RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 ABCC5O15440 1437 aa16.4■□□□□ 0.22
SPIDR-205ENST00000518060 DAPK1P53355 1430 aa16.39■□□□□ 0.21
SPIDR-205ENST00000518060 NCOA1Q15788 1441 aa16.39■□□□□ 0.21
SPIDR-205ENST00000518060 CAMSAP1Q5T5Y3 1602 aa16.39■□□□□ 0.21
SPIDR-205ENST00000518060 FAM50AQ14320 339 aaKnown RBP16.39■□□□□ 0.21
SPIDR-205ENST00000518060 RRP7BPQ9NSQ0 103 aa16.39■□□□□ 0.21
SPIDR-205ENST00000518060 SHANK2Q9UPX8 1470 aa16.39■□□□□ 0.21
SPIDR-205ENST00000518060 TNRQ92752 1358 aa16.38■□□□□ 0.21
SPIDR-205ENST00000518060 FBXO31Q5XUX0 539 aaPredicted RBP16.38■□□□□ 0.21
SPIDR-205ENST00000518060 CHIC2Q9UKJ5 165 aa16.38■□□□□ 0.21
SPIDR-205ENST00000518060 DUOX2Q9NRD8 1548 aa16.38■□□□□ 0.21
SPIDR-205ENST00000518060 FAM135AQ9P2D6 1515 aa16.38■□□□□ 0.21
SPIDR-205ENST00000518060 STRCQ7RTU9 1775 aa16.38■□□□□ 0.21
SPIDR-205ENST00000518060 CEP170BQ9Y4F5 1589 aaPredicted RBP16.38■□□□□ 0.21
SPIDR-205ENST00000518060 PZPP20742 1482 aa16.37■□□□□ 0.21
SPIDR-205ENST00000518060 TCOF1Q13428 1488 aaKnown RBP16.36■□□□□ 0.21
SPIDR-205ENST00000518060 CERKQ8TCT0 537 aa16.36■□□□□ 0.21
SPIDR-205ENST00000518060 NCKAP5LQ9HCH0 1330 aa16.36■□□□□ 0.21
SPIDR-205ENST00000518060 CROCC2H7BZ55 1655 aa16.36■□□□□ 0.21
SPIDR-205ENST00000518060 DNMT1P26358 1616 aaKnown RBP16.35■□□□□ 0.21
SPIDR-205ENST00000518060 RNF17Q9BXT8 1623 aaKnown RBP16.35■□□□□ 0.21
SPIDR-205ENST00000518060 EIF2AK4Q9P2K8 1649 aaKnown RBP16.35■□□□□ 0.21
SPIDR-205ENST00000518060 ZNF142P52746 1687 aaPredicted RBP16.35■□□□□ 0.21
SPIDR-205ENST00000518060 PTPRTO14522 1441 aa16.35■□□□□ 0.21
SPIDR-205ENST00000518060 ABCC3O15438 1527 aa16.35■□□□□ 0.21
SPIDR-205ENST00000518060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPIDR-205ENST00000518060 ANKRD30AQ9BXX3 1397 aa16.34■□□□□ 0.21
SPIDR-205ENST00000518060 A2ML1A8K2U0 1454 aa16.34■□□□□ 0.21
SPIDR-205ENST00000518060 ERBINQ96RT1 1412 aa16.33■□□□□ 0.2
SPIDR-205ENST00000518060 PPARGC1BQ86YN6 1023 aaKnown RBP16.32■□□□□ 0.2
SPIDR-205ENST00000518060 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
SPIDR-205ENST00000518060 PLA2R1Q13018 1463 aa16.3■□□□□ 0.2
SPIDR-205ENST00000518060 PKD2Q13563 968 aa16.3■□□□□ 0.2
SPIDR-205ENST00000518060 KANK1Q14678 1352 aa16.29■□□□□ 0.2
SPIDR-205ENST00000518060 MROH1Q8NDA8 1641 aa16.29■□□□□ 0.2
SPIDR-205ENST00000518060 NLRP1Q9C000 1473 aa16.28■□□□□ 0.2
SPIDR-205ENST00000518060 CEP152O94986 1710 aa16.27■□□□□ 0.19
SPIDR-205ENST00000518060 ERVK-7P63135 1459 aa16.27■□□□□ 0.19
SPIDR-205ENST00000518060 PRDM15P57071 1507 aaPredicted RBP16.26■□□□□ 0.19
SPIDR-205ENST00000518060 UGGT1Q9NYU2 1555 aa16.25■□□□□ 0.19
SPIDR-205ENST00000518060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.25■□□□□ 0.19
SPIDR-205ENST00000518060 ZNF335Q9H4Z2 1342 aaPredicted RBP16.24■□□□□ 0.19
SPIDR-205ENST00000518060 ITGAEP38570 1179 aa16.24■□□□□ 0.19
SPIDR-205ENST00000518060 THEMISQ8N1K5 641 aaPredicted RBP16.24■□□□□ 0.19
SPIDR-205ENST00000518060 SPATA31D1Q6ZQQ2 1576 aa16.23■□□□□ 0.19
SPIDR-205ENST00000518060 ANKLE2Q86XL3 938 aa16.23■□□□□ 0.19
SPIDR-205ENST00000518060 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
SPIDR-205ENST00000518060 ANKRD50Q9ULJ7 1429 aa16.2■□□□□ 0.18
SPIDR-205ENST00000518060 DEPDC5O75140 1603 aa16.2■□□□□ 0.18
SPIDR-205ENST00000518060 LTBP4Q8N2S1 1624 aa16.2■□□□□ 0.18
SPIDR-205ENST00000518060 ARHGAP31Q2M1Z3 1444 aa16.19■□□□□ 0.18
SPIDR-205ENST00000518060 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
SPIDR-205ENST00000518060 POLR1AO95602 1720 aaPredicted RBP16.18■□□□□ 0.18
SPIDR-205ENST00000518060 NPHP4O75161 1426 aaPredicted RBP16.17■□□□□ 0.18
SPIDR-205ENST00000518060 NEURL4Q96JN8 1562 aa16.17■□□□□ 0.18
SPIDR-205ENST00000518060 CFAP65Q6ZU64 1925 aaKnown RBP16.15■□□□□ 0.18
SPIDR-205ENST00000518060 LMTK2Q8IWU2 1503 aa16.14■□□□□ 0.18
SPIDR-205ENST00000518060 EFCAB6Q5THR3 1501 aa16.14■□□□□ 0.17
SPIDR-205ENST00000518060 VWDEQ8N2E2 1590 aa16.13■□□□□ 0.17
SPIDR-205ENST00000518060 ROCK1Q13464 1354 aa16.13■□□□□ 0.17
SPIDR-205ENST00000518060 IQSEC2Q5JU85 1478 aa16.12■□□□□ 0.17
SPIDR-205ENST00000518060 UBAP1LF5GYI3 381 aa16.12■□□□□ 0.17
SPIDR-205ENST00000518060 UBR1Q8IWV7 1749 aa16.11■□□□□ 0.17
SPIDR-205ENST00000518060 EID1Q9Y6B2 187 aa16.11■□□□□ 0.17
SPIDR-205ENST00000518060 SCAF11Q99590 1463 aaKnown RBP16.1■□□□□ 0.17
SPIDR-205ENST00000518060 PIK3C2BO00750 1634 aa16.1■□□□□ 0.17
SPIDR-205ENST00000518060 TXNDC2Q86VQ3 553 aa16.1■□□□□ 0.17
SPIDR-205ENST00000518060 IQGAP1P46940 1657 aa16.1■□□□□ 0.17
SPIDR-205ENST00000518060 MED14O60244 1454 aa16.1■□□□□ 0.17
SPIDR-205ENST00000518060 IDI1Q13907 227 aa16.08■□□□□ 0.16
SPIDR-205ENST00000518060 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.16
SPIDR-205ENST00000518060 CPS1P31327 1500 aa16.08■□□□□ 0.16
SPIDR-205ENST00000518060 SYNMO15061 1565 aa16.08■□□□□ 0.16
SPIDR-205ENST00000518060 LTKP29376 864 aa16.07■□□□□ 0.16
SPIDR-205ENST00000518060 UNC13BO14795 1591 aa16.07■□□□□ 0.16
SPIDR-205ENST00000518060 RPRD2Q5VT52 1461 aaKnown RBP16.06■□□□□ 0.16
SPIDR-205ENST00000518060 NOS1P29475 1434 aa16.06■□□□□ 0.16
SPIDR-205ENST00000518060 TMEM2Q9UHN6 1383 aa16.06■□□□□ 0.16
SPIDR-205ENST00000518060 TET3O43151 1660 aa16.05■□□□□ 0.16
SPIDR-205ENST00000518060 SLIT1O75093 1534 aa16.05■□□□□ 0.16
SPIDR-205ENST00000518060 ARHGAP23Q9P227 1491 aa16.05■□□□□ 0.16
SPIDR-205ENST00000518060 NUP155O75694 1391 aa16.05■□□□□ 0.16
SPIDR-205ENST00000518060 CHGAP10645 457 aaKnown RBP16.05■□□□□ 0.16
SPIDR-205ENST00000518060 BCANQ96GW7 911 aa16.05■□□□□ 0.16
SPIDR-205ENST00000518060 ADGRB3O60242 1522 aa16.04■□□□□ 0.16
SPIDR-205ENST00000518060 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-205ENST00000518060 SLC52A1Q9NWF4 448 aa16.04■□□□□ 0.16
SPIDR-205ENST00000518060 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
SPIDR-205ENST00000518060 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
SPIDR-205ENST00000518060 PPP1R15AO75807 674 aaPredicted RBP16.02■□□□□ 0.16
SPIDR-205ENST00000518060 GCC2Q8IWJ2 1684 aa16.02■□□□□ 0.15
SPIDR-205ENST00000518060 IQGAP3Q86VI3 1631 aa16.01■□□□□ 0.15
SPIDR-205ENST00000518060 TOM1O60784 492 aa16■□□□□ 0.15
SPIDR-205ENST00000518060 KDM5AP29375 1690 aaKnown RBP15.99■□□□□ 0.15
SPIDR-205ENST00000518060 SLC26A8Q96RN1 970 aa15.98■□□□□ 0.15
SPIDR-205ENST00000518060 E9PCH4 1651 aa15.98■□□□□ 0.15
SPIDR-205ENST00000518060 LRRC7Q96NW7 1537 aa15.96■□□□□ 0.15
SPIDR-205ENST00000518060 RIMS2Q9UQ26 1411 aa15.95■□□□□ 0.14
SPIDR-205ENST00000518060 DISP3Q9P2K9 1392 aa15.95■□□□□ 0.14
SPIDR-205ENST00000518060 HDGFP51858 240 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms