RNA–Protein interactions for RNA: ENST00000520994.1

MCM4-211, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 3

Gene MCM4, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-211ENST00000520994 CLTCQ00610 1675 aaKnown RBP31.86■■■□□ 2.69
MCM4-211ENST00000520994 ZMYM3Q14202 1370 aa31.86■■■□□ 2.69
MCM4-211ENST00000520994 LMTK3Q96Q04 1460 aa31.84■■■□□ 2.69
MCM4-211ENST00000520994 NPATQ14207 1427 aa31.83■■■□□ 2.69
MCM4-211ENST00000520994 PREX1Q8TCU6 1659 aa31.83■■■□□ 2.69
MCM4-211ENST00000520994 KDM5DQ9BY66 1539 aa31.82■■■□□ 2.68
MCM4-211ENST00000520994 CEBPAP49715 358 aaPredicted RBP31.82■■■□□ 2.68
MCM4-211ENST00000520994 RRBP1Q9P2E9 1410 aaKnown RBP31.82■■■□□ 2.68
MCM4-211ENST00000520994 ZC3H13Q5T200 1668 aaKnown RBP31.79■■■□□ 2.68
MCM4-211ENST00000520994 PPARGC1BQ86YN6 1023 aaKnown RBP31.78■■■□□ 2.68
MCM4-211ENST00000520994 RRP7BPQ9NSQ0 103 aa31.78■■■□□ 2.68
MCM4-211ENST00000520994 MROH1Q8NDA8 1641 aa31.76■■■□□ 2.67
MCM4-211ENST00000520994 ROCK1Q13464 1354 aa31.76■■■□□ 2.67
MCM4-211ENST00000520994 CHIC2Q9UKJ5 165 aa31.75■■■□□ 2.67
MCM4-211ENST00000520994 DEPDC5O75140 1603 aa31.75■■■□□ 2.67
MCM4-211ENST00000520994 WASHC2CQ9Y4E1 1318 aa31.74■■■□□ 2.67
MCM4-211ENST00000520994 PLPPR3Q6T4P5 718 aa31.73■■■□□ 2.67
MCM4-211ENST00000520994 PRDM15P57071 1507 aaPredicted RBP31.73■■■□□ 2.67
MCM4-211ENST00000520994 PTPRKQ15262 1439 aa31.73■■■□□ 2.67
MCM4-211ENST00000520994 UHRF1BP1Q6BDS2 1440 aa31.72■■■□□ 2.67
MCM4-211ENST00000520994 PZPP20742 1482 aa31.69■■■□□ 2.66
MCM4-211ENST00000520994 ABCC3O15438 1527 aa31.69■■■□□ 2.66
MCM4-211ENST00000520994 ANKRD50Q9ULJ7 1429 aa31.66■■■□□ 2.66
MCM4-211ENST00000520994 VWDEQ8N2E2 1590 aa31.62■■■□□ 2.65
MCM4-211ENST00000520994 LMTK2Q8IWU2 1503 aa31.6■■■□□ 2.65
MCM4-211ENST00000520994 ARHGAP31Q2M1Z3 1444 aa31.6■■■□□ 2.65
MCM4-211ENST00000520994 KANK1Q14678 1352 aa31.6■■■□□ 2.65
MCM4-211ENST00000520994 CEP152O94986 1710 aa31.59■■■□□ 2.65
MCM4-211ENST00000520994 ZNF142P52746 1687 aaPredicted RBP31.59■■■□□ 2.65
MCM4-211ENST00000520994 CAMSAP1Q5T5Y3 1602 aa31.58■■■□□ 2.65
MCM4-211ENST00000520994 MYO3AQ8NEV4 1616 aa31.57■■■□□ 2.64
MCM4-211ENST00000520994 SPATA31D1Q6ZQQ2 1576 aa31.54■■■□□ 2.64
MCM4-211ENST00000520994 HSPA2P54652 639 aa31.53■■■□□ 2.64
MCM4-211ENST00000520994 TNRQ92752 1358 aa31.52■■■□□ 2.64
MCM4-211ENST00000520994 UNC13BO14795 1591 aa31.51■■■□□ 2.63
MCM4-211ENST00000520994 CEP170BQ9Y4F5 1589 aaPredicted RBP31.51■■■□□ 2.63
MCM4-211ENST00000520994 A2ML1A8K2U0 1454 aa31.49■■■□□ 2.63
MCM4-211ENST00000520994 NLRP1Q9C000 1473 aa31.49■■■□□ 2.63
MCM4-211ENST00000520994 FBXO31Q5XUX0 539 aaPredicted RBP31.49■■■□□ 2.63
MCM4-211ENST00000520994 ITGAEP38570 1179 aa31.48■■■□□ 2.63
MCM4-211ENST00000520994 ERVK-7P63135 1459 aa31.47■■■□□ 2.63
MCM4-211ENST00000520994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.46■■■□□ 2.638e-18■■■□□ 17.5
MCM4-211ENST00000520994 STRCQ7RTU9 1775 aa31.45■■■□□ 2.62
MCM4-211ENST00000520994 PLA2R1Q13018 1463 aa31.44■■■□□ 2.62
MCM4-211ENST00000520994 EFCAB6Q5THR3 1501 aa31.43■■■□□ 2.62
MCM4-211ENST00000520994 RPRD2Q5VT52 1461 aaKnown RBP31.41■■■□□ 2.62
MCM4-211ENST00000520994 DMRT2Q9Y5R5 561 aa31.41■■■□□ 2.62
MCM4-211ENST00000520994 GCC2Q8IWJ2 1684 aa31.41■■■□□ 2.62
MCM4-211ENST00000520994 TET3O43151 1660 aa31.4■■■□□ 2.62
MCM4-211ENST00000520994 CFAP65Q6ZU64 1925 aaKnown RBP31.39■■■□□ 2.62
MCM4-211ENST00000520994 NAIPQ13075 1403 aa31.39■■■□□ 2.62
MCM4-211ENST00000520994 IQGAP3Q86VI3 1631 aa31.38■■■□□ 2.61
MCM4-211ENST00000520994 HFM1A2PYH4 1435 aa31.37■■■□□ 2.61
MCM4-211ENST00000520994 PTPRTO14522 1441 aa31.34■■■□□ 2.61
MCM4-211ENST00000520994 NOS1P29475 1434 aa31.33■■■□□ 2.61
MCM4-211ENST00000520994 UGGT1Q9NYU2 1555 aa31.32■■■□□ 2.6
MCM4-211ENST00000520994 PKD2Q13563 968 aa31.32■■■□□ 2.6
MCM4-211ENST00000520994 THEMISQ8N1K5 641 aaPredicted RBP31.31■■■□□ 2.6
MCM4-211ENST00000520994 KDM5AP29375 1690 aaKnown RBP31.29■■■□□ 2.6
MCM4-211ENST00000520994 NUP155O75694 1391 aa31.29■■■□□ 2.6
MCM4-211ENST00000520994 UBR1Q8IWV7 1749 aa31.24■■■□□ 2.59
MCM4-211ENST00000520994 SLC52A1Q9NWF4 448 aa31.24■■■□□ 2.59
MCM4-211ENST00000520994 SYNMO15061 1565 aa31.24■■■□□ 2.59
MCM4-211ENST00000520994 E9PCH4 1651 aa31.23■■■□□ 2.59
MCM4-211ENST00000520994 POLR1AO95602 1720 aaPredicted RBP31.21■■■□□ 2.59
MCM4-211ENST00000520994 ACIN1Q9UKV3 1341 aaKnown RBP31.21■■■□□ 2.59
MCM4-211ENST00000520994 PIK3C2BO00750 1634 aa31.18■■■□□ 2.58
MCM4-211ENST00000520994 MED14O60244 1454 aa31.16■■■□□ 2.58
MCM4-211ENST00000520994 SLIT1O75093 1534 aa31.16■■■□□ 2.58
MCM4-211ENST00000520994 ANKLE2Q86XL3 938 aa31.16■■■□□ 2.58
MCM4-211ENST00000520994 NCKAP5LQ9HCH0 1330 aa31.16■■■□□ 2.58
MCM4-211ENST00000520994 ARHGAP23Q9P227 1491 aa31.15■■■□□ 2.58
MCM4-211ENST00000520994 IDI1Q13907 227 aa31.15■■■□□ 2.58
MCM4-211ENST00000520994 NEURL4Q96JN8 1562 aa31.13■■■□□ 2.57
MCM4-211ENST00000520994 ADGRB3O60242 1522 aa31.1■■■□□ 2.57
MCM4-211ENST00000520994 SPHKAPQ2M3C7 1700 aa31.06■■■□□ 2.56
MCM4-211ENST00000520994 TMEM2Q9UHN6 1383 aa31.05■■■□□ 2.56
MCM4-211ENST00000520994 STAG3Q9UJ98 1225 aa31.04■■■□□ 2.56
MCM4-211ENST00000520994 SETD5Q9C0A6 1442 aa31.04■■■□□ 2.56
MCM4-211ENST00000520994 SCAF11Q99590 1463 aaKnown RBP31.03■■■□□ 2.56
MCM4-211ENST00000520994 NPHP4O75161 1426 aaPredicted RBP31.02■■■□□ 2.56
MCM4-211ENST00000520994 TMEM131LA2VDJ0 1609 aa31.02■■■□□ 2.56
MCM4-211ENST00000520994 TRIM52Q96A61 297 aa31.01■■■□□ 2.55
MCM4-211ENST00000520994 IQGAP1P46940 1657 aa31■■■□□ 2.55
MCM4-211ENST00000520994 LTBP4Q8N2S1 1624 aa30.99■■■□□ 2.55
MCM4-211ENST00000520994 EID1Q9Y6B2 187 aa30.99■■■□□ 2.55
MCM4-211ENST00000520994 TRPM2O94759 1503 aa30.97■■■□□ 2.55
MCM4-211ENST00000520994 LTKP29376 864 aa30.96■■■□□ 2.55
MCM4-211ENST00000520994 TXNDC2Q86VQ3 553 aa30.96■■■□□ 2.55
MCM4-211ENST00000520994 CERKQ8TCT0 537 aa30.95■■■□□ 2.55
MCM4-211ENST00000520994 SLC4A1APQ9BWU0 796 aaKnown RBP30.95■■■□□ 2.55
MCM4-211ENST00000520994 MYO5BQ9ULV0 1848 aa30.95■■■□□ 2.55
MCM4-211ENST00000520994 HRCP23327 699 aa30.94■■■□□ 2.54
MCM4-211ENST00000520994 IQSEC2Q5JU85 1478 aa30.94■■■□□ 2.54
MCM4-211ENST00000520994 HDGFP51858 240 aaKnown RBP30.93■■■□□ 2.54
MCM4-211ENST00000520994 ZFYVE9O95405 1425 aa30.91■■■□□ 2.54
MCM4-211ENST00000520994 RAB3GAP2Q9H2M9 1393 aa30.88■■■□□ 2.53
MCM4-211ENST00000520994 ZNF335Q9H4Z2 1342 aaPredicted RBP30.87■■■□□ 2.53
MCM4-211ENST00000520994 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.86■■■□□ 2.53
MCM4-211ENST00000520994 MPHOSPH9Q99550 1183 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms