RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 CEBPAP49715 358 aaPredicted RBP28.13■■■□□ 2.09
SREK1-207ENST00000520058 RRP7BPQ9NSQ0 103 aa28.13■■■□□ 2.09
SREK1-207ENST00000520058 RNF17Q9BXT8 1623 aaKnown RBP28.12■■■□□ 2.09
SREK1-207ENST00000520058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.11■■■□□ 2.09
SREK1-207ENST00000520058 ERBINQ96RT1 1412 aa28.11■■■□□ 2.09
SREK1-207ENST00000520058 ZMYM3Q14202 1370 aa28.11■■■□□ 2.09
SREK1-207ENST00000520058 WASHC2CQ9Y4E1 1318 aa28.1■■■□□ 2.09
SREK1-207ENST00000520058 KDM5DQ9BY66 1539 aa28.09■■■□□ 2.09
SREK1-207ENST00000520058 ZC3H13Q5T200 1668 aaKnown RBP28.09■■■□□ 2.09
SREK1-207ENST00000520058 ADGRL2O95490 1459 aa28.08■■■□□ 2.09
SREK1-207ENST00000520058 NCOA1Q15788 1441 aa28.08■■■□□ 2.09
SREK1-207ENST00000520058 LMTK3Q96Q04 1460 aa28.04■■■□□ 2.08
SREK1-207ENST00000520058 NPATQ14207 1427 aa28.04■■■□□ 2.08
SREK1-207ENST00000520058 UHRF1BP1Q6BDS2 1440 aa28.03■■■□□ 2.08
SREK1-207ENST00000520058 RRBP1Q9P2E9 1410 aaKnown RBP28.01■■■□□ 2.08
SREK1-207ENST00000520058 ITGAEP38570 1179 aa28.01■■■□□ 2.07
SREK1-207ENST00000520058 KANK1Q14678 1352 aa27.99■■■□□ 2.07
SREK1-207ENST00000520058 ROCK1Q13464 1354 aa27.99■■■□□ 2.07
SREK1-207ENST00000520058 CEP152O94986 1710 aa27.98■■■□□ 2.07
SREK1-207ENST00000520058 DEPDC5O75140 1603 aa27.97■■■□□ 2.07
SREK1-207ENST00000520058 PRDM15P57071 1507 aaPredicted RBP27.96■■■□□ 2.07
SREK1-207ENST00000520058 ANKRD50Q9ULJ7 1429 aa27.95■■■□□ 2.07
SREK1-207ENST00000520058 MROH1Q8NDA8 1641 aa27.95■■■□□ 2.06
SREK1-207ENST00000520058 PTPRKQ15262 1439 aa27.94■■■□□ 2.06
SREK1-207ENST00000520058 ABCC3O15438 1527 aa27.94■■■□□ 2.06
SREK1-207ENST00000520058 PZPP20742 1482 aa27.94■■■□□ 2.06
SREK1-207ENST00000520058 CFAP65Q6ZU64 1925 aaKnown RBP27.94■■■□□ 2.06
SREK1-207ENST00000520058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.93■■■□□ 2.062e-7■■■□□ 16.1
SREK1-207ENST00000520058 CAMSAP1Q5T5Y3 1602 aa27.92■■■□□ 2.06
SREK1-207ENST00000520058 MYO3AQ8NEV4 1616 aa27.89■■■□□ 2.06
SREK1-207ENST00000520058 HSPA2P54652 639 aa27.89■■■□□ 2.06
SREK1-207ENST00000520058 ZNF142P52746 1687 aaPredicted RBP27.87■■■□□ 2.05
SREK1-207ENST00000520058 TNRQ92752 1358 aa27.84■■■□□ 2.05
SREK1-207ENST00000520058 CEP170BQ9Y4F5 1589 aaPredicted RBP27.82■■■□□ 2.04
SREK1-207ENST00000520058 FBXO31Q5XUX0 539 aaPredicted RBP27.81■■■□□ 2.04
SREK1-207ENST00000520058 ARHGAP31Q2M1Z3 1444 aa27.8■■■□□ 2.04
SREK1-207ENST00000520058 UNC13BO14795 1591 aa27.8■■■□□ 2.04
SREK1-207ENST00000520058 VWDEQ8N2E2 1590 aa27.79■■■□□ 2.04
SREK1-207ENST00000520058 LMTK2Q8IWU2 1503 aa27.79■■■□□ 2.04
SREK1-207ENST00000520058 GCC2Q8IWJ2 1684 aa27.78■■■□□ 2.04
SREK1-207ENST00000520058 SPATA31D1Q6ZQQ2 1576 aa27.77■■■□□ 2.04
SREK1-207ENST00000520058 A2ML1A8K2U0 1454 aa27.77■■■□□ 2.04
SREK1-207ENST00000520058 NLRP1Q9C000 1473 aa27.77■■■□□ 2.04
SREK1-207ENST00000520058 DMRT2Q9Y5R5 561 aa27.77■■■□□ 2.04
SREK1-207ENST00000520058 ERVK-7P63135 1459 aa27.75■■■□□ 2.03
SREK1-207ENST00000520058 TET3O43151 1660 aa27.75■■■□□ 2.03
SREK1-207ENST00000520058 STRCQ7RTU9 1775 aa27.74■■■□□ 2.03
SREK1-207ENST00000520058 EFCAB6Q5THR3 1501 aa27.72■■■□□ 2.03
SREK1-207ENST00000520058 IQGAP3Q86VI3 1631 aa27.7■■■□□ 2.03
SREK1-207ENST00000520058 RPRD2Q5VT52 1461 aaKnown RBP27.69■■■□□ 2.02
SREK1-207ENST00000520058 PLA2R1Q13018 1463 aa27.68■■■□□ 2.02
SREK1-207ENST00000520058 UGGT1Q9NYU2 1555 aa27.68■■■□□ 2.02
SREK1-207ENST00000520058 THEMISQ8N1K5 641 aaPredicted RBP27.67■■■□□ 2.02
SREK1-207ENST00000520058 NUP155O75694 1391 aa27.67■■■□□ 2.02
SREK1-207ENST00000520058 HFM1A2PYH4 1435 aa27.67■■■□□ 2.02
SREK1-207ENST00000520058 NAIPQ13075 1403 aa27.67■■■□□ 2.02
SREK1-207ENST00000520058 PKD2Q13563 968 aa27.64■■■□□ 2.02
SREK1-207ENST00000520058 POLR1AO95602 1720 aaPredicted RBP27.64■■■□□ 2.01
SREK1-207ENST00000520058 E9PCH4 1651 aa27.6■■■□□ 2.01
SREK1-207ENST00000520058 STAG3Q9UJ98 1225 aa27.6■■■□□ 2.01
SREK1-207ENST00000520058 UBR1Q8IWV7 1749 aa27.6■■■□□ 2.01
SREK1-207ENST00000520058 PTPRTO14522 1441 aa27.59■■■□□ 2.01
SREK1-207ENST00000520058 KDM5AP29375 1690 aaKnown RBP27.59■■■□□ 2.01
SREK1-207ENST00000520058 SLC52A1Q9NWF4 448 aa27.57■■■□□ 2
SREK1-207ENST00000520058 ACIN1Q9UKV3 1341 aaKnown RBP27.57■■■□□ 2
SREK1-207ENST00000520058 ANKLE2Q86XL3 938 aa27.56■■■□□ 2
SREK1-207ENST00000520058 NOS1P29475 1434 aa27.56■■■□□ 2
SREK1-207ENST00000520058 PIK3C2BO00750 1634 aa27.56■■■□□ 2
SREK1-207ENST00000520058 TRIM52Q96A61 297 aa27.55■■■□□ 2
SREK1-207ENST00000520058 NCKAP5LQ9HCH0 1330 aa27.55■■■□□ 2
SREK1-207ENST00000520058 SYNMO15061 1565 aa27.54■■■□□ 2
SREK1-207ENST00000520058 IDI1Q13907 227 aa27.49■■□□□ 1.99
SREK1-207ENST00000520058 SPHKAPQ2M3C7 1700 aa27.49■■□□□ 1.99
SREK1-207ENST00000520058 EID1Q9Y6B2 187 aa27.47■■□□□ 1.99
SREK1-207ENST00000520058 ADGRB3O60242 1522 aa27.45■■□□□ 1.98
SREK1-207ENST00000520058 MYO5BQ9ULV0 1848 aa27.44■■□□□ 1.98
SREK1-207ENST00000520058 SETD5Q9C0A6 1442 aa27.43■■□□□ 1.98
SREK1-207ENST00000520058 SLIT1O75093 1534 aa27.43■■□□□ 1.98
SREK1-207ENST00000520058 IQGAP1P46940 1657 aa27.43■■□□□ 1.98
SREK1-207ENST00000520058 SLC4A1APQ9BWU0 796 aaKnown RBP27.42■■□□□ 1.98
SREK1-207ENST00000520058 NEURL4Q96JN8 1562 aa27.42■■□□□ 1.98
SREK1-207ENST00000520058 HDGFP51858 240 aaKnown RBP27.41■■□□□ 1.98
SREK1-207ENST00000520058 MED14O60244 1454 aa27.4■■□□□ 1.98
SREK1-207ENST00000520058 TXNDC2Q86VQ3 553 aa27.4■■□□□ 1.98
SREK1-207ENST00000520058 NPHP4O75161 1426 aaPredicted RBP27.4■■□□□ 1.98
SREK1-207ENST00000520058 SCAF11Q99590 1463 aaKnown RBP27.39■■□□□ 1.98
SREK1-207ENST00000520058 ARHGAP23Q9P227 1491 aa27.39■■□□□ 1.98
SREK1-207ENST00000520058 TMEM2Q9UHN6 1383 aa27.39■■□□□ 1.98
SREK1-207ENST00000520058 CHGAP10645 457 aaKnown RBP27.38■■□□□ 1.97
SREK1-207ENST00000520058 KIF1BO60333 1816 aa27.37■■□□□ 1.97
SREK1-207ENST00000520058 TMEM131LA2VDJ0 1609 aa27.36■■□□□ 1.97
SREK1-207ENST00000520058 CERKQ8TCT0 537 aa27.33■■□□□ 1.97
SREK1-207ENST00000520058 TRPM2O94759 1503 aa27.31■■□□□ 1.96
SREK1-207ENST00000520058 RAB3GAP2Q9H2M9 1393 aa27.3■■□□□ 1.96
SREK1-207ENST00000520058 PPP1R15AO75807 674 aaPredicted RBP27.29■■□□□ 1.96
SREK1-207ENST00000520058 LTKP29376 864 aa27.29■■□□□ 1.96
SREK1-207ENST00000520058 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.28■■□□□ 1.96
SREK1-207ENST00000520058 MPHOSPH9Q99550 1183 aa27.28■■□□□ 1.96
SREK1-207ENST00000520058 LTBP4Q8N2S1 1624 aa27.27■■□□□ 1.96
SREK1-207ENST00000520058 ZNF335Q9H4Z2 1342 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms