPB3-205ENST00000521589 UNC13BO14795 1591 aa13.49□□□□□ -0.25
NPIPB3-205ENST00000521589 TMEM2Q9UHN6 1383 aa13.48□□□□□ -0.25
NPIPB3-205ENST00000521589 TET3O43151 1660 aa13.48□□□□□ -0.25
NPIPB3-205ENST00000521589 IDI1Q13907 227 aa13.48□□□□□ -0.25
NPIPB3-205ENST00000521589 LTKP29376 864 aa13.47□□□□□ -0.25
NPIPB3-205ENST00000521589 SLC52A1Q9NWF4 448 aa13.47□□□□□ -0.25
NPIPB3-205ENST00000521589 RRBP1Q9P2E9 1410 aaKnown RBP13.46□□□□□ -0.26
NPIPB3-205ENST00000521589 ADGRB3O60242 1522 aa13.45□□□□□ -0.26
NPIPB3-205ENST00000521589 UBAP1LF5GYI3 381 aa13.45□□□□□ -0.26
NPIPB3-205ENST00000521589 TXNDC2Q86VQ3 553 aa13.45□□□□□ -0.26
NPIPB3-205ENST00000521589 EID1Q9Y6B2 187 aa13.45□□□□□ -0.26
NPIPB3-205ENST00000521589 GCC2Q8IWJ2 1684 aa13.44□□□□□ -0.26
NPIPB3-205ENST00000521589 IQGAP3Q86VI3 1631 aa13.44□□□□□ -0.26
NPIPB3-205ENST00000521589 PPARGC1BQ86YN6 1023 aaKnown RBP13.43□□□□□ -0.26
NPIPB3-205ENST00000521589 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
NPIPB3-205ENST00000521589 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
NPIPB3-205ENST00000521589 LRRC7Q96NW7 1537 aa13.42□□□□□ -0.26
NPIPB3-205ENST00000521589 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
NPIPB3-205ENST00000521589 TOM1O60784 492 aa13.4□□□□□ -0.26
NPIPB3-205ENST00000521589 NUP155O75694 1391 aa13.4□□□□□ -0.26
NPIPB3-205ENST00000521589 E9PCH4 1651 aa13.4□□□□□ -0.26
NPIPB3-205ENST00000521589 ALKQ9UM73 1620 aa13.39□□□□□ -0.27
NPIPB3-205ENST00000521589 ITGAEP38570 1179 aa13.39□□□□□ -0.27
NPIPB3-205ENST00000521589 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
NPIPB3-205ENST00000521589 NAIPQ13075 1403 aa13.36□□□□□ -0.27
NPIPB3-205ENST00000521589 PLEKHG1Q9ULL1 1385 aa13.35□□□□□ -0.27
NPIPB3-205ENST00000521589 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
NPIPB3-205ENST00000521589 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
NPIPB3-205ENST00000521589 KCNA6P17658 529 aa13.34□□□□□ -0.27
NPIPB3-205ENST00000521589 MYO5BQ9ULV0 1848 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms