RNA–Protein interactions for RNA: ENST00000520172.5

RUNX1T1-223, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-223	ENST00000520172	PHLPP1	O60346	1717 aa		13.42	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	IFFO2	Q5TF58	517 aa		13.42	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	GGT6	Q6P531	493 aa		13.42	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.41	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	CDC42BPB	Q9Y5S2	1711 aa		13.41	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	FAM135A	Q9P2D6	1515 aa		13.4	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	UGGT1	Q9NYU2	1555 aa		13.4	□□□□□ -0.26
RUNX1T1-223	ENST00000520172	PLXNC1	O60486	1568 aa		13.38	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	ZC3H13	Q5T200	1668 aa	Known RBP	13.37	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	SAMD9L	Q8IVG5	1584 aa		13.37	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.37	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	NUTM2E	B1AL46	878 aa	Predicted RBP	13.37	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.37	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.37	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.37	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	RGS12	O14924	1447 aa		13.37	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	LRRC9	Q6ZRR7	1453 aa		13.36	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	PREX2	Q70Z35	1606 aa		13.35	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	KDM5D	Q9BY66	1539 aa		13.35	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	SPATA31A6	Q5VVP1	1343 aa		13.35	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	A2M	P01023	1474 aa		13.35	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	NLRP1	Q9C000	1473 aa		13.34	□□□□□ -0.27
RUNX1T1-223	ENST00000520172	SPAG9	O60271	1321 aa	Known RBP	13.33	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	COL16A1	Q07092	1604 aa	Predicted RBP	13.32	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.32	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	ATP7A	Q04656	1500 aa		13.32	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	CLIP1	P30622	1438 aa		13.31	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	TRO	Q12816	1431 aa	Predicted RBP	13.31	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	PZP	P20742	1482 aa		13.31	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.31	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	LRP5	O75197	1615 aa		13.31	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	TMEM94	Q12767	1356 aa		13.31	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	ATAD2	Q6PL18	1390 aa		13.31	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	EP400	Q96L91	3159 aa		13.3	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	FGD6	Q6ZV73	1430 aa		13.29	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	MIA2	Q96PC5	1412 aa		13.29	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	AFF2	P51816	1311 aa		13.28	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	MAP3K1	Q13233	1512 aa		13.28	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	SYCP2	Q9BX26	1530 aa		13.28	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	INO80	Q9ULG1	1556 aa	Predicted RBP	13.28	□□□□□ -0.28
RUNX1T1-223	ENST00000520172	SHPRH	Q149N8	1683 aa		13.27	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	SCAF11	Q99590	1463 aa	Known RBP	13.25	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	ADGB	Q8N7X0	1667 aa		13.24	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	RBM6	P78332	1123 aa	Known RBP	13.24	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	YY1	P25490	414 aa		13.23	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	SLAIN2	Q9P270	581 aa		13.23	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.23	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	CDC42BPA	Q5VT25	1732 aa		13.22	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	TIAM1	Q13009	1591 aa		13.22	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	PROSER2	Q86WR7	435 aa	Predicted RBP	13.21	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	QTRT2	Q9H974	415 aa	Known RBP	13.21	□□□□□ -0.29
RUNX1T1-223	ENST00000520172	MSH6	P52701	1360 aa		13.2	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	CHIC1	Q5VXU3	224 aa		13.18	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	UBR1	Q8IWV7	1749 aa		13.18	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	WASHC2C	Q9Y4E1	1318 aa		13.17	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	LTK	P29376	864 aa		13.17	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	NGLY1	Q96IV0	654 aa		13.17	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	PRDM15	P57071	1507 aa	Predicted RBP	13.17	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	NWD1	Q149M9	1564 aa		13.16	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	TXNDC2	Q86VQ3	553 aa		13.16	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	CCDC125	Q86Z20	511 aa		13.16	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	C8orf37	Q96NL8	207 aa		13.16	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.16	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	KCNA6	P17658	529 aa		13.15	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	LRRIQ1	Q96JM4	1722 aa		13.15	□□□□□ -0.3
RUNX1T1-223	ENST00000520172	NHSL1	Q5SYE7	1610 aa		13.14	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	NCOA2	Q15596	1464 aa		13.14	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	FMN1	Q68DA7	1419 aa		13.13	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	ABCC3	O15438	1527 aa		13.13	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	KDM5A	P29375	1690 aa	Known RBP	13.13	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	NKTR	P30414	1462 aa	Known RBP	13.13	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	ARHGAP23	Q9P227	1491 aa		13.13	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	KIF3B	O15066	747 aa		13.13	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	SLIT1	O75093	1534 aa		13.13	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	DIP2A	Q14689	1571 aa		13.12	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	SENP3-EIF4A1	A0A087X0R7	540 aa		13.12	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	EID1	Q9Y6B2	187 aa		13.11	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	DHX29	Q7Z478	1369 aa	Known RBP	13.1	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	KIAA1107	Q9UPP5	1409 aa		13.1	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	ERVK-7	P63135	1459 aa		13.1	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	PLEKHH2	Q8IVE3	1493 aa		13.1	□□□□□ -0.31
RUNX1T1-223	ENST00000520172	PSD	A5PKW4	1024 aa	Predicted RBP	13.08	□□□□□ -0.32
RUNX1T1-223	ENST00000520172	CSRNP3	Q8WYN3	585 aa		13.07	□□□□□ -0.32
RUNX1T1-223	ENST00000520172	HRC	P23327	699 aa		13.06	□□□□□ -0.32
RUNX1T1-223	ENST00000520172	DEFB132	Q7Z7B7	95 aa		13.06	□□□□□ -0.32
RUNX1T1-223	ENST00000520172	SLC26A8	Q96RN1	970 aa		13.06	□□□□□ -0.32
RUNX1T1-223	ENST00000520172	CFAP65	Q6ZU64	1925 aa	Known RBP	13.05	□□□□□ -0.32
RUNX1T1-223	ENST00000520172	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.05	□□□□□ -0.32
RUNX1T1-223	ENST00000520172	BLM	P54132	1417 aa	Predicted RBP	13.05	□□□□□ -0.32
RUNX1T1-223	ENST00000520172	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.03	□□□□□ -0.32
RUNX1T1-223	ENST00000520172	MAST1	Q9Y2H9	1570 aa		13.03	□□□□□ -0.32
RUNX1T1-223	ENST00000520172	C14orf37	Q86TY3	774 aa		13.02	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	TRPC5	Q9UL62	973 aa	Predicted RBP	13.02	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	BCL9L	Q86UU0	1499 aa		13.02	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	ADAMTS2	O95450	1211 aa		13.01	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.01	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	USP21	Q9UK80	565 aa		13.01	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	TMEM2	Q9UHN6	1383 aa		13.01	□□□□□ -0.33
RUNX1T1-223	ENST00000520172	TET3	O43151	1660 aa		13.01	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms