RNA–Protein interactions for RNA: ENST00000519094.5

POLB-205, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-205ENST00000519094 FMN1Q68DA7 1419 aa16.56■□□□□ 0.24
POLB-205ENST00000519094 CDC42BPAQ5VT25 1732 aa16.56■□□□□ 0.24
POLB-205ENST00000519094 FBXO31Q5XUX0 539 aaPredicted RBP16.55■□□□□ 0.24
POLB-205ENST00000519094 THEMISQ8N1K5 641 aaPredicted RBP16.55■□□□□ 0.24
POLB-205ENST00000519094 INO80Q9ULG1 1556 aaPredicted RBP16.54■□□□□ 0.24
POLB-205ENST00000519094 SYCP2Q9BX26 1530 aa16.54■□□□□ 0.24
POLB-205ENST00000519094 FAM135BQ49AJ0 1406 aa16.53■□□□□ 0.24
POLB-205ENST00000519094 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.24
POLB-205ENST00000519094 UGGT1Q9NYU2 1555 aa16.51■□□□□ 0.23
POLB-205ENST00000519094 HNRNPMP52272 730 aaKnown RBP eCLIP16.51■□□□□ 0.23
POLB-205ENST00000519094 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
POLB-205ENST00000519094 PZPP20742 1482 aa16.49■□□□□ 0.23
POLB-205ENST00000519094 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
POLB-205ENST00000519094 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
POLB-205ENST00000519094 ADGBQ8N7X0 1667 aa16.48■□□□□ 0.23
POLB-205ENST00000519094 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
POLB-205ENST00000519094 MIA2Q96PC5 1412 aa16.47■□□□□ 0.23
POLB-205ENST00000519094 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
POLB-205ENST00000519094 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
POLB-205ENST00000519094 ROBO1Q9Y6N7 1651 aa16.43■□□□□ 0.22
POLB-205ENST00000519094 EEA1Q15075 1411 aa16.42■□□□□ 0.22
POLB-205ENST00000519094 KDM5DQ9BY66 1539 aa16.41■□□□□ 0.22
POLB-205ENST00000519094 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
POLB-205ENST00000519094 TRIM52Q96A61 297 aa16.4■□□□□ 0.22
POLB-205ENST00000519094 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
POLB-205ENST00000519094 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
POLB-205ENST00000519094 JCADQ9P266 1359 aa16.37■□□□□ 0.21
POLB-205ENST00000519094 CCDC18Q5T9S5 1454 aa16.36■□□□□ 0.21
POLB-205ENST00000519094 WASHC2CQ9Y4E1 1318 aa16.36■□□□□ 0.21
POLB-205ENST00000519094 KIF3BO15066 747 aa16.35■□□□□ 0.21
POLB-205ENST00000519094 ZNF772Q68DY9 489 aaPredicted RBP16.35■□□□□ 0.21
POLB-205ENST00000519094 PHLPP1O60346 1717 aa16.35■□□□□ 0.21
POLB-205ENST00000519094 SCAF11Q99590 1463 aaKnown RBP16.34■□□□□ 0.21
POLB-205ENST00000519094 CFDP1Q9UEE9 299 aaPredicted RBP16.33■□□□□ 0.2
POLB-205ENST00000519094 TMEM94Q12767 1356 aa16.33■□□□□ 0.2
POLB-205ENST00000519094 LRP6O75581 1613 aa16.33■□□□□ 0.2
POLB-205ENST00000519094 RTEL1-TNFRSF6BF6WH68 1400 aa16.32■□□□□ 0.2
POLB-205ENST00000519094 LRRC9Q6ZRR7 1453 aa16.32■□□□□ 0.2
POLB-205ENST00000519094 UBR1Q8IWV7 1749 aa16.31■□□□□ 0.2
POLB-205ENST00000519094 MAP3K1Q13233 1512 aa16.31■□□□□ 0.2
POLB-205ENST00000519094 CDK12Q9NYV4 1490 aaPredicted RBP16.31■□□□□ 0.2
POLB-205ENST00000519094 RXRBP28702 533 aa16.31■□□□□ 0.2
POLB-205ENST00000519094 LTKP29376 864 aa16.31■□□□□ 0.2
POLB-205ENST00000519094 CASKIN1Q8WXD9 1431 aa16.3■□□□□ 0.2
POLB-205ENST00000519094 ARHGAP23Q9P227 1491 aa16.29■□□□□ 0.2
POLB-205ENST00000519094 MBD5Q9P267 1494 aa16.29■□□□□ 0.2
POLB-205ENST00000519094 COL16A1Q07092 1604 aaPredicted RBP16.28■□□□□ 0.2
POLB-205ENST00000519094 SPATA31A6Q5VVP1 1343 aa16.27■□□□□ 0.2
POLB-205ENST00000519094 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
POLB-205ENST00000519094 MEX3CQ5U5Q3 659 aaKnown RBP16.27■□□□□ 0.2
POLB-205ENST00000519094 TXNDC2Q86VQ3 553 aa16.27■□□□□ 0.2
POLB-205ENST00000519094 SLIT1O75093 1534 aa16.27■□□□□ 0.2
POLB-205ENST00000519094 NCOA2Q15596 1464 aa16.27■□□□□ 0.19
POLB-205ENST00000519094 ZNF644Q9H582 1327 aaPredicted RBP16.26■□□□□ 0.19
POLB-205ENST00000519094 ERVK-7P63135 1459 aa16.25■□□□□ 0.19
POLB-205ENST00000519094 RBM33Q96EV2 1170 aaKnown RBP16.25■□□□□ 0.19
POLB-205ENST00000519094 SLAIN2Q9P270 581 aa16.25■□□□□ 0.19
POLB-205ENST00000519094 CCNB3Q8WWL7 1395 aa16.25■□□□□ 0.19
POLB-205ENST00000519094 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
POLB-205ENST00000519094 KCNA6P17658 529 aa16.23■□□□□ 0.19
POLB-205ENST00000519094 PROSER2Q86WR7 435 aaPredicted RBP16.23■□□□□ 0.19
POLB-205ENST00000519094 EP400Q96L91 3159 aa16.23■□□□□ 0.19
POLB-205ENST00000519094 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
POLB-205ENST00000519094 CFAP65Q6ZU64 1925 aaKnown RBP16.21■□□□□ 0.19
POLB-205ENST00000519094 ABCC3O15438 1527 aa16.21■□□□□ 0.19
POLB-205ENST00000519094 PRDM15P57071 1507 aaPredicted RBP16.21■□□□□ 0.19
POLB-205ENST00000519094 TIAM1Q13009 1591 aa16.21■□□□□ 0.18
POLB-205ENST00000519094 SHPRHQ149N8 1683 aa16.21■□□□□ 0.18
POLB-205ENST00000519094 SETBP1Q9Y6X0 1596 aa16.2■□□□□ 0.18
POLB-205ENST00000519094 MSH6P52701 1360 aa16.19■□□□□ 0.18
POLB-205ENST00000519094 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
POLB-205ENST00000519094 EID1Q9Y6B2 187 aa16.19■□□□□ 0.18
POLB-205ENST00000519094 RGS12O14924 1447 aa16.19■□□□□ 0.18
POLB-205ENST00000519094 FYCO1Q9BQS8 1478 aa16.18■□□□□ 0.18
POLB-205ENST00000519094 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
POLB-205ENST00000519094 NKTRP30414 1462 aaKnown RBP16.16■□□□□ 0.18
POLB-205ENST00000519094 TET3O43151 1660 aa16.15■□□□□ 0.18
POLB-205ENST00000519094 NWD1Q149M9 1564 aa16.15■□□□□ 0.18
POLB-205ENST00000519094 AFF2P51816 1311 aa16.15■□□□□ 0.18
POLB-205ENST00000519094 TMEM2Q9UHN6 1383 aa16.14■□□□□ 0.17
POLB-205ENST00000519094 SLC26A8Q96RN1 970 aa16.14■□□□□ 0.17
POLB-205ENST00000519094 CCDC141Q6ZP82 1450 aa16.14■□□□□ 0.17
POLB-205ENST00000519094 AHDC1Q5TGY3 1603 aaPredicted RBP16.13■□□□□ 0.17
POLB-205ENST00000519094 FOXD1Q16676 465 aa16.13■□□□□ 0.17
POLB-205ENST00000519094 CAMSAP2Q08AD1 1489 aa16.13■□□□□ 0.17
POLB-205ENST00000519094 KDM5AP29375 1690 aaKnown RBP16.12■□□□□ 0.17
POLB-205ENST00000519094 NUTM2BA6NNL0 878 aaPredicted RBP16.12■□□□□ 0.17
POLB-205ENST00000519094 NUTM2EB1AL46 878 aaPredicted RBP16.12■□□□□ 0.17
POLB-205ENST00000519094 NUTM2DQ5VT03 806 aaPredicted RBP16.12■□□□□ 0.17
POLB-205ENST00000519094 NUTM2AQ8IVF1 878 aaPredicted RBP16.12■□□□□ 0.17
POLB-205ENST00000519094 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
POLB-205ENST00000519094 CEP152O94986 1710 aa16.11■□□□□ 0.17
POLB-205ENST00000519094 DIP2AQ14689 1571 aa16.1■□□□□ 0.17
POLB-205ENST00000519094 PIK3C2BO00750 1634 aa16.1■□□□□ 0.17
POLB-205ENST00000519094 MROH1Q8NDA8 1641 aa16.1■□□□□ 0.17
POLB-205ENST00000519094 QTRT2Q9H974 415 aaKnown RBP16.09■□□□□ 0.17
POLB-205ENST00000519094 ATAD2Q6PL18 1390 aa16.09■□□□□ 0.17
POLB-205ENST00000519094 MTUS2Q5JR59 1369 aa16.08■□□□□ 0.16
POLB-205ENST00000519094 RSPH4AQ5TD94 716 aa16.07■□□□□ 0.16
POLB-205ENST00000519094 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms