RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 RSPH4AQ5TD94 716 aa30.46■■■□□ 2.47
CTNNA1-213ENST00000519113 DNMT1P26358 1616 aaKnown RBP30.46■■■□□ 2.47
CTNNA1-213ENST00000519113 FBXO31Q5XUX0 539 aaPredicted RBP30.44■■■□□ 2.46
CTNNA1-213ENST00000519113 WASHC2CQ9Y4E1 1318 aa30.43■■■□□ 2.46
CTNNA1-213ENST00000519113 CCDC141Q6ZP82 1450 aa30.41■■■□□ 2.46
CTNNA1-213ENST00000519113 PZPP20742 1482 aa30.4■■■□□ 2.46
CTNNA1-213ENST00000519113 TOM1O60784 492 aa30.4■■■□□ 2.46
CTNNA1-213ENST00000519113 ANKLE2Q86XL3 938 aa30.4■■■□□ 2.46
CTNNA1-213ENST00000519113 FAM135AQ9P2D6 1515 aa30.4■■■□□ 2.46
CTNNA1-213ENST00000519113 KDM5DQ9BY66 1539 aa30.38■■■□□ 2.45
CTNNA1-213ENST00000519113 THEMISQ8N1K5 641 aaPredicted RBP30.38■■■□□ 2.45
CTNNA1-213ENST00000519113 SCAF1Q9H7N4 1312 aaKnown RBP30.38■■■□□ 2.45
CTNNA1-213ENST00000519113 CPS1P31327 1500 aa30.37■■■□□ 2.45
CTNNA1-213ENST00000519113 PIP4K2BP78356 416 aa30.35■■■□□ 2.45
CTNNA1-213ENST00000519113 SHANK2Q9UPX8 1470 aa30.35■■■□□ 2.45
CTNNA1-213ENST00000519113 CAMSAP2Q08AD1 1489 aa30.33■■■□□ 2.45
CTNNA1-213ENST00000519113 MIA2Q96PC5 1412 aa30.33■■■□□ 2.45
CTNNA1-213ENST00000519113 TSPY4P0CV99 314 aa30.33■■■□□ 2.45
CTNNA1-213ENST00000519113 TSPY10P0CW01 314 aa30.33■■■□□ 2.45
CTNNA1-213ENST00000519113 HSPA1LP34931 641 aa30.33■■■□□ 2.45
CTNNA1-213ENST00000519113 NCOA2Q15596 1464 aa30.32■■■□□ 2.44
CTNNA1-213ENST00000519113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.32■■■□□ 2.44
CTNNA1-213ENST00000519113 NEURL4Q96JN8 1562 aa30.32■■■□□ 2.44
CTNNA1-213ENST00000519113 NLRP1Q9C000 1473 aa30.31■■■□□ 2.44
CTNNA1-213ENST00000519113 POLR1AO95602 1720 aaPredicted RBP30.3■■■□□ 2.44
CTNNA1-213ENST00000519113 UGGT1Q9NYU2 1555 aa30.25■■■□□ 2.43
CTNNA1-213ENST00000519113 NPHP4O75161 1426 aaPredicted RBP30.24■■■□□ 2.43
CTNNA1-213ENST00000519113 MED14O60244 1454 aa30.24■■■□□ 2.43
CTNNA1-213ENST00000519113 ARHGEF5Q12774 1597 aa30.23■■■□□ 2.43
CTNNA1-213ENST00000519113 VWDEQ8N2E2 1590 aa30.2■■■□□ 2.43
CTNNA1-213ENST00000519113 DEPDC5O75140 1603 aa30.19■■■□□ 2.42
CTNNA1-213ENST00000519113 MED1Q15648 1581 aaPredicted RBP30.17■■■□□ 2.42
CTNNA1-213ENST00000519113 ABCC3O15438 1527 aa30.12■■■□□ 2.41
CTNNA1-213ENST00000519113 RNF17Q9BXT8 1623 aaKnown RBP30.11■■■□□ 2.41
CTNNA1-213ENST00000519113 IQGAP1P46940 1657 aa30.09■■■□□ 2.41
CTNNA1-213ENST00000519113 PHF23Q9BUL5 403 aaPredicted RBP30.09■■■□□ 2.41
CTNNA1-213ENST00000519113 LRRC9Q6ZRR7 1453 aa30.08■■■□□ 2.41
CTNNA1-213ENST00000519113 ZC3H13Q5T200 1668 aaKnown RBP30.07■■■□□ 2.41
CTNNA1-213ENST00000519113 MAST1Q9Y2H9 1570 aa30.07■■■□□ 2.4
CTNNA1-213ENST00000519113 ERVK-7P63135 1459 aa30.07■■■□□ 2.4
CTNNA1-213ENST00000519113 LRRC7Q96NW7 1537 aa30.05■■■□□ 2.4
CTNNA1-213ENST00000519113 ALKQ9UM73 1620 aa30.04■■■□□ 2.4
CTNNA1-213ENST00000519113 EIF2AK4Q9P2K8 1649 aaKnown RBP30.04■■■□□ 2.4
CTNNA1-213ENST00000519113 VPS8Q8N3P4 1428 aa30.01■■■□□ 2.39
CTNNA1-213ENST00000519113 MYOM3Q5VTT5 1437 aa29.98■■■□□ 2.39
CTNNA1-213ENST00000519113 SCAF11Q99590 1463 aaKnown RBP29.98■■■□□ 2.39
CTNNA1-213ENST00000519113 SYNMO15061 1565 aa29.98■■■□□ 2.39
CTNNA1-213ENST00000519113 TXNDC2Q86VQ3 553 aa29.97■■■□□ 2.39
CTNNA1-213ENST00000519113 SENP3Q9H4L4 574 aaPredicted RBP29.97■■■□□ 2.39
CTNNA1-213ENST00000519113 DUOX2Q9NRD8 1548 aa29.96■■■□□ 2.39
CTNNA1-213ENST00000519113 MROH1Q8NDA8 1641 aa29.96■■■□□ 2.39
CTNNA1-213ENST00000519113 KANK4Q5T7N3 995 aaPredicted RBP29.96■■■□□ 2.39
CTNNA1-213ENST00000519113 STRCP1A6NGW2 1772 aa29.95■■■□□ 2.38
CTNNA1-213ENST00000519113 LTKP29376 864 aa29.94■■■□□ 2.38
CTNNA1-213ENST00000519113 EID1Q9Y6B2 187 aa29.94■■■□□ 2.38
CTNNA1-213ENST00000519113 MAP3K1Q13233 1512 aa29.93■■■□□ 2.38
CTNNA1-213ENST00000519113 ARHGAP31Q2M1Z3 1444 aa29.93■■■□□ 2.38
CTNNA1-213ENST00000519113 UBR1Q8IWV7 1749 aa29.92■■■□□ 2.38
CTNNA1-213ENST00000519113 ARHGAP23Q9P227 1491 aa29.91■■■□□ 2.38
CTNNA1-213ENST00000519113 SLIT1O75093 1534 aa29.9■■■□□ 2.38
CTNNA1-213ENST00000519113 KIF15Q9NS87 1388 aa29.9■■■□□ 2.38
CTNNA1-213ENST00000519113 CEP152O94986 1710 aa29.89■■■□□ 2.38
CTNNA1-213ENST00000519113 RRP7BPQ9NSQ0 103 aa29.87■■■□□ 2.37
CTNNA1-213ENST00000519113 CFAP65Q6ZU64 1925 aaKnown RBP29.86■■■□□ 2.37
CTNNA1-213ENST00000519113 ERBINQ96RT1 1412 aa29.86■■■□□ 2.37
CTNNA1-213ENST00000519113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.85■■■□□ 2.371e-7■□□□□ 8.2
CTNNA1-213ENST00000519113 STAG3Q9UJ98 1225 aa29.85■■■□□ 2.37
CTNNA1-213ENST00000519113 PRDM15P57071 1507 aaPredicted RBP29.84■■■□□ 2.37
CTNNA1-213ENST00000519113 LOC105371045A0A1W2PR82 267 aa29.83■■■□□ 2.37
CTNNA1-213ENST00000519113 KANK1Q14678 1352 aa29.82■■■□□ 2.36
CTNNA1-213ENST00000519113 TMEM2Q9UHN6 1383 aa29.82■■■□□ 2.36
CTNNA1-213ENST00000519113 ABCC5O15440 1437 aa29.81■■■□□ 2.36
CTNNA1-213ENST00000519113 FAM135BQ49AJ0 1406 aa29.76■■■□□ 2.35
CTNNA1-213ENST00000519113 APLP2Q06481 763 aa29.75■■■□□ 2.35
CTNNA1-213ENST00000519113 IDI1Q13907 227 aa29.74■■■□□ 2.35
CTNNA1-213ENST00000519113 RGS17Q9UGC6 210 aaPredicted RBP29.74■■■□□ 2.35
CTNNA1-213ENST00000519113 PIK3C2BO00750 1634 aa29.74■■■□□ 2.35
CTNNA1-213ENST00000519113 KCNA6P17658 529 aa29.73■■■□□ 2.35
CTNNA1-213ENST00000519113 DAPK1P53355 1430 aa29.72■■■□□ 2.35
CTNNA1-213ENST00000519113 TMEM94Q12767 1356 aa29.72■■■□□ 2.35
CTNNA1-213ENST00000519113 PTPN23Q9H3S7 1636 aa29.71■■■□□ 2.35
CTNNA1-213ENST00000519113 EFCAB6Q5THR3 1501 aa29.71■■■□□ 2.35
CTNNA1-213ENST00000519113 CROCC2H7BZ55 1655 aa29.69■■■□□ 2.34
CTNNA1-213ENST00000519113 ANKRD30AQ9BXX3 1397 aa29.69■■■□□ 2.34
CTNNA1-213ENST00000519113 PROSER2Q86WR7 435 aaPredicted RBP29.69■■■□□ 2.34
CTNNA1-213ENST00000519113 XIRP1Q702N8 1843 aaKnown RBP29.68■■■□□ 2.34
CTNNA1-213ENST00000519113 LMTK2Q8IWU2 1503 aa29.68■■■□□ 2.34
CTNNA1-213ENST00000519113 KDM5AP29375 1690 aaKnown RBP29.67■■■□□ 2.34
CTNNA1-213ENST00000519113 SLC26A8Q96RN1 970 aa29.67■■■□□ 2.34
CTNNA1-213ENST00000519113 CHIC2Q9UKJ5 165 aa29.66■■■□□ 2.34
CTNNA1-213ENST00000519113 FGD6Q6ZV73 1430 aa29.64■■■□□ 2.34
CTNNA1-213ENST00000519113 SLC52A1Q9NWF4 448 aa29.64■■■□□ 2.34
CTNNA1-213ENST00000519113 TET3O43151 1660 aa29.62■■■□□ 2.33
CTNNA1-213ENST00000519113 NOS1P29475 1434 aa29.62■■■□□ 2.33
CTNNA1-213ENST00000519113 BCANQ96GW7 911 aa29.61■■■□□ 2.33
CTNNA1-213ENST00000519113 RBM33Q96EV2 1170 aaKnown RBP29.59■■■□□ 2.33
CTNNA1-213ENST00000519113 NKTRP30414 1462 aaKnown RBP29.57■■■□□ 2.32
CTNNA1-213ENST00000519113 ADGRB3O60242 1522 aa29.56■■■□□ 2.32
CTNNA1-213ENST00000519113 MSH6P52701 1360 aa29.56■■■□□ 2.32
CTNNA1-213ENST00000519113 POTEAQ6S8J7 498 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms