RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 FBXO31Q5XUX0 539 aaPredicted RBP31.95■■■□□ 2.71
SNHG6-203ENST00000520944 FAM135AQ9P2D6 1515 aa31.95■■■□□ 2.7
SNHG6-203ENST00000520944 CAMSAP1Q5T5Y3 1602 aa31.94■■■□□ 2.7
SNHG6-203ENST00000520944 NCKAP5LQ9HCH0 1330 aa31.92■■■□□ 2.7
SNHG6-203ENST00000520944 PKD2Q13563 968 aa31.91■■■□□ 2.7
SNHG6-203ENST00000520944 MYO3AQ8NEV4 1616 aa31.9■■■□□ 2.7
SNHG6-203ENST00000520944 TNRQ92752 1358 aa31.9■■■□□ 2.7
SNHG6-203ENST00000520944 FGD6Q6ZV73 1430 aa31.89■■■□□ 2.7
SNHG6-203ENST00000520944 PZPP20742 1482 aa31.89■■■□□ 2.7
SNHG6-203ENST00000520944 CEP170BQ9Y4F5 1589 aaPredicted RBP31.89■■■□□ 2.7
SNHG6-203ENST00000520944 RRP7BPQ9NSQ0 103 aa31.88■■■□□ 2.69
SNHG6-203ENST00000520944 ABCC5O15440 1437 aa31.88■■■□□ 2.69
SNHG6-203ENST00000520944 PTPN23Q9H3S7 1636 aa31.88■■■□□ 2.69
SNHG6-203ENST00000520944 A2ML1A8K2U0 1454 aa31.85■■■□□ 2.69
SNHG6-203ENST00000520944 PLA2R1Q13018 1463 aa31.84■■■□□ 2.69
SNHG6-203ENST00000520944 KIF15Q9NS87 1388 aa31.84■■■□□ 2.69
SNHG6-203ENST00000520944 ZNF142P52746 1687 aaPredicted RBP31.84■■■□□ 2.69
SNHG6-203ENST00000520944 DUOX2Q9NRD8 1548 aa31.84■■■□□ 2.69
SNHG6-203ENST00000520944 SHANK2Q9UPX8 1470 aa31.83■■■□□ 2.69
SNHG6-203ENST00000520944 DAPK1P53355 1430 aa31.82■■■□□ 2.68
SNHG6-203ENST00000520944 TCOF1Q13428 1488 aaKnown RBP31.81■■■□□ 2.68
SNHG6-203ENST00000520944 EIF2AK4Q9P2K8 1649 aaKnown RBP31.8■■■□□ 2.68
SNHG6-203ENST00000520944 CHIC2Q9UKJ5 165 aa31.8■■■□□ 2.68
SNHG6-203ENST00000520944 RNF17Q9BXT8 1623 aaKnown RBP31.79■■■□□ 2.68
SNHG6-203ENST00000520944 THEMISQ8N1K5 641 aaPredicted RBP31.77■■■□□ 2.68
SNHG6-203ENST00000520944 ABCC3O15438 1527 aa31.76■■■□□ 2.68
SNHG6-203ENST00000520944 FAM50AQ14320 339 aaKnown RBP31.76■■■□□ 2.67
SNHG6-203ENST00000520944 ANKRD30AQ9BXX3 1397 aa31.76■■■□□ 2.67
SNHG6-203ENST00000520944 DNMT1P26358 1616 aaKnown RBP31.75■■■□□ 2.67
SNHG6-203ENST00000520944 ERBINQ96RT1 1412 aa31.75■■■□□ 2.67
SNHG6-203ENST00000520944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.74■■■□□ 2.678e-25■□□□□ 9.7
SNHG6-203ENST00000520944 NLRP1Q9C000 1473 aa31.73■■■□□ 2.67
SNHG6-203ENST00000520944 CROCC2H7BZ55 1655 aa31.71■■■□□ 2.67
SNHG6-203ENST00000520944 ANKLE2Q86XL3 938 aa31.71■■■□□ 2.67
SNHG6-203ENST00000520944 ZC3H13Q5T200 1668 aaKnown RBP31.7■■■□□ 2.67
SNHG6-203ENST00000520944 ZNF335Q9H4Z2 1342 aaPredicted RBP31.69■■■□□ 2.66
SNHG6-203ENST00000520944 LTBP4Q8N2S1 1624 aa31.68■■■□□ 2.66
SNHG6-203ENST00000520944 KANK1Q14678 1352 aa31.68■■■□□ 2.66
SNHG6-203ENST00000520944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.68■■■□□ 2.66
SNHG6-203ENST00000520944 MROH1Q8NDA8 1641 aa31.67■■■□□ 2.66
SNHG6-203ENST00000520944 UGGT1Q9NYU2 1555 aa31.64■■■□□ 2.66
SNHG6-203ENST00000520944 ERVK-7P63135 1459 aa31.64■■■□□ 2.66
SNHG6-203ENST00000520944 SPATA31D1Q6ZQQ2 1576 aa31.62■■■□□ 2.65
SNHG6-203ENST00000520944 PRDM15P57071 1507 aaPredicted RBP31.6■■■□□ 2.65
SNHG6-203ENST00000520944 IQSEC2Q5JU85 1478 aa31.59■■■□□ 2.65
SNHG6-203ENST00000520944 ARHGAP31Q2M1Z3 1444 aa31.59■■■□□ 2.65
SNHG6-203ENST00000520944 CEP152O94986 1710 aa31.58■■■□□ 2.65
SNHG6-203ENST00000520944 ADGRL2O95490 1459 aa31.55■■■□□ 2.64
SNHG6-203ENST00000520944 DEPDC5O75140 1603 aa31.51■■■□□ 2.63
SNHG6-203ENST00000520944 NPHP4O75161 1426 aaPredicted RBP31.5■■■□□ 2.63
SNHG6-203ENST00000520944 POLR1AO95602 1720 aaPredicted RBP31.5■■■□□ 2.63
SNHG6-203ENST00000520944 PPARGC1BQ86YN6 1023 aaKnown RBP31.5■■■□□ 2.63
SNHG6-203ENST00000520944 NEURL4Q96JN8 1562 aa31.5■■■□□ 2.63
SNHG6-203ENST00000520944 CFAP65Q6ZU64 1925 aaKnown RBP31.49■■■□□ 2.63
SNHG6-203ENST00000520944 ANKRD50Q9ULJ7 1429 aa31.49■■■□□ 2.63
SNHG6-203ENST00000520944 UBAP1LF5GYI3 381 aa31.48■■■□□ 2.63
SNHG6-203ENST00000520944 STAG3Q9UJ98 1225 aa31.48■■■□□ 2.63
SNHG6-203ENST00000520944 MED14O60244 1454 aa31.47■■■□□ 2.63
SNHG6-203ENST00000520944 LMTK2Q8IWU2 1503 aa31.45■■■□□ 2.63
SNHG6-203ENST00000520944 TXNDC2Q86VQ3 553 aa31.42■■■□□ 2.62
SNHG6-203ENST00000520944 EID1Q9Y6B2 187 aa31.42■■■□□ 2.62
SNHG6-203ENST00000520944 VWDEQ8N2E2 1590 aa31.42■■■□□ 2.62
SNHG6-203ENST00000520944 ITGAEP38570 1179 aa31.41■■■□□ 2.62
SNHG6-203ENST00000520944 CPS1P31327 1500 aa31.39■■■□□ 2.62
SNHG6-203ENST00000520944 IDI1Q13907 227 aa31.39■■■□□ 2.62
SNHG6-203ENST00000520944 LTKP29376 864 aa31.37■■■□□ 2.61
SNHG6-203ENST00000520944 ROCK1Q13464 1354 aa31.37■■■□□ 2.61
SNHG6-203ENST00000520944 UBR1Q8IWV7 1749 aa31.37■■■□□ 2.61
SNHG6-203ENST00000520944 SCAF11Q99590 1463 aaKnown RBP31.36■■■□□ 2.61
SNHG6-203ENST00000520944 SLC52A1Q9NWF4 448 aa31.35■■■□□ 2.61
SNHG6-203ENST00000520944 IQGAP1P46940 1657 aa31.34■■■□□ 2.61
SNHG6-203ENST00000520944 EFCAB6Q5THR3 1501 aa31.33■■■□□ 2.61
SNHG6-203ENST00000520944 ARHGAP23Q9P227 1491 aa31.33■■■□□ 2.61
SNHG6-203ENST00000520944 TOM1O60784 492 aa31.32■■■□□ 2.6
SNHG6-203ENST00000520944 SLIT1O75093 1534 aa31.32■■■□□ 2.6
SNHG6-203ENST00000520944 NOS1P29475 1434 aa31.32■■■□□ 2.6
SNHG6-203ENST00000520944 TMEM2Q9UHN6 1383 aa31.31■■■□□ 2.6
SNHG6-203ENST00000520944 PIK3C2BO00750 1634 aa31.29■■■□□ 2.6
SNHG6-203ENST00000520944 RPRD2Q5VT52 1461 aaKnown RBP31.28■■■□□ 2.6
SNHG6-203ENST00000520944 SCAF1Q9H7N4 1312 aaKnown RBP31.27■■■□□ 2.6
SNHG6-203ENST00000520944 PIP4K2BP78356 416 aa31.25■■■□□ 2.59
SNHG6-203ENST00000520944 SYNMO15061 1565 aa31.25■■■□□ 2.59
SNHG6-203ENST00000520944 NUP155O75694 1391 aa31.2■■■□□ 2.59
SNHG6-203ENST00000520944 TET3O43151 1660 aa31.19■■■□□ 2.58
SNHG6-203ENST00000520944 KDM5AP29375 1690 aaKnown RBP31.19■■■□□ 2.58
SNHG6-203ENST00000520944 DISP3Q9P2K9 1392 aa31.18■■■□□ 2.58
SNHG6-203ENST00000520944 UNC13BO14795 1591 aa31.18■■■□□ 2.58
SNHG6-203ENST00000520944 HDGFP51858 240 aaKnown RBP31.17■■■□□ 2.58
SNHG6-203ENST00000520944 BCANQ96GW7 911 aa31.17■■■□□ 2.58
SNHG6-203ENST00000520944 ADGRB3O60242 1522 aa31.16■■■□□ 2.58
SNHG6-203ENST00000520944 LRRC7Q96NW7 1537 aa31.15■■■□□ 2.58
SNHG6-203ENST00000520944 CHGAP10645 457 aaKnown RBP31.14■■■□□ 2.58
SNHG6-203ENST00000520944 SLC26A8Q96RN1 970 aa31.13■■■□□ 2.57
SNHG6-203ENST00000520944 RRBP1Q9P2E9 1410 aaKnown RBP31.12■■■□□ 2.57
SNHG6-203ENST00000520944 PPP1R15AO75807 674 aaPredicted RBP31.1■■■□□ 2.57
SNHG6-203ENST00000520944 GCC2Q8IWJ2 1684 aa31.09■■■□□ 2.57
SNHG6-203ENST00000520944 HSPA1LP34931 641 aa31.09■■■□□ 2.57
SNHG6-203ENST00000520944 STRCP1A6NGW2 1772 aa31.09■■■□□ 2.57
SNHG6-203ENST00000520944 IQGAP3Q86VI3 1631 aa31.07■■■□□ 2.56
SNHG6-203ENST00000520944 KCNA6P17658 529 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms