RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ANKRD50Q9ULJ7 1429 aa16.65■□□□□ 0.26
TRAPPC9-208ENST00000520857 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
TRAPPC9-208ENST00000520857 LRPPRCP42704 1394 aaKnown RBP16.64■□□□□ 0.25
TRAPPC9-208ENST00000520857 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.251e-6■■■■■ 32.1
TRAPPC9-208ENST00000520857 CCDC146Q8IYE0 955 aa16.64■□□□□ 0.25
TRAPPC9-208ENST00000520857 PRDM2Q13029 1718 aa16.63■□□□□ 0.25
TRAPPC9-208ENST00000520857 TMF1P82094 1093 aa16.63■□□□□ 0.25
TRAPPC9-208ENST00000520857 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC9-208ENST00000520857 WASHC2CQ9Y4E1 1318 aa16.63■□□□□ 0.25
TRAPPC9-208ENST00000520857 SAMD9Q5K651 1589 aa16.62■□□□□ 0.25
TRAPPC9-208ENST00000520857 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
TRAPPC9-208ENST00000520857 URB2Q14146 1524 aaKnown RBP16.61■□□□□ 0.25
TRAPPC9-208ENST00000520857 PZPP20742 1482 aa16.6■□□□□ 0.25
TRAPPC9-208ENST00000520857 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
TRAPPC9-208ENST00000520857 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
TRAPPC9-208ENST00000520857 BECN1Q14457 450 aa16.59■□□□□ 0.25
TRAPPC9-208ENST00000520857 CHMP7Q8WUX9 453 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-208ENST00000520857 LRRIQ1Q96JM4 1722 aa16.59■□□□□ 0.25
TRAPPC9-208ENST00000520857 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
TRAPPC9-208ENST00000520857 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-208ENST00000520857 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
TRAPPC9-208ENST00000520857 BCORL1Q5H9F3 1711 aa16.58■□□□□ 0.24
TRAPPC9-208ENST00000520857 IQGAP2Q13576 1575 aa16.54■□□□□ 0.24
TRAPPC9-208ENST00000520857 GZF1Q9H116 711 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC9-208ENST00000520857 CAMSAP2Q08AD1 1489 aa16.54■□□□□ 0.24
TRAPPC9-208ENST00000520857 CCDC144AA2RUR9 1427 aa16.53■□□□□ 0.24
TRAPPC9-208ENST00000520857 APAF1O14727 1248 aa16.53■□□□□ 0.24
TRAPPC9-208ENST00000520857 RALGAPBQ86X10 1494 aa16.52■□□□□ 0.24
TRAPPC9-208ENST00000520857 BCAR3O75815 825 aa16.52■□□□□ 0.23
TRAPPC9-208ENST00000520857 C8orf34Q49A92 452 aa16.52■□□□□ 0.23
TRAPPC9-208ENST00000520857 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.23
TRAPPC9-208ENST00000520857 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
TRAPPC9-208ENST00000520857 POGKQ9P215 609 aa16.51■□□□□ 0.23
TRAPPC9-208ENST00000520857 PER1O15534 1290 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC9-208ENST00000520857 ABCA5Q8WWZ7 1642 aa16.5■□□□□ 0.23
TRAPPC9-208ENST00000520857 COG6Q9Y2V7 657 aa16.5■□□□□ 0.23
TRAPPC9-208ENST00000520857 TROQ12816 1431 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC9-208ENST00000520857 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC9-208ENST00000520857 NAP1L5Q96NT1 182 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC9-208ENST00000520857 DUSP27Q5VZP5 1158 aa16.49■□□□□ 0.23
TRAPPC9-208ENST00000520857 DNMT1P26358 1616 aaKnown RBP16.49■□□□□ 0.23
TRAPPC9-208ENST00000520857 PPP2R1AP30153 589 aa16.48■□□□□ 0.23
TRAPPC9-208ENST00000520857 KDM5CP41229 1560 aa16.48■□□□□ 0.23
TRAPPC9-208ENST00000520857 RSPH6AQ9H0K4 717 aa16.48■□□□□ 0.23
TRAPPC9-208ENST00000520857 WDR62O43379 1518 aa16.48■□□□□ 0.23
TRAPPC9-208ENST00000520857 DISP3Q9P2K9 1392 aa16.47■□□□□ 0.23
TRAPPC9-208ENST00000520857 C9orf84Q5VXU9 1444 aa16.46■□□□□ 0.23
TRAPPC9-208ENST00000520857 PANK1Q8TE04 598 aa16.46■□□□□ 0.23
TRAPPC9-208ENST00000520857 KIF14Q15058 1648 aa16.46■□□□□ 0.22
TRAPPC9-208ENST00000520857 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.22
TRAPPC9-208ENST00000520857 CLUAP1Q96AJ1 413 aa16.46■□□□□ 0.22
TRAPPC9-208ENST00000520857 NUP153P49790 1475 aaKnown RBP16.45■□□□□ 0.22
TRAPPC9-208ENST00000520857 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
TRAPPC9-208ENST00000520857 MBD5Q9P267 1494 aa16.45■□□□□ 0.22
TRAPPC9-208ENST00000520857 L1TD1Q5T7N2 865 aaKnown RBP16.44■□□□□ 0.22
TRAPPC9-208ENST00000520857 FAM43AQ8N2R8 423 aa16.43■□□□□ 0.22
TRAPPC9-208ENST00000520857 PLEKHH1Q9ULM0 1364 aa16.43■□□□□ 0.22
TRAPPC9-208ENST00000520857 CDCA8Q53HL2 280 aa16.43■□□□□ 0.22
TRAPPC9-208ENST00000520857 GPATCH8Q9UKJ3 1502 aaKnown RBP16.43■□□□□ 0.22
TRAPPC9-208ENST00000520857 RRP7AQ9Y3A4 280 aaKnown RBP16.43■□□□□ 0.22
TRAPPC9-208ENST00000520857 UHRF1BP1Q6BDS2 1440 aa16.43■□□□□ 0.22
TRAPPC9-208ENST00000520857 PLB1Q6P1J6 1458 aa16.42■□□□□ 0.22
TRAPPC9-208ENST00000520857 CENPJQ9HC77 1338 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC9-208ENST00000520857 KIAA0586Q9BVV6 1533 aa16.41■□□□□ 0.22
TRAPPC9-208ENST00000520857 IGHDP01880 384 aa16.41■□□□□ 0.22
TRAPPC9-208ENST00000520857 SLFN5Q08AF3 891 aa16.41■□□□□ 0.22
TRAPPC9-208ENST00000520857 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
TRAPPC9-208ENST00000520857 ERBINQ96RT1 1412 aa16.41■□□□□ 0.22
TRAPPC9-208ENST00000520857 TESK2Q96S53 571 aa16.4■□□□□ 0.22
TRAPPC9-208ENST00000520857 SEC24BO95487 1268 aa16.4■□□□□ 0.22
TRAPPC9-208ENST00000520857 POLR1AO95602 1720 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC9-208ENST00000520857 GOLGA6L3A6NEY3 463 aa16.39■□□□□ 0.21
TRAPPC9-208ENST00000520857 E9PSI1 815 aa16.39■□□□□ 0.21
TRAPPC9-208ENST00000520857 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.21
TRAPPC9-208ENST00000520857 CGNL1Q0VF96 1302 aa16.39■□□□□ 0.21
TRAPPC9-208ENST00000520857 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
TRAPPC9-208ENST00000520857 GLIPR1L2Q4G1C9 344 aa16.38■□□□□ 0.21
TRAPPC9-208ENST00000520857 UBE2Q2Q8WVN8 375 aa16.38■□□□□ 0.21
TRAPPC9-208ENST00000520857 SPINK5Q9NQ38 1064 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC9-208ENST00000520857 MFAP1P55081 439 aaKnown RBP16.37■□□□□ 0.21
TRAPPC9-208ENST00000520857 HSP90AA1P07900 732 aaKnown RBP16.36■□□□□ 0.21
TRAPPC9-208ENST00000520857 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
TRAPPC9-208ENST00000520857 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
TRAPPC9-208ENST00000520857 PRAG1Q86YV5 1406 aa16.35■□□□□ 0.21
TRAPPC9-208ENST00000520857 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-208ENST00000520857 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-208ENST00000520857 BLMP54132 1417 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC9-208ENST00000520857 ARHGEF12Q9NZN5 1544 aa16.33■□□□□ 0.21
TRAPPC9-208ENST00000520857 PLEKHH2Q8IVE3 1493 aa16.33■□□□□ 0.21
TRAPPC9-208ENST00000520857 PMFBP1Q8TBY8 1022 aa16.33■□□□□ 0.2
TRAPPC9-208ENST00000520857 TRIM44Q96DX7 344 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-208ENST00000520857 RAPGEF6Q8TEU7 1601 aa16.31■□□□□ 0.2
TRAPPC9-208ENST00000520857 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-208ENST00000520857 RRAGDQ9NQL2 400 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-208ENST00000520857 ZMYM4Q5VZL5 1548 aa16.3■□□□□ 0.2
TRAPPC9-208ENST00000520857 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
TRAPPC9-208ENST00000520857 ZNF608Q9ULD9 1512 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-208ENST00000520857 AMER1Q5JTC6 1135 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-208ENST00000520857 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
TRAPPC9-208ENST00000520857 MORC1Q86VD1 984 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms