RNA–Protein interactions for RNA: ENST00000518321.5

TVP23C-205, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-205ENST00000518321 NCKAP5LQ9HCH0 1330 aa22.14■■□□□ 1.14
TVP23C-205ENST00000518321 LTBP4Q8N2S1 1624 aa22.13■■□□□ 1.13
TVP23C-205ENST00000518321 MAP3K1Q13233 1512 aa22.13■■□□□ 1.13
TVP23C-205ENST00000518321 FAM135AQ9P2D6 1515 aa22.13■■□□□ 1.13
TVP23C-205ENST00000518321 PKD2Q13563 968 aa22.13■■□□□ 1.13
TVP23C-205ENST00000518321 KDM5DQ9BY66 1539 aa22.11■■□□□ 1.13
TVP23C-205ENST00000518321 WASHC2CQ9Y4E1 1318 aa22.1■■□□□ 1.13
TVP23C-205ENST00000518321 A2ML1A8K2U0 1454 aa22.09■■□□□ 1.13
TVP23C-205ENST00000518321 IQSEC2Q5JU85 1478 aa22.09■■□□□ 1.13
TVP23C-205ENST00000518321 KANK4Q5T7N3 995 aaPredicted RBP22.09■■□□□ 1.13
TVP23C-205ENST00000518321 TCOF1Q13428 1488 aaKnown RBP22.09■■□□□ 1.13
TVP23C-205ENST00000518321 PZPP20742 1482 aa22.08■■□□□ 1.12
TVP23C-205ENST00000518321 TNRQ92752 1358 aa22.07■■□□□ 1.12
TVP23C-205ENST00000518321 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
TVP23C-205ENST00000518321 FBXO31Q5XUX0 539 aaPredicted RBP22.06■■□□□ 1.12
TVP23C-205ENST00000518321 MAST1Q9Y2H9 1570 aa22.06■■□□□ 1.12
TVP23C-205ENST00000518321 DNMT1P26358 1616 aaKnown RBP22.06■■□□□ 1.12
TVP23C-205ENST00000518321 MYOM3Q5VTT5 1437 aa22.06■■□□□ 1.12
TVP23C-205ENST00000518321 ZNF335Q9H4Z2 1342 aaPredicted RBP22.04■■□□□ 1.12
TVP23C-205ENST00000518321 RNF17Q9BXT8 1623 aaKnown RBP22■■□□□ 1.11
TVP23C-205ENST00000518321 APLP2Q06481 763 aa22■■□□□ 1.11
TVP23C-205ENST00000518321 EIF2AK4Q9P2K8 1649 aaKnown RBP21.98■■□□□ 1.11
TVP23C-205ENST00000518321 NLRP1Q9C000 1473 aa21.98■■□□□ 1.11
TVP23C-205ENST00000518321 ZC3H13Q5T200 1668 aaKnown RBP21.97■■□□□ 1.11
TVP23C-205ENST00000518321 POLR1AO95602 1720 aaPredicted RBP21.97■■□□□ 1.11
TVP23C-205ENST00000518321 THEMISQ8N1K5 641 aaPredicted RBP21.96■■□□□ 1.11
TVP23C-205ENST00000518321 ABCC3O15438 1527 aa21.96■■□□□ 1.11
TVP23C-205ENST00000518321 ANKLE2Q86XL3 938 aa21.94■■□□□ 1.1
TVP23C-205ENST00000518321 DUOX2Q9NRD8 1548 aa21.94■■□□□ 1.1
TVP23C-205ENST00000518321 UGGT1Q9NYU2 1555 aa21.94■■□□□ 1.1
TVP23C-205ENST00000518321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.93■■□□□ 1.1
TVP23C-205ENST00000518321 NEURL4Q96JN8 1562 aa21.92■■□□□ 1.1
TVP23C-205ENST00000518321 UBAP1LF5GYI3 381 aa21.92■■□□□ 1.1
TVP23C-205ENST00000518321 MROH1Q8NDA8 1641 aa21.91■■□□□ 1.1
TVP23C-205ENST00000518321 PTPN23Q9H3S7 1636 aa21.91■■□□□ 1.1
TVP23C-205ENST00000518321 SPATA31D1Q6ZQQ2 1576 aa21.91■■□□□ 1.1
TVP23C-205ENST00000518321 SHANK2Q9UPX8 1470 aa21.9■■□□□ 1.1
TVP23C-205ENST00000518321 DISP3Q9P2K9 1392 aa21.9■■□□□ 1.1
TVP23C-205ENST00000518321 KIF15Q9NS87 1388 aa21.89■■□□□ 1.1
TVP23C-205ENST00000518321 ABCC5O15440 1437 aa21.89■■□□□ 1.09
TVP23C-205ENST00000518321 CROCC2H7BZ55 1655 aa21.88■■□□□ 1.09
TVP23C-205ENST00000518321 ERVK-7P63135 1459 aa21.88■■□□□ 1.09
TVP23C-205ENST00000518321 CEP152O94986 1710 aa21.87■■□□□ 1.09
TVP23C-205ENST00000518321 ERBINQ96RT1 1412 aa21.87■■□□□ 1.09
TVP23C-205ENST00000518321 DEPDC5O75140 1603 aa21.87■■□□□ 1.09
TVP23C-205ENST00000518321 CPS1P31327 1500 aa21.86■■□□□ 1.09
TVP23C-205ENST00000518321 RRP7BPQ9NSQ0 103 aa21.86■■□□□ 1.09
TVP23C-205ENST00000518321 MED14O60244 1454 aa21.85■■□□□ 1.09
TVP23C-205ENST00000518321 NPHP4O75161 1426 aaPredicted RBP21.85■■□□□ 1.09
TVP23C-205ENST00000518321 DAPK1P53355 1430 aa21.85■■□□□ 1.09
TVP23C-205ENST00000518321 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
TVP23C-205ENST00000518321 PRDM15P57071 1507 aaPredicted RBP21.83■■□□□ 1.09
TVP23C-205ENST00000518321 CFAP65Q6ZU64 1925 aaKnown RBP21.82■■□□□ 1.08
TVP23C-205ENST00000518321 ARHGAP31Q2M1Z3 1444 aa21.81■■□□□ 1.08
TVP23C-205ENST00000518321 IQGAP1P46940 1657 aa21.8■■□□□ 1.08
TVP23C-205ENST00000518321 VWDEQ8N2E2 1590 aa21.8■■□□□ 1.08
TVP23C-205ENST00000518321 ANKRD30AQ9BXX3 1397 aa21.79■■□□□ 1.08
TVP23C-205ENST00000518321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.79■■□□□ 1.081e-7■□□□□ 8.3
TVP23C-205ENST00000518321 KANK1Q14678 1352 aa21.78■■□□□ 1.08
TVP23C-205ENST00000518321 TOM1O60784 492 aa21.78■■□□□ 1.08
TVP23C-205ENST00000518321 UBR1Q8IWV7 1749 aa21.77■■□□□ 1.08
TVP23C-205ENST00000518321 CHIC2Q9UKJ5 165 aa21.77■■□□□ 1.08
TVP23C-205ENST00000518321 ILDR2Q71H61 639 aa21.75■■□□□ 1.07
TVP23C-205ENST00000518321 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
TVP23C-205ENST00000518321 PIP4K2BP78356 416 aa21.73■■□□□ 1.07
TVP23C-205ENST00000518321 SCAF11Q99590 1463 aaKnown RBP21.72■■□□□ 1.07
TVP23C-205ENST00000518321 ARHGAP23Q9P227 1491 aa21.71■■□□□ 1.07
TVP23C-205ENST00000518321 SLIT1O75093 1534 aa21.7■■□□□ 1.07
TVP23C-205ENST00000518321 TXNDC2Q86VQ3 553 aa21.7■■□□□ 1.06
TVP23C-205ENST00000518321 LMTK2Q8IWU2 1503 aa21.7■■□□□ 1.06
TVP23C-205ENST00000518321 FAM50AQ14320 339 aaKnown RBP21.69■■□□□ 1.06
TVP23C-205ENST00000518321 EID1Q9Y6B2 187 aa21.69■■□□□ 1.06
TVP23C-205ENST00000518321 ADGRL2O95490 1459 aa21.69■■□□□ 1.06
TVP23C-205ENST00000518321 LTKP29376 864 aa21.68■■□□□ 1.06
TVP23C-205ENST00000518321 STAG3Q9UJ98 1225 aa21.68■■□□□ 1.06
TVP23C-205ENST00000518321 PIK3C2BO00750 1634 aa21.67■■□□□ 1.06
TVP23C-205ENST00000518321 HSPA1LP34931 641 aa21.67■■□□□ 1.06
TVP23C-205ENST00000518321 STRCP1A6NGW2 1772 aa21.66■■□□□ 1.06
TVP23C-205ENST00000518321 SYNMO15061 1565 aa21.66■■□□□ 1.06
TVP23C-205ENST00000518321 LRRC7Q96NW7 1537 aa21.65■■□□□ 1.06
TVP23C-205ENST00000518321 SOCS7O14512 581 aa21.65■■□□□ 1.06
TVP23C-205ENST00000518321 TMEM2Q9UHN6 1383 aa21.64■■□□□ 1.06
TVP23C-205ENST00000518321 KDM5AP29375 1690 aaKnown RBP21.63■■□□□ 1.05
TVP23C-205ENST00000518321 IDI1Q13907 227 aa21.63■■□□□ 1.05
TVP23C-205ENST00000518321 EFCAB6Q5THR3 1501 aa21.63■■□□□ 1.05
TVP23C-205ENST00000518321 ANKRD50Q9ULJ7 1429 aa21.62■■□□□ 1.05
TVP23C-205ENST00000518321 ALKQ9UM73 1620 aa21.61■■□□□ 1.05
TVP23C-205ENST00000518321 NOS1P29475 1434 aa21.61■■□□□ 1.05
TVP23C-205ENST00000518321 SLC52A1Q9NWF4 448 aa21.58■■□□□ 1.05
TVP23C-205ENST00000518321 RPRD2Q5VT52 1461 aaKnown RBP21.57■■□□□ 1.04
TVP23C-205ENST00000518321 ADGRB3O60242 1522 aa21.55■■□□□ 1.04
TVP23C-205ENST00000518321 MED1Q15648 1581 aaPredicted RBP21.53■■□□□ 1.04
TVP23C-205ENST00000518321 TET3O43151 1660 aa21.53■■□□□ 1.04
TVP23C-205ENST00000518321 KCNA6P17658 529 aa21.5■■□□□ 1.03
TVP23C-205ENST00000518321 SLC26A8Q96RN1 970 aa21.5■■□□□ 1.03
TVP23C-205ENST00000518321 XIRP1Q702N8 1843 aaKnown RBP21.5■■□□□ 1.03
TVP23C-205ENST00000518321 ROCK1Q13464 1354 aa21.49■■□□□ 1.03
TVP23C-205ENST00000518321 UNC13BO14795 1591 aa21.49■■□□□ 1.03
TVP23C-205ENST00000518321 GCC2Q8IWJ2 1684 aa21.48■■□□□ 1.03
TVP23C-205ENST00000518321 BCANQ96GW7 911 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms