RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 GGT6Q6P531 493 aa19.17■□□□□ 0.66
MRPS28-202ENST00000518271 DAPK1P53355 1430 aa19.17■□□□□ 0.66
MRPS28-202ENST00000518271 ESF1Q9H501 851 aaKnown RBP19.16■□□□□ 0.66
MRPS28-202ENST00000518271 TSPY4P0CV99 314 aa19.15■□□□□ 0.66
MRPS28-202ENST00000518271 TSPY10P0CW01 314 aa19.15■□□□□ 0.66
MRPS28-202ENST00000518271 DUOX2Q9NRD8 1548 aa19.15■□□□□ 0.66
MRPS28-202ENST00000518271 ZC3H13Q5T200 1668 aaKnown RBP19.14■□□□□ 0.66
MRPS28-202ENST00000518271 CEP152O94986 1710 aa19.14■□□□□ 0.65
MRPS28-202ENST00000518271 KIF3BO15066 747 aa19.13■□□□□ 0.65
MRPS28-202ENST00000518271 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
MRPS28-202ENST00000518271 DEPDC5O75140 1603 aa19.12■□□□□ 0.65
MRPS28-202ENST00000518271 CEP170BQ9Y4F5 1589 aaPredicted RBP19.11■□□□□ 0.65
MRPS28-202ENST00000518271 ABCC3O15438 1527 aa19.11■□□□□ 0.65
MRPS28-202ENST00000518271 PZPP20742 1482 aa19.1■□□□□ 0.65
MRPS28-202ENST00000518271 PRDM15P57071 1507 aaPredicted RBP19.1■□□□□ 0.65
MRPS28-202ENST00000518271 KIF15Q9NS87 1388 aa19.09■□□□□ 0.65
MRPS28-202ENST00000518271 CAMSAP1Q5T5Y3 1602 aa19.08■□□□□ 0.65
MRPS28-202ENST00000518271 ADGRL2O95490 1459 aa19.08■□□□□ 0.64
MRPS28-202ENST00000518271 NCOA1Q15788 1441 aa19.08■□□□□ 0.64
MRPS28-202ENST00000518271 ERBINQ96RT1 1412 aa19.07■□□□□ 0.64
MRPS28-202ENST00000518271 CFAP65Q6ZU64 1925 aaKnown RBP19.03■□□□□ 0.64
MRPS28-202ENST00000518271 A2ML1A8K2U0 1454 aa19.03■□□□□ 0.64
MRPS28-202ENST00000518271 SPATA31D1Q6ZQQ2 1576 aa19.02■□□□□ 0.64
MRPS28-202ENST00000518271 VWDEQ8N2E2 1590 aa19.02■□□□□ 0.63
MRPS28-202ENST00000518271 FBXO31Q5XUX0 539 aaPredicted RBP19.01■□□□□ 0.63
MRPS28-202ENST00000518271 PLA2R1Q13018 1463 aa19.01■□□□□ 0.63
MRPS28-202ENST00000518271 WASHC2CQ9Y4E1 1318 aa19■□□□□ 0.63
MRPS28-202ENST00000518271 ILDR1Q86SU0 546 aaPredicted RBP19■□□□□ 0.63
MRPS28-202ENST00000518271 RRP7BPQ9NSQ0 103 aa19■□□□□ 0.63
MRPS28-202ENST00000518271 TNRQ92752 1358 aa19■□□□□ 0.63
MRPS28-202ENST00000518271 POLR1AO95602 1720 aaPredicted RBP19■□□□□ 0.63
MRPS28-202ENST00000518271 PTPRTO14522 1441 aa19■□□□□ 0.63
MRPS28-202ENST00000518271 ANKRD30AQ9BXX3 1397 aa18.99■□□□□ 0.63
MRPS28-202ENST00000518271 ERVK-7P63135 1459 aa18.98■□□□□ 0.63
MRPS28-202ENST00000518271 CHIC2Q9UKJ5 165 aa18.97■□□□□ 0.63
MRPS28-202ENST00000518271 LMTK2Q8IWU2 1503 aa18.96■□□□□ 0.63
MRPS28-202ENST00000518271 FAM50AQ14320 339 aaKnown RBP18.96■□□□□ 0.63
MRPS28-202ENST00000518271 NEURL4Q96JN8 1562 aa18.96■□□□□ 0.63
MRPS28-202ENST00000518271 NLRP1Q9C000 1473 aa18.95■□□□□ 0.62
MRPS28-202ENST00000518271 ARHGAP31Q2M1Z3 1444 aa18.94■□□□□ 0.62
MRPS28-202ENST00000518271 LTBP4Q8N2S1 1624 aa18.93■□□□□ 0.62
MRPS28-202ENST00000518271 PPARGC1BQ86YN6 1023 aaKnown RBP18.93■□□□□ 0.62
MRPS28-202ENST00000518271 UBR1Q8IWV7 1749 aa18.93■□□□□ 0.62
MRPS28-202ENST00000518271 UNC13BO14795 1591 aa18.93■□□□□ 0.62
MRPS28-202ENST00000518271 EFCAB6Q5THR3 1501 aa18.92■□□□□ 0.62
MRPS28-202ENST00000518271 UGGT1Q9NYU2 1555 aa18.9■□□□□ 0.62
MRPS28-202ENST00000518271 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
MRPS28-202ENST00000518271 NCKAP5LQ9HCH0 1330 aa18.9■□□□□ 0.62
MRPS28-202ENST00000518271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.9■□□□□ 0.62
MRPS28-202ENST00000518271 ANKRD50Q9ULJ7 1429 aa18.9■□□□□ 0.62
MRPS28-202ENST00000518271 SYNMO15061 1565 aa18.89■□□□□ 0.61
MRPS28-202ENST00000518271 ROCK1Q13464 1354 aa18.88■□□□□ 0.61
MRPS28-202ENST00000518271 PIK3C2BO00750 1634 aa18.87■□□□□ 0.61
MRPS28-202ENST00000518271 TET3O43151 1660 aa18.87■□□□□ 0.61
MRPS28-202ENST00000518271 RRBP1Q9P2E9 1410 aaKnown RBP18.87■□□□□ 0.61
MRPS28-202ENST00000518271 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
MRPS28-202ENST00000518271 FBXO41Q8TF61 875 aa18.86■□□□□ 0.61
MRPS28-202ENST00000518271 PKD2Q13563 968 aa18.85■□□□□ 0.61
MRPS28-202ENST00000518271 CERKQ8TCT0 537 aa18.85■□□□□ 0.61
MRPS28-202ENST00000518271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.611e-8■■■□□ 15.2
MRPS28-202ENST00000518271 KANK1Q14678 1352 aa18.84■□□□□ 0.61
MRPS28-202ENST00000518271 IQGAP3Q86VI3 1631 aa18.84■□□□□ 0.61
MRPS28-202ENST00000518271 KDM5AP29375 1690 aaKnown RBP18.83■□□□□ 0.61
MRPS28-202ENST00000518271 MED14O60244 1454 aa18.82■□□□□ 0.6
MRPS28-202ENST00000518271 IQGAP1P46940 1657 aa18.82■□□□□ 0.6
MRPS28-202ENST00000518271 NOS1P29475 1434 aa18.82■□□□□ 0.6
MRPS28-202ENST00000518271 E9PCH4 1651 aa18.81■□□□□ 0.6
MRPS28-202ENST00000518271 ARHGAP23Q9P227 1491 aa18.8■□□□□ 0.6
MRPS28-202ENST00000518271 SLIT1O75093 1534 aa18.79■□□□□ 0.6
MRPS28-202ENST00000518271 MYO5BQ9ULV0 1848 aa18.79■□□□□ 0.6
MRPS28-202ENST00000518271 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
MRPS28-202ENST00000518271 RPRD2Q5VT52 1461 aaKnown RBP18.77■□□□□ 0.6
MRPS28-202ENST00000518271 STRCP1A6NGW2 1772 aa18.77■□□□□ 0.6
MRPS28-202ENST00000518271 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.59
MRPS28-202ENST00000518271 ADGRB3O60242 1522 aa18.76■□□□□ 0.59
MRPS28-202ENST00000518271 THEMISQ8N1K5 641 aaPredicted RBP18.76■□□□□ 0.59
MRPS28-202ENST00000518271 NPHP4O75161 1426 aaPredicted RBP18.75■□□□□ 0.59
MRPS28-202ENST00000518271 ITGAEP38570 1179 aa18.75■□□□□ 0.59
MRPS28-202ENST00000518271 SCAF11Q99590 1463 aaKnown RBP18.73■□□□□ 0.59
MRPS28-202ENST00000518271 ANKLE2Q86XL3 938 aa18.72■□□□□ 0.59
MRPS28-202ENST00000518271 NAIPQ13075 1403 aa18.71■□□□□ 0.59
MRPS28-202ENST00000518271 TMEM131LA2VDJ0 1609 aa18.71■□□□□ 0.58
MRPS28-202ENST00000518271 IDI1Q13907 227 aa18.69■□□□□ 0.58
MRPS28-202ENST00000518271 SPHKAPQ2M3C7 1700 aa18.69■□□□□ 0.58
MRPS28-202ENST00000518271 TMEM2Q9UHN6 1383 aa18.68■□□□□ 0.58
MRPS28-202ENST00000518271 LTKP29376 864 aa18.68■□□□□ 0.58
MRPS28-202ENST00000518271 CPS1P31327 1500 aa18.68■□□□□ 0.58
MRPS28-202ENST00000518271 NUP155O75694 1391 aa18.65■□□□□ 0.58
MRPS28-202ENST00000518271 HFM1A2PYH4 1435 aa18.65■□□□□ 0.58
MRPS28-202ENST00000518271 XIRP1Q702N8 1843 aaKnown RBP18.64■□□□□ 0.57
MRPS28-202ENST00000518271 ZFYVE9O95405 1425 aa18.63■□□□□ 0.57
MRPS28-202ENST00000518271 ALKQ9UM73 1620 aa18.63■□□□□ 0.57
MRPS28-202ENST00000518271 SLC52A1Q9NWF4 448 aa18.62■□□□□ 0.57
MRPS28-202ENST00000518271 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
MRPS28-202ENST00000518271 LRRC7Q96NW7 1537 aa18.59■□□□□ 0.57
MRPS28-202ENST00000518271 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
MRPS28-202ENST00000518271 NWD1Q149M9 1564 aa18.56■□□□□ 0.56
MRPS28-202ENST00000518271 TRPM2O94759 1503 aa18.56■□□□□ 0.56
MRPS28-202ENST00000518271 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
MRPS28-202ENST00000518271 RIMS2Q9UQ26 1411 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms