RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 WASHC2CQ9Y4E1 1318 aa33.5■■■□□ 2.95
HOXA3-204ENST00000521401 DNMT1P26358 1616 aaKnown RBP33.47■■■□□ 2.95
HOXA3-204ENST00000521401 KIF15Q9NS87 1388 aa33.47■■■□□ 2.95
HOXA3-204ENST00000521401 DUOX2Q9NRD8 1548 aa33.46■■■□□ 2.95
HOXA3-204ENST00000521401 STRCQ7RTU9 1775 aa33.46■■■□□ 2.95
HOXA3-204ENST00000521401 FBXO31Q5XUX0 539 aaPredicted RBP33.45■■■□□ 2.95
HOXA3-204ENST00000521401 RRP7BPQ9NSQ0 103 aa33.45■■■□□ 2.95
HOXA3-204ENST00000521401 RNF17Q9BXT8 1623 aaKnown RBP33.44■■■□□ 2.94
HOXA3-204ENST00000521401 CROCC2H7BZ55 1655 aa33.44■■■□□ 2.94
HOXA3-204ENST00000521401 PZPP20742 1482 aa33.43■■■□□ 2.94
HOXA3-204ENST00000521401 EIF2AK4Q9P2K8 1649 aaKnown RBP33.42■■■□□ 2.94
HOXA3-204ENST00000521401 NCOA1Q15788 1441 aa33.42■■■□□ 2.94
HOXA3-204ENST00000521401 DMRT2Q9Y5R5 561 aa33.41■■■□□ 2.94
HOXA3-204ENST00000521401 MROH1Q8NDA8 1641 aa33.39■■■□□ 2.94
HOXA3-204ENST00000521401 MYO3AQ8NEV4 1616 aa33.39■■■□□ 2.94
HOXA3-204ENST00000521401 CHIC2Q9UKJ5 165 aa33.39■■■□□ 2.94
HOXA3-204ENST00000521401 ABCC3O15438 1527 aa33.38■■■□□ 2.93
HOXA3-204ENST00000521401 ERBINQ96RT1 1412 aa33.37■■■□□ 2.93
HOXA3-204ENST00000521401 FAM50AQ14320 339 aaKnown RBP33.37■■■□□ 2.93
HOXA3-204ENST00000521401 TNRQ92752 1358 aa33.36■■■□□ 2.93
HOXA3-204ENST00000521401 CEP170BQ9Y4F5 1589 aaPredicted RBP33.36■■■□□ 2.93
HOXA3-204ENST00000521401 PTPRTO14522 1441 aa33.36■■■□□ 2.93
HOXA3-204ENST00000521401 CAMSAP1Q5T5Y3 1602 aa33.35■■■□□ 2.93
HOXA3-204ENST00000521401 ANKRD30AQ9BXX3 1397 aa33.34■■■□□ 2.93
HOXA3-204ENST00000521401 ZNF142P52746 1687 aaPredicted RBP33.34■■■□□ 2.93
HOXA3-204ENST00000521401 A2ML1A8K2U0 1454 aa33.31■■■□□ 2.92
HOXA3-204ENST00000521401 FBXO41Q8TF61 875 aa33.3■■■□□ 2.92
HOXA3-204ENST00000521401 ADGRL2O95490 1459 aa33.3■■■□□ 2.92
HOXA3-204ENST00000521401 NCKAP5LQ9HCH0 1330 aa33.28■■■□□ 2.92
HOXA3-204ENST00000521401 PPARGC1BQ86YN6 1023 aaKnown RBP33.28■■■□□ 2.92
HOXA3-204ENST00000521401 PLA2R1Q13018 1463 aa33.28■■■□□ 2.92
HOXA3-204ENST00000521401 ZC3H13Q5T200 1668 aaKnown RBP33.27■■■□□ 2.92
HOXA3-204ENST00000521401 PRDM15P57071 1507 aaPredicted RBP33.26■■■□□ 2.91
HOXA3-204ENST00000521401 CERKQ8TCT0 537 aa33.25■■■□□ 2.91
HOXA3-204ENST00000521401 PKD2Q13563 968 aa33.23■■■□□ 2.91
HOXA3-204ENST00000521401 SPATA31D1Q6ZQQ2 1576 aa33.21■■■□□ 2.91
HOXA3-204ENST00000521401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.21■■■□□ 2.91
HOXA3-204ENST00000521401 ERVK-7P63135 1459 aa33.2■■■□□ 2.91
HOXA3-204ENST00000521401 NLRP1Q9C000 1473 aa33.2■■■□□ 2.91
HOXA3-204ENST00000521401 DEPDC5O75140 1603 aa33.2■■■□□ 2.9
HOXA3-204ENST00000521401 CEP152O94986 1710 aa33.18■■■□□ 2.9
HOXA3-204ENST00000521401 ARHGAP31Q2M1Z3 1444 aa33.18■■■□□ 2.9
HOXA3-204ENST00000521401 ANKRD50Q9ULJ7 1429 aa33.13■■■□□ 2.89
HOXA3-204ENST00000521401 KANK1Q14678 1352 aa33.13■■■□□ 2.89
HOXA3-204ENST00000521401 VWDEQ8N2E2 1590 aa33.13■■■□□ 2.89
HOXA3-204ENST00000521401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.11■■■□□ 2.89
HOXA3-204ENST00000521401 THEMISQ8N1K5 641 aaPredicted RBP33.11■■■□□ 2.89
HOXA3-204ENST00000521401 LMTK2Q8IWU2 1503 aa33.11■■■□□ 2.89
HOXA3-204ENST00000521401 LTBP4Q8N2S1 1624 aa33.1■■■□□ 2.89
HOXA3-204ENST00000521401 UGGT1Q9NYU2 1555 aa33.09■■■□□ 2.89
HOXA3-204ENST00000521401 ROCK1Q13464 1354 aa33.08■■■□□ 2.89
HOXA3-204ENST00000521401 ANKLE2Q86XL3 938 aa33.03■■■□□ 2.88
HOXA3-204ENST00000521401 ZNF335Q9H4Z2 1342 aaPredicted RBP33.02■■■□□ 2.88
HOXA3-204ENST00000521401 NEURL4Q96JN8 1562 aa33.02■■■□□ 2.88
HOXA3-204ENST00000521401 ITGAEP38570 1179 aa33.01■■■□□ 2.87
HOXA3-204ENST00000521401 RRBP1Q9P2E9 1410 aaKnown RBP32.98■■■□□ 2.87
HOXA3-204ENST00000521401 CFAP65Q6ZU64 1925 aaKnown RBP32.96■■■□□ 2.87
HOXA3-204ENST00000521401 EFCAB6Q5THR3 1501 aa32.96■■■□□ 2.87
HOXA3-204ENST00000521401 NOS1P29475 1434 aa32.94■■■□□ 2.86
HOXA3-204ENST00000521401 MED14O60244 1454 aa32.94■■■□□ 2.86
HOXA3-204ENST00000521401 POLR1AO95602 1720 aaPredicted RBP32.93■■■□□ 2.86
HOXA3-204ENST00000521401 NPHP4O75161 1426 aaPredicted RBP32.92■■■□□ 2.86
HOXA3-204ENST00000521401 IDI1Q13907 227 aa32.91■■■□□ 2.86
HOXA3-204ENST00000521401 UBR1Q8IWV7 1749 aa32.91■■■□□ 2.86
HOXA3-204ENST00000521401 UNC13BO14795 1591 aa32.89■■■□□ 2.86
HOXA3-204ENST00000521401 IQSEC2Q5JU85 1478 aa32.88■■■□□ 2.85
HOXA3-204ENST00000521401 SYNMO15061 1565 aa32.87■■■□□ 2.85
HOXA3-204ENST00000521401 ARHGAP23Q9P227 1491 aa32.87■■■□□ 2.85
HOXA3-204ENST00000521401 RPRD2Q5VT52 1461 aaKnown RBP32.86■■■□□ 2.85
HOXA3-204ENST00000521401 LTKP29376 864 aa32.85■■■□□ 2.85
HOXA3-204ENST00000521401 SLIT1O75093 1534 aa32.85■■■□□ 2.85
HOXA3-204ENST00000521401 PIK3C2BO00750 1634 aa32.84■■■□□ 2.85
HOXA3-204ENST00000521401 TET3O43151 1660 aa32.82■■■□□ 2.84
HOXA3-204ENST00000521401 SCAF11Q99590 1463 aaKnown RBP32.81■■■□□ 2.84
HOXA3-204ENST00000521401 TXNDC2Q86VQ3 553 aa32.81■■■□□ 2.84
HOXA3-204ENST00000521401 SLC52A1Q9NWF4 448 aa32.81■■■□□ 2.84
HOXA3-204ENST00000521401 TMEM2Q9UHN6 1383 aa32.81■■■□□ 2.84
HOXA3-204ENST00000521401 STAG3Q9UJ98 1225 aa32.79■■■□□ 2.84
HOXA3-204ENST00000521401 NUP155O75694 1391 aa32.79■■■□□ 2.84
HOXA3-204ENST00000521401 IQGAP1P46940 1657 aa32.77■■■□□ 2.84
HOXA3-204ENST00000521401 IQGAP3Q86VI3 1631 aa32.75■■■□□ 2.83
HOXA3-204ENST00000521401 KDM5AP29375 1690 aaKnown RBP32.73■■■□□ 2.83
HOXA3-204ENST00000521401 EID1Q9Y6B2 187 aa32.73■■■□□ 2.83
HOXA3-204ENST00000521401 CPS1P31327 1500 aa32.72■■■□□ 2.83
HOXA3-204ENST00000521401 GCC2Q8IWJ2 1684 aa32.72■■■□□ 2.83
HOXA3-204ENST00000521401 ADGRB3O60242 1522 aa32.72■■■□□ 2.83
HOXA3-204ENST00000521401 NAIPQ13075 1403 aa32.71■■■□□ 2.83
HOXA3-204ENST00000521401 E9PCH4 1651 aa32.69■■■□□ 2.82
HOXA3-204ENST00000521401 UBAP1LF5GYI3 381 aa32.65■■■□□ 2.82
HOXA3-204ENST00000521401 HFM1A2PYH4 1435 aa32.6■■■□□ 2.81
HOXA3-204ENST00000521401 ZFYVE9O95405 1425 aa32.59■■■□□ 2.81
HOXA3-204ENST00000521401 STRCP1A6NGW2 1772 aa32.58■■■□□ 2.81
HOXA3-204ENST00000521401 TMEM131LA2VDJ0 1609 aa32.58■■■□□ 2.81
HOXA3-204ENST00000521401 LRRC7Q96NW7 1537 aa32.56■■■□□ 2.8
HOXA3-204ENST00000521401 RIMS2Q9UQ26 1411 aa32.54■■■□□ 2.8
HOXA3-204ENST00000521401 CHGAP10645 457 aaKnown RBP32.53■■■□□ 2.8
HOXA3-204ENST00000521401 SLC26A8Q96RN1 970 aa32.53■■■□□ 2.8
HOXA3-204ENST00000521401 PLEKHG1Q9ULL1 1385 aa32.48■■■□□ 2.79
HOXA3-204ENST00000521401 TOM1O60784 492 aa32.48■■■□□ 2.79
HOXA3-204ENST00000521401 HDGFP51858 240 aaKnown RBP32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms