RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 A2ML1A8K2U0 1454 aa32.29■■■□□ 2.76
SNHG6-205ENST00000521399 FAM135AQ9P2D6 1515 aa32.29■■■□□ 2.76
SNHG6-205ENST00000521399 TSPY4P0CV99 314 aa32.28■■■□□ 2.76
SNHG6-205ENST00000521399 TSPY10P0CW01 314 aa32.28■■■□□ 2.76
SNHG6-205ENST00000521399 KDM5DQ9BY66 1539 aa32.27■■■□□ 2.76
SNHG6-205ENST00000521399 ZNF335Q9H4Z2 1342 aaPredicted RBP32.26■■■□□ 2.76
SNHG6-205ENST00000521399 DNMT1P26358 1616 aaKnown RBP32.26■■■□□ 2.76
SNHG6-205ENST00000521399 FBXO31Q5XUX0 539 aaPredicted RBP32.25■■■□□ 2.75
SNHG6-205ENST00000521399 WASHC2CQ9Y4E1 1318 aa32.25■■■□□ 2.75
SNHG6-205ENST00000521399 PZPP20742 1482 aa32.24■■■□□ 2.75
SNHG6-205ENST00000521399 TNRQ92752 1358 aa32.23■■■□□ 2.75
SNHG6-205ENST00000521399 KANK4Q5T7N3 995 aaPredicted RBP32.19■■■□□ 2.74
SNHG6-205ENST00000521399 MAP3K1Q13233 1512 aa32.19■■■□□ 2.74
SNHG6-205ENST00000521399 MAST1Q9Y2H9 1570 aa32.16■■■□□ 2.74
SNHG6-205ENST00000521399 DISP3Q9P2K9 1392 aa32.14■■■□□ 2.74
SNHG6-205ENST00000521399 MIA2Q96PC5 1412 aa32.13■■■□□ 2.73
SNHG6-205ENST00000521399 POLR1AO95602 1720 aaPredicted RBP32.12■■■□□ 2.73
SNHG6-205ENST00000521399 RNF17Q9BXT8 1623 aaKnown RBP32.11■■■□□ 2.73
SNHG6-205ENST00000521399 MYOM3Q5VTT5 1437 aa32.11■■■□□ 2.73
SNHG6-205ENST00000521399 NLRP1Q9C000 1473 aa32.1■■■□□ 2.73
SNHG6-205ENST00000521399 NEURL4Q96JN8 1562 aa32.09■■■□□ 2.73
SNHG6-205ENST00000521399 UBAP1LF5GYI3 381 aa32.08■■■□□ 2.73
SNHG6-205ENST00000521399 THEMISQ8N1K5 641 aaPredicted RBP32.06■■■□□ 2.72
SNHG6-205ENST00000521399 EIF2AK4Q9P2K8 1649 aaKnown RBP32.06■■■□□ 2.72
SNHG6-205ENST00000521399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.06■■■□□ 2.72
SNHG6-205ENST00000521399 ABCC3O15438 1527 aa32.05■■■□□ 2.72
SNHG6-205ENST00000521399 ANKLE2Q86XL3 938 aa32.05■■■□□ 2.72
SNHG6-205ENST00000521399 UGGT1Q9NYU2 1555 aa32.04■■■□□ 2.72
SNHG6-205ENST00000521399 ZC3H13Q5T200 1668 aaKnown RBP32.04■■■□□ 2.72
SNHG6-205ENST00000521399 ILDR2Q71H61 639 aa32.01■■■□□ 2.71
SNHG6-205ENST00000521399 SPATA31D1Q6ZQQ2 1576 aa32■■■□□ 2.71
SNHG6-205ENST00000521399 MROH1Q8NDA8 1641 aa31.99■■■□□ 2.71
SNHG6-205ENST00000521399 SHANK2Q9UPX8 1470 aa31.97■■■□□ 2.71
SNHG6-205ENST00000521399 CPS1P31327 1500 aa31.97■■■□□ 2.71
SNHG6-205ENST00000521399 DUOX2Q9NRD8 1548 aa31.97■■■□□ 2.71
SNHG6-205ENST00000521399 DEPDC5O75140 1603 aa31.96■■■□□ 2.71
SNHG6-205ENST00000521399 MED14O60244 1454 aa31.96■■■□□ 2.71
SNHG6-205ENST00000521399 ERVK-7P63135 1459 aa31.95■■■□□ 2.7
SNHG6-205ENST00000521399 NPHP4O75161 1426 aaPredicted RBP31.93■■■□□ 2.7
SNHG6-205ENST00000521399 CEP152O94986 1710 aa31.93■■■□□ 2.7
SNHG6-205ENST00000521399 APLP2Q06481 763 aa31.92■■■□□ 2.7
SNHG6-205ENST00000521399 CFAP65Q6ZU64 1925 aaKnown RBP31.92■■■□□ 2.7
SNHG6-205ENST00000521399 VWDEQ8N2E2 1590 aa31.91■■■□□ 2.7
SNHG6-205ENST00000521399 ABCC5O15440 1437 aa31.91■■■□□ 2.7
SNHG6-205ENST00000521399 KIF15Q9NS87 1388 aa31.9■■■□□ 2.7
SNHG6-205ENST00000521399 PTPN23Q9H3S7 1636 aa31.89■■■□□ 2.7
SNHG6-205ENST00000521399 CROCC2H7BZ55 1655 aa31.89■■■□□ 2.7
SNHG6-205ENST00000521399 IQGAP1P46940 1657 aa31.86■■■□□ 2.69
SNHG6-205ENST00000521399 ERBINQ96RT1 1412 aa31.86■■■□□ 2.69
SNHG6-205ENST00000521399 RRP7BPQ9NSQ0 103 aa31.86■■■□□ 2.69
SNHG6-205ENST00000521399 TOM1O60784 492 aa31.85■■■□□ 2.69
SNHG6-205ENST00000521399 PRDM15P57071 1507 aaPredicted RBP31.85■■■□□ 2.69
SNHG6-205ENST00000521399 SOCS7O14512 581 aa31.83■■■□□ 2.69
SNHG6-205ENST00000521399 DAPK1P53355 1430 aa31.83■■■□□ 2.69
SNHG6-205ENST00000521399 ARHGAP31Q2M1Z3 1444 aa31.83■■■□□ 2.69
SNHG6-205ENST00000521399 UBR1Q8IWV7 1749 aa31.81■■■□□ 2.68
SNHG6-205ENST00000521399 FGD6Q6ZV73 1430 aa31.81■■■□□ 2.68
SNHG6-205ENST00000521399 SCAF1Q9H7N4 1312 aaKnown RBP31.8■■■□□ 2.68
SNHG6-205ENST00000521399 PIP4K2BP78356 416 aa31.8■■■□□ 2.68
SNHG6-205ENST00000521399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.76■■■□□ 2.678e-25■□□□□ 9.7
SNHG6-205ENST00000521399 HSPA1LP34931 641 aa31.75■■■□□ 2.67
SNHG6-205ENST00000521399 STRCP1A6NGW2 1772 aa31.74■■■□□ 2.67
SNHG6-205ENST00000521399 SCAF11Q99590 1463 aaKnown RBP31.73■■■□□ 2.67
SNHG6-205ENST00000521399 KANK1Q14678 1352 aa31.72■■■□□ 2.67
SNHG6-205ENST00000521399 ANKRD30AQ9BXX3 1397 aa31.72■■■□□ 2.67
SNHG6-205ENST00000521399 ARHGAP23Q9P227 1491 aa31.72■■■□□ 2.67
SNHG6-205ENST00000521399 SLIT1O75093 1534 aa31.71■■■□□ 2.67
SNHG6-205ENST00000521399 CHIC2Q9UKJ5 165 aa31.71■■■□□ 2.67
SNHG6-205ENST00000521399 LTKP29376 864 aa31.7■■■□□ 2.67
SNHG6-205ENST00000521399 LRRC7Q96NW7 1537 aa31.7■■■□□ 2.66
SNHG6-205ENST00000521399 ALKQ9UM73 1620 aa31.69■■■□□ 2.66
SNHG6-205ENST00000521399 TXNDC2Q86VQ3 553 aa31.68■■■□□ 2.66
SNHG6-205ENST00000521399 SYNMO15061 1565 aa31.66■■■□□ 2.66
SNHG6-205ENST00000521399 LMTK2Q8IWU2 1503 aa31.65■■■□□ 2.66
SNHG6-205ENST00000521399 PIK3C2BO00750 1634 aa31.65■■■□□ 2.66
SNHG6-205ENST00000521399 EID1Q9Y6B2 187 aa31.64■■■□□ 2.66
SNHG6-205ENST00000521399 TMEM2Q9UHN6 1383 aa31.6■■■□□ 2.65
SNHG6-205ENST00000521399 STAG3Q9UJ98 1225 aa31.6■■■□□ 2.65
SNHG6-205ENST00000521399 ADGRL2O95490 1459 aa31.59■■■□□ 2.65
SNHG6-205ENST00000521399 KDM5AP29375 1690 aaKnown RBP31.58■■■□□ 2.65
SNHG6-205ENST00000521399 IDI1Q13907 227 aa31.58■■■□□ 2.65
SNHG6-205ENST00000521399 MED1Q15648 1581 aaPredicted RBP31.57■■■□□ 2.64
SNHG6-205ENST00000521399 EFCAB6Q5THR3 1501 aa31.55■■■□□ 2.64
SNHG6-205ENST00000521399 FAM50AQ14320 339 aaKnown RBP31.54■■■□□ 2.64
SNHG6-205ENST00000521399 NOS1P29475 1434 aa31.53■■■□□ 2.64
SNHG6-205ENST00000521399 XIRP1Q702N8 1843 aaKnown RBP31.49■■■□□ 2.63
SNHG6-205ENST00000521399 ANKRD50Q9ULJ7 1429 aa31.49■■■□□ 2.63
SNHG6-205ENST00000521399 SLC52A1Q9NWF4 448 aa31.47■■■□□ 2.63
SNHG6-205ENST00000521399 ADGRB3O60242 1522 aa31.45■■■□□ 2.63
SNHG6-205ENST00000521399 SENP3Q9H4L4 574 aaPredicted RBP31.44■■■□□ 2.62
SNHG6-205ENST00000521399 RPRD2Q5VT52 1461 aaKnown RBP31.44■■■□□ 2.62
SNHG6-205ENST00000521399 TET3O43151 1660 aa31.44■■■□□ 2.62
SNHG6-205ENST00000521399 KCNA6P17658 529 aa31.4■■■□□ 2.62
SNHG6-205ENST00000521399 SLC26A8Q96RN1 970 aa31.4■■■□□ 2.62
SNHG6-205ENST00000521399 TMEM94Q12767 1356 aa31.37■■■□□ 2.61
SNHG6-205ENST00000521399 PHF23Q9BUL5 403 aaPredicted RBP31.36■■■□□ 2.61
SNHG6-205ENST00000521399 UNC13BO14795 1591 aa31.32■■■□□ 2.6
SNHG6-205ENST00000521399 FAM135BQ49AJ0 1406 aa31.32■■■□□ 2.6
SNHG6-205ENST00000521399 GCC2Q8IWJ2 1684 aa31.32■■■□□ 2.6
SNHG6-205ENST00000521399 MYO5BQ9ULV0 1848 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms