RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 EIF2AK4Q9P2K8 1649 aaKnown RBP21.09■□□□□ 0.97
CLN8-204ENST00000519254 MPHOSPH9Q99550 1183 aa21.09■□□□□ 0.97
CLN8-204ENST00000519254 PZPP20742 1482 aa21.09■□□□□ 0.97
CLN8-204ENST00000519254 SLC4A1APQ9BWU0 796 aaKnown RBP21.08■□□□□ 0.97
CLN8-204ENST00000519254 ARHGEF40Q8TER5 1519 aa21.07■□□□□ 0.96
CLN8-204ENST00000519254 KDM5DQ9BY66 1539 aa21.06■□□□□ 0.96
CLN8-204ENST00000519254 ATP10AO60312 1499 aa21.06■□□□□ 0.96
CLN8-204ENST00000519254 FAM135AQ9P2D6 1515 aa21.04■□□□□ 0.96
CLN8-204ENST00000519254 FOXD1Q16676 465 aa21.04■□□□□ 0.96
CLN8-204ENST00000519254 SIN3AQ96ST3 1273 aa21.04■□□□□ 0.96
CLN8-204ENST00000519254 DEPDC5O75140 1603 aa21.03■□□□□ 0.96
CLN8-204ENST00000519254 IQGAP3Q86VI3 1631 aa21.02■□□□□ 0.95
CLN8-204ENST00000519254 RNF17Q9BXT8 1623 aaKnown RBP21.01■□□□□ 0.95
CLN8-204ENST00000519254 GGT6Q6P531 493 aa21■□□□□ 0.95
CLN8-204ENST00000519254 MROH1Q8NDA8 1641 aa21■□□□□ 0.95
CLN8-204ENST00000519254 ZNF316A6NFI3 1004 aaPredicted RBP21■□□□□ 0.95
CLN8-204ENST00000519254 PKD2Q13563 968 aa21■□□□□ 0.95
CLN8-204ENST00000519254 PRDM15P57071 1507 aaPredicted RBP21■□□□□ 0.95
CLN8-204ENST00000519254 KANK1Q14678 1352 aa20.99■□□□□ 0.95
CLN8-204ENST00000519254 BCORL1Q5H9F3 1711 aa20.99■□□□□ 0.95
CLN8-204ENST00000519254 NEUROD1Q13562 356 aa20.98■□□□□ 0.95
CLN8-204ENST00000519254 REREQ9P2R6 1566 aa20.98■□□□□ 0.95
CLN8-204ENST00000519254 SIGLEC1Q9BZZ2 1709 aa20.97■□□□□ 0.95
CLN8-204ENST00000519254 VWDEQ8N2E2 1590 aa20.94■□□□□ 0.94
CLN8-204ENST00000519254 TIMELESSQ9UNS1 1208 aa20.94■□□□□ 0.94
CLN8-204ENST00000519254 CEP152O94986 1710 aa20.93■□□□□ 0.94
CLN8-204ENST00000519254 AGLP35573 1532 aa20.92■□□□□ 0.94
CLN8-204ENST00000519254 ARID4BQ4LE39 1312 aaPredicted RBP20.91■□□□□ 0.94
CLN8-204ENST00000519254 TET3O43151 1660 aa20.9■□□□□ 0.94
CLN8-204ENST00000519254 MLECQ14165 292 aa20.9■□□□□ 0.94
CLN8-204ENST00000519254 WASHC2CQ9Y4E1 1318 aa20.9■□□□□ 0.94
CLN8-204ENST00000519254 ANKRD30BQ9BXX2 1392 aa20.89■□□□□ 0.94
CLN8-204ENST00000519254 E9PCH4 1651 aa20.88■□□□□ 0.93
CLN8-204ENST00000519254 ABCC3O15438 1527 aa20.88■□□□□ 0.93
CLN8-204ENST00000519254 LMTK2Q8IWU2 1503 aa20.86■□□□□ 0.93
CLN8-204ENST00000519254 EFCAB6Q5THR3 1501 aa20.85■□□□□ 0.93
CLN8-204ENST00000519254 DIEXFQ68CQ4 756 aaKnown RBP20.84■□□□□ 0.93
CLN8-204ENST00000519254 ZC3H13Q5T200 1668 aaKnown RBP20.84■□□□□ 0.93
CLN8-204ENST00000519254 PPP1R15AO75807 674 aaPredicted RBP20.83■□□□□ 0.93
CLN8-204ENST00000519254 CAMSAP1Q5T5Y3 1602 aa20.83■□□□□ 0.93
CLN8-204ENST00000519254 TONSLQ96HA7 1378 aa20.82■□□□□ 0.92
CLN8-204ENST00000519254 CLTCQ00610 1675 aaKnown RBP20.79■□□□□ 0.92
CLN8-204ENST00000519254 PLA2R1Q13018 1463 aa20.79■□□□□ 0.92
CLN8-204ENST00000519254 RPRD2Q5VT52 1461 aaKnown RBP20.78■□□□□ 0.92
CLN8-204ENST00000519254 SPHKAPQ2M3C7 1700 aa20.78■□□□□ 0.92
CLN8-204ENST00000519254 NPATQ14207 1427 aa20.78■□□□□ 0.92
CLN8-204ENST00000519254 ESF1Q9H501 851 aaKnown RBP20.77■□□□□ 0.92
CLN8-204ENST00000519254 CCDC144AA2RUR9 1427 aa20.77■□□□□ 0.92
CLN8-204ENST00000519254 PPP6R1Q9UPN7 881 aa20.76■□□□□ 0.91
CLN8-204ENST00000519254 CFAP65Q6ZU64 1925 aaKnown RBP20.75■□□□□ 0.91
CLN8-204ENST00000519254 TRPM2O94759 1503 aa20.74■□□□□ 0.91
CLN8-204ENST00000519254 PTPRTO14522 1441 aa20.73■□□□□ 0.91
CLN8-204ENST00000519254 ARHGAP31Q2M1Z3 1444 aa20.71■□□□□ 0.91
CLN8-204ENST00000519254 UGGT1Q9NYU2 1555 aa20.7■□□□□ 0.9
CLN8-204ENST00000519254 CLTCL1P53675 1640 aa20.7■□□□□ 0.9
CLN8-204ENST00000519254 FER1L4A9Z1Z3 1794 aa20.67■□□□□ 0.9
CLN8-204ENST00000519254 PREX1Q8TCU6 1659 aa20.67■□□□□ 0.9
CLN8-204ENST00000519254 L3MBTL2Q969R5 705 aa20.67■□□□□ 0.9
CLN8-204ENST00000519254 CNTLNQ9NXG0 1405 aa20.67■□□□□ 0.9
CLN8-204ENST00000519254 FBXO31Q5XUX0 539 aaPredicted RBP20.67■□□□□ 0.9
CLN8-204ENST00000519254 ZMYM3Q14202 1370 aa20.65■□□□□ 0.9
CLN8-204ENST00000519254 NOS1P29475 1434 aa20.65■□□□□ 0.9
CLN8-204ENST00000519254 SYNMO15061 1565 aa20.65■□□□□ 0.9
CLN8-204ENST00000519254 ERVK-7P63135 1459 aa20.64■□□□□ 0.89
CLN8-204ENST00000519254 RGL3Q3MIN7 710 aa20.64■□□□□ 0.89
CLN8-204ENST00000519254 MROH2AA6NES4 1674 aa20.62■□□□□ 0.89
CLN8-204ENST00000519254 PLPPR3Q6T4P5 718 aa20.62■□□□□ 0.89
CLN8-204ENST00000519254 MADDQ8WXG6 1647 aa20.62■□□□□ 0.89
CLN8-204ENST00000519254 CHGAP10645 457 aaKnown RBP20.6■□□□□ 0.89
CLN8-204ENST00000519254 KIF1BO60333 1816 aa20.6■□□□□ 0.89
CLN8-204ENST00000519254 RIMS1Q86UR5 1692 aaKnown RBP20.59■□□□□ 0.89
CLN8-204ENST00000519254 SPATA31E1Q6ZUB1 1445 aa20.59■□□□□ 0.89
CLN8-204ENST00000519254 SPATA31D1Q6ZQQ2 1576 aa20.58■□□□□ 0.89
CLN8-204ENST00000519254 PIK3C2BO00750 1634 aa20.58■□□□□ 0.89
CLN8-204ENST00000519254 CEBPAP49715 358 aaPredicted RBP20.58■□□□□ 0.89
CLN8-204ENST00000519254 DCAF11Q8TEB1 546 aa20.58■□□□□ 0.89
CLN8-204ENST00000519254 KDM2AQ9Y2K7 1162 aa20.57■□□□□ 0.88
CLN8-204ENST00000519254 C3P01024 1663 aa20.57■□□□□ 0.88
CLN8-204ENST00000519254 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
CLN8-204ENST00000519254 ADAMTSL3P82987 1691 aa20.56■□□□□ 0.88
CLN8-204ENST00000519254 IDI1Q13907 227 aa20.55■□□□□ 0.88
CLN8-204ENST00000519254 SLC52A1Q9NWF4 448 aa20.54■□□□□ 0.88
CLN8-204ENST00000519254 ADGRB3O60242 1522 aa20.54■□□□□ 0.88
CLN8-204ENST00000519254 TNRQ92752 1358 aa20.52■□□□□ 0.88
CLN8-204ENST00000519254 NBPF8Q3BBV2 869 aa20.51■□□□□ 0.87
CLN8-204ENST00000519254 MIER1Q8N108 512 aa20.51■□□□□ 0.87
CLN8-204ENST00000519254 NEURL4Q96JN8 1562 aa20.5■□□□□ 0.87
CLN8-204ENST00000519254 HIRIP3Q9BW71 556 aaPredicted RBP20.5■□□□□ 0.87
CLN8-204ENST00000519254 STAG3Q9UJ98 1225 aa20.49■□□□□ 0.87
CLN8-204ENST00000519254 MYO5BQ9ULV0 1848 aa20.48■□□□□ 0.87
CLN8-204ENST00000519254 TMEM131LA2VDJ0 1609 aa20.47■□□□□ 0.87
CLN8-204ENST00000519254 UHRF1BP1Q6BDS2 1440 aa20.44■□□□□ 0.86
CLN8-204ENST00000519254 IFT172Q9UG01 1749 aa20.44■□□□□ 0.86
CLN8-204ENST00000519254 PRAG1Q86YV5 1406 aa20.44■□□□□ 0.86
CLN8-204ENST00000519254 PPLO60437 1756 aa20.43■□□□□ 0.86
CLN8-204ENST00000519254 HSPA5P11021 654 aaKnown RBP20.41■□□□□ 0.86
CLN8-204ENST00000519254 NUTM2DQ5VT03 806 aaPredicted RBP20.41■□□□□ 0.86
CLN8-204ENST00000519254 A2ML1A8K2U0 1454 aa20.4■□□□□ 0.86
CLN8-204ENST00000519254 PTPRMP28827 1452 aa20.4■□□□□ 0.86
CLN8-204ENST00000519254 MYOM2P54296 1465 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms