RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 KANK1Q14678 1352 aa14.09□□□□□ -0.15
CLN8-203ENST00000518780 RAB3GAP2Q9H2M9 1393 aa14.09□□□□□ -0.15
CLN8-203ENST00000518780 BCORL1Q5H9F3 1711 aa14.07□□□□□ -0.16
CLN8-203ENST00000518780 GGT6Q6P531 493 aa14.07□□□□□ -0.16
CLN8-203ENST00000518780 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
CLN8-203ENST00000518780 FAM135AQ9P2D6 1515 aa14.06□□□□□ -0.16
CLN8-203ENST00000518780 ESF1Q9H501 851 aaKnown RBP14.05□□□□□ -0.16
CLN8-203ENST00000518780 NUP155O75694 1391 aa14.05□□□□□ -0.16
CLN8-203ENST00000518780 TRIM52Q96A61 297 aa14.04□□□□□ -0.16
CLN8-203ENST00000518780 WASHC2CQ9Y4E1 1318 aa14.04□□□□□ -0.16
CLN8-203ENST00000518780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.03□□□□□ -0.16
CLN8-203ENST00000518780 CNTLNQ9NXG0 1405 aa14.03□□□□□ -0.16
CLN8-203ENST00000518780 RNF17Q9BXT8 1623 aaKnown RBP14.03□□□□□ -0.16
CLN8-203ENST00000518780 KDM5DQ9BY66 1539 aa14.02□□□□□ -0.16
CLN8-203ENST00000518780 PRDM15P57071 1507 aaPredicted RBP14.01□□□□□ -0.17
CLN8-203ENST00000518780 MLECQ14165 292 aa14.01□□□□□ -0.17
CLN8-203ENST00000518780 DEPDC5O75140 1603 aa14.01□□□□□ -0.17
CLN8-203ENST00000518780 UNC13BO14795 1591 aa14□□□□□ -0.17
CLN8-203ENST00000518780 LMTK2Q8IWU2 1503 aa14□□□□□ -0.17
CLN8-203ENST00000518780 SLC4A1APQ9BWU0 796 aaKnown RBP13.99□□□□□ -0.17
CLN8-203ENST00000518780 VWDEQ8N2E2 1590 aa13.99□□□□□ -0.17
CLN8-203ENST00000518780 MPHOSPH9Q99550 1183 aa13.98□□□□□ -0.17
CLN8-203ENST00000518780 ARHGAP31Q2M1Z3 1444 aa13.98□□□□□ -0.17
CLN8-203ENST00000518780 MROH1Q8NDA8 1641 aa13.97□□□□□ -0.17
CLN8-203ENST00000518780 ZMYM3Q14202 1370 aa13.96□□□□□ -0.18
CLN8-203ENST00000518780 SIGLEC1Q9BZZ2 1709 aa13.95□□□□□ -0.18
CLN8-203ENST00000518780 ABCC3O15438 1527 aa13.95□□□□□ -0.18
CLN8-203ENST00000518780 PZPP20742 1482 aa13.94□□□□□ -0.18
CLN8-203ENST00000518780 RPRD2Q5VT52 1461 aaKnown RBP13.94□□□□□ -0.18
CLN8-203ENST00000518780 IQGAP3Q86VI3 1631 aa13.94□□□□□ -0.18
CLN8-203ENST00000518780 PKD2Q13563 968 aa13.94□□□□□ -0.18
CLN8-203ENST00000518780 ZC3H13Q5T200 1668 aaKnown RBP13.94□□□□□ -0.18
CLN8-203ENST00000518780 FOXD1Q16676 465 aa13.92□□□□□ -0.18
CLN8-203ENST00000518780 ADAMTSL3P82987 1691 aa13.91□□□□□ -0.18
CLN8-203ENST00000518780 EFCAB6Q5THR3 1501 aa13.9□□□□□ -0.19
CLN8-203ENST00000518780 NPATQ14207 1427 aa13.9□□□□□ -0.19
CLN8-203ENST00000518780 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.19
CLN8-203ENST00000518780 TET3O43151 1660 aa13.89□□□□□ -0.19
CLN8-203ENST00000518780 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
CLN8-203ENST00000518780 KDM4FA0A1W2PPD8 638 aa13.89□□□□□ -0.19
CLN8-203ENST00000518780 MROH2AA6NES4 1674 aa13.88□□□□□ -0.19
CLN8-203ENST00000518780 SLC52A1Q9NWF4 448 aa13.88□□□□□ -0.19
CLN8-203ENST00000518780 PTPRTO14522 1441 aa13.88□□□□□ -0.19
CLN8-203ENST00000518780 PTPRMP28827 1452 aa13.87□□□□□ -0.19
CLN8-203ENST00000518780 NOS1P29475 1434 aa13.86□□□□□ -0.19
CLN8-203ENST00000518780 CAMSAP1Q5T5Y3 1602 aa13.86□□□□□ -0.19
CLN8-203ENST00000518780 MADDQ8WXG6 1647 aa13.86□□□□□ -0.19
CLN8-203ENST00000518780 CLTCQ00610 1675 aaKnown RBP13.85□□□□□ -0.19
CLN8-203ENST00000518780 ANKRD30BQ9BXX2 1392 aa13.84□□□□□ -0.19
CLN8-203ENST00000518780 FER1L4A9Z1Z3 1794 aa13.84□□□□□ -0.19
CLN8-203ENST00000518780 CEBPAP49715 358 aaPredicted RBP13.84□□□□□ -0.19
CLN8-203ENST00000518780 FBXO31Q5XUX0 539 aaPredicted RBP13.84□□□□□ -0.19
CLN8-203ENST00000518780 ERVK-7P63135 1459 aa13.84□□□□□ -0.19
CLN8-203ENST00000518780 TNRQ92752 1358 aa13.83□□□□□ -0.2
CLN8-203ENST00000518780 CEP152O94986 1710 aa13.82□□□□□ -0.2
CLN8-203ENST00000518780 CCER1Q8TC90 406 aaPredicted RBP13.82□□□□□ -0.2
CLN8-203ENST00000518780 SPATA31D1Q6ZQQ2 1576 aa13.82□□□□□ -0.2
CLN8-203ENST00000518780 E9PCH4 1651 aa13.81□□□□□ -0.2
CLN8-203ENST00000518780 CCDC144AA2RUR9 1427 aa13.81□□□□□ -0.2
CLN8-203ENST00000518780 PLA2R1Q13018 1463 aa13.8□□□□□ -0.2
CLN8-203ENST00000518780 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
CLN8-203ENST00000518780 RIMS1Q86UR5 1692 aaKnown RBP13.8□□□□□ -0.2
CLN8-203ENST00000518780 TRPM2O94759 1503 aa13.8□□□□□ -0.2
CLN8-203ENST00000518780 IDI1Q13907 227 aa13.79□□□□□ -0.2
CLN8-203ENST00000518780 C3P01024 1663 aa13.78□□□□□ -0.2
CLN8-203ENST00000518780 TIMELESSQ9UNS1 1208 aa13.77□□□□□ -0.21
CLN8-203ENST00000518780 STAC3Q96MF2 364 aa13.76□□□□□ -0.21
CLN8-203ENST00000518780 PREX1Q8TCU6 1659 aa13.75□□□□□ -0.21
CLN8-203ENST00000518780 HDGFP51858 240 aaKnown RBP13.75□□□□□ -0.21
CLN8-203ENST00000518780 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
CLN8-203ENST00000518780 THEMISQ8N1K5 641 aaPredicted RBP13.75□□□□□ -0.21
CLN8-203ENST00000518780 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
CLN8-203ENST00000518780 UHRF1BP1Q6BDS2 1440 aa13.74□□□□□ -0.21
CLN8-203ENST00000518780 RPGRIP1LQ68CZ1 1315 aa13.74□□□□□ -0.21
CLN8-203ENST00000518780 SETD1BQ9UPS6 1966 aaKnown RBP13.74□□□□□ -0.21
CLN8-203ENST00000518780 SYNMO15061 1565 aa13.74□□□□□ -0.21
CLN8-203ENST00000518780 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
CLN8-203ENST00000518780 SPHKAPQ2M3C7 1700 aa13.73□□□□□ -0.21
CLN8-203ENST00000518780 NEURL4Q96JN8 1562 aa13.73□□□□□ -0.21
CLN8-203ENST00000518780 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
CLN8-203ENST00000518780 CHGAP10645 457 aaKnown RBP13.7□□□□□ -0.22
CLN8-203ENST00000518780 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLN8-203ENST00000518780 SIN3AQ96ST3 1273 aa13.7□□□□□ -0.22
CLN8-203ENST00000518780 SPATA31E1Q6ZUB1 1445 aa13.7□□□□□ -0.22
CLN8-203ENST00000518780 NEUROD1Q13562 356 aa13.69□□□□□ -0.22
CLN8-203ENST00000518780 KDM5AP29375 1690 aaKnown RBP13.69□□□□□ -0.22
CLN8-203ENST00000518780 CLTCL1P53675 1640 aa13.68□□□□□ -0.22
CLN8-203ENST00000518780 UGGT1Q9NYU2 1555 aa13.68□□□□□ -0.22
CLN8-203ENST00000518780 ZNF326Q5BKZ1 582 aaKnown RBP13.68□□□□□ -0.22
CLN8-203ENST00000518780 VGFO15240 615 aaPredicted RBP13.67□□□□□ -0.22
CLN8-203ENST00000518780 EID1Q9Y6B2 187 aa13.67□□□□□ -0.22
CLN8-203ENST00000518780 ADGRB3O60242 1522 aa13.67□□□□□ -0.22
CLN8-203ENST00000518780 TMEM2Q9UHN6 1383 aa13.67□□□□□ -0.22
CLN8-203ENST00000518780 CEP170BQ9Y4F5 1589 aaPredicted RBP13.66□□□□□ -0.22
CLN8-203ENST00000518780 MYO3AQ8NEV4 1616 aa13.66□□□□□ -0.22
CLN8-203ENST00000518780 RGL3Q3MIN7 710 aa13.66□□□□□ -0.22
CLN8-203ENST00000518780 TONSLQ96HA7 1378 aa13.66□□□□□ -0.22
CLN8-203ENST00000518780 ANKLE2Q86XL3 938 aa13.65□□□□□ -0.22
CLN8-203ENST00000518780 ZFYVE9O95405 1425 aa13.64□□□□□ -0.23
CLN8-203ENST00000518780 TMEM131LA2VDJ0 1609 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms