RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 MLH3Q9UHC1 1453 aa12.15□□□□□ -0.46
CTNNA1-216ENST00000519489 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.47
CTNNA1-216ENST00000519489 FAM135BQ49AJ0 1406 aa12.14□□□□□ -0.47
CTNNA1-216ENST00000519489 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
CTNNA1-216ENST00000519489 MROH2AA6NES4 1674 aa12.13□□□□□ -0.47
CTNNA1-216ENST00000519489 IFFO2Q5TF58 517 aa12.13□□□□□ -0.47
CTNNA1-216ENST00000519489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.12□□□□□ -0.47
CTNNA1-216ENST00000519489 NPHP4O75161 1426 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-216ENST00000519489 LRP6O75581 1613 aa12.11□□□□□ -0.47
CTNNA1-216ENST00000519489 MED14O60244 1454 aa12.09□□□□□ -0.47
CTNNA1-216ENST00000519489 SUPT6HQ7KZ85 1726 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-216ENST00000519489 SAMD9Q5K651 1589 aa12.09□□□□□ -0.47
CTNNA1-216ENST00000519489 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
CTNNA1-216ENST00000519489 ANKLE2Q86XL3 938 aa12.08□□□□□ -0.48
CTNNA1-216ENST00000519489 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
CTNNA1-216ENST00000519489 CDK13Q14004 1512 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-216ENST00000519489 POLR1AO95602 1720 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-216ENST00000519489 FAM9AQ8IZU1 332 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-216ENST00000519489 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-216ENST00000519489 CLTCQ00610 1675 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-216ENST00000519489 RXRBP28702 533 aa12.06□□□□□ -0.48
CTNNA1-216ENST00000519489 PRXQ9BXM0 1461 aa12.06□□□□□ -0.48
CTNNA1-216ENST00000519489 ZRANB1Q9UGI0 708 aa12.05□□□□□ -0.48
CTNNA1-216ENST00000519489 ZNF772Q68DY9 489 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-216ENST00000519489 ABCC1P33527 1531 aa12.04□□□□□ -0.48
CTNNA1-216ENST00000519489 KIDINS220Q9ULH0 1771 aa12.04□□□□□ -0.48
CTNNA1-216ENST00000519489 CDK12Q9NYV4 1490 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-216ENST00000519489 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
CTNNA1-216ENST00000519489 SYNMO15061 1565 aa12.03□□□□□ -0.48
CTNNA1-216ENST00000519489 RGS12O14924 1447 aa12.03□□□□□ -0.48
CTNNA1-216ENST00000519489 JCADQ9P266 1359 aa12.02□□□□□ -0.49
CTNNA1-216ENST00000519489 XIRP1Q702N8 1843 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-216ENST00000519489 TNRQ92752 1358 aa12.01□□□□□ -0.49
CTNNA1-216ENST00000519489 GGT6Q6P531 493 aa12□□□□□ -0.49
CTNNA1-216ENST00000519489 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
CTNNA1-216ENST00000519489 ARHGAP5Q13017 1502 aa12□□□□□ -0.49
CTNNA1-216ENST00000519489 ROBO1Q9Y6N7 1651 aa12□□□□□ -0.49
CTNNA1-216ENST00000519489 DEPDC5O75140 1603 aa11.99□□□□□ -0.49
CTNNA1-216ENST00000519489 KIF14Q15058 1648 aa11.99□□□□□ -0.49
CTNNA1-216ENST00000519489 IQGAP1P46940 1657 aa11.97□□□□□ -0.49
CTNNA1-216ENST00000519489 THEMISQ8N1K5 641 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-216ENST00000519489 MYO5CQ9NQX4 1742 aa11.97□□□□□ -0.49
CTNNA1-216ENST00000519489 RANGAP1P46060 587 aaPredicted RBP11.96□□□□□ -0.49
CTNNA1-216ENST00000519489 TMEM94Q12767 1356 aa11.95□□□□□ -0.5
CTNNA1-216ENST00000519489 PLXNC1O60486 1568 aa11.95□□□□□ -0.5
CTNNA1-216ENST00000519489 ITSN2Q9NZM3 1697 aa11.94□□□□□ -0.5
CTNNA1-216ENST00000519489 NUTM2BA6NNL0 878 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-216ENST00000519489 NUTM2EB1AL46 878 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-216ENST00000519489 MEX3CQ5U5Q3 659 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-216ENST00000519489 NUTM2DQ5VT03 806 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-216ENST00000519489 NUTM2AQ8IVF1 878 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-216ENST00000519489 MAP3K1Q13233 1512 aa11.93□□□□□ -0.5
CTNNA1-216ENST00000519489 ZC3H13Q5T200 1668 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-216ENST00000519489 SAMD9LQ8IVG5 1584 aa11.92□□□□□ -0.5
CTNNA1-216ENST00000519489 EP400Q96L91 3159 aa11.92□□□□□ -0.5
CTNNA1-216ENST00000519489 AFF2P51816 1311 aa11.92□□□□□ -0.5
CTNNA1-216ENST00000519489 SPATA31A6Q5VVP1 1343 aa11.92□□□□□ -0.5
CTNNA1-216ENST00000519489 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
CTNNA1-216ENST00000519489 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
CTNNA1-216ENST00000519489 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
CTNNA1-216ENST00000519489 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-216ENST00000519489 COL16A1Q07092 1604 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-216ENST00000519489 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
CTNNA1-216ENST00000519489 MIA2Q96PC5 1412 aa11.91□□□□□ -0.5
CTNNA1-216ENST00000519489 A2MP01023 1474 aa11.9□□□□□ -0.5
CTNNA1-216ENST00000519489 LTKP29376 864 aa11.9□□□□□ -0.5
CTNNA1-216ENST00000519489 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-216ENST00000519489 CDC42BPBQ9Y5S2 1711 aa11.89□□□□□ -0.51
CTNNA1-216ENST00000519489 KDM5DQ9BY66 1539 aa11.89□□□□□ -0.51
CTNNA1-216ENST00000519489 FAM135AQ9P2D6 1515 aa11.89□□□□□ -0.51
CTNNA1-216ENST00000519489 PHLPP1O60346 1717 aa11.89□□□□□ -0.51
CTNNA1-216ENST00000519489 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
CTNNA1-216ENST00000519489 SLAIN2Q9P270 581 aa11.88□□□□□ -0.51
CTNNA1-216ENST00000519489 PZPP20742 1482 aa11.88□□□□□ -0.51
CTNNA1-216ENST00000519489 SPAG9O60271 1321 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-216ENST00000519489 ATP7AQ04656 1500 aa11.87□□□□□ -0.51
CTNNA1-216ENST00000519489 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-216ENST00000519489 QTRT2Q9H974 415 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-216ENST00000519489 ATAD2Q6PL18 1390 aa11.87□□□□□ -0.51
CTNNA1-216ENST00000519489 NLRP1Q9C000 1473 aa11.87□□□□□ -0.51
CTNNA1-216ENST00000519489 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-216ENST00000519489 FGD6Q6ZV73 1430 aa11.86□□□□□ -0.51
CTNNA1-216ENST00000519489 LRP5O75197 1615 aa11.86□□□□□ -0.51
CTNNA1-216ENST00000519489 YY1P25490 414 aa11.86□□□□□ -0.51
CTNNA1-216ENST00000519489 HNRNPMP52272 730 aaKnown RBP eCLIP11.86□□□□□ -0.51
CTNNA1-216ENST00000519489 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
CTNNA1-216ENST00000519489 SCAF11Q99590 1463 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-216ENST00000519489 PROSER2Q86WR7 435 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-216ENST00000519489 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
CTNNA1-216ENST00000519489 PREX2Q70Z35 1606 aa11.8□□□□□ -0.52
CTNNA1-216ENST00000519489 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
CTNNA1-216ENST00000519489 KCNA6P17658 529 aa11.8□□□□□ -0.52
CTNNA1-216ENST00000519489 DEFB132Q7Z7B7 95 aa11.8□□□□□ -0.52
CTNNA1-216ENST00000519489 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-216ENST00000519489 SYCP2Q9BX26 1530 aa11.8□□□□□ -0.52
CTNNA1-216ENST00000519489 DIP2AQ14689 1571 aa11.79□□□□□ -0.52
CTNNA1-216ENST00000519489 INO80Q9ULG1 1556 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-216ENST00000519489 TXNDC2Q86VQ3 553 aa11.79□□□□□ -0.52
CTNNA1-216ENST00000519489 ARHGAP23Q9P227 1491 aa11.78□□□□□ -0.52
CTNNA1-216ENST00000519489 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms