RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-213ENST00000515859 MPHOSPH9Q99550 1183 aa36.54■■■■□ 3.44
TUSC3-213ENST00000515859 KDM5DQ9BY66 1539 aa36.54■■■■□ 3.44
TUSC3-213ENST00000515859 ARHGEF40Q8TER5 1519 aa36.51■■■■□ 3.44
TUSC3-213ENST00000515859 REREQ9P2R6 1566 aa36.51■■■■□ 3.44
TUSC3-213ENST00000515859 SLC4A1APQ9BWU0 796 aaKnown RBP36.5■■■■□ 3.43
TUSC3-213ENST00000515859 PZPP20742 1482 aa36.48■■■■□ 3.43
TUSC3-213ENST00000515859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.48■■■■□ 3.43
TUSC3-213ENST00000515859 BCORL1Q5H9F3 1711 aa36.47■■■■□ 3.43
TUSC3-213ENST00000515859 DEPDC5O75140 1603 aa36.46■■■■□ 3.43
TUSC3-213ENST00000515859 KANK1Q14678 1352 aa36.43■■■■□ 3.42
TUSC3-213ENST00000515859 FAM135AQ9P2D6 1515 aa36.41■■■■□ 3.42
TUSC3-213ENST00000515859 RNF17Q9BXT8 1623 aaKnown RBP36.41■■■■□ 3.42
TUSC3-213ENST00000515859 AGLP35573 1532 aa36.41■■■■□ 3.42
TUSC3-213ENST00000515859 IQGAP3Q86VI3 1631 aa36.4■■■■□ 3.42
TUSC3-213ENST00000515859 PRDM15P57071 1507 aaPredicted RBP36.39■■■■□ 3.42
TUSC3-213ENST00000515859 ZEB1P37275 1124 aaPredicted RBP36.36■■■■□ 3.41
TUSC3-213ENST00000515859 MROH1Q8NDA8 1641 aa36.35■■■■□ 3.41
TUSC3-213ENST00000515859 VWDEQ8N2E2 1590 aa36.34■■■■□ 3.41
TUSC3-213ENST00000515859 PKD2Q13563 968 aa36.34■■■■□ 3.41
TUSC3-213ENST00000515859 GGT6Q6P531 493 aa36.34■■■■□ 3.41
TUSC3-213ENST00000515859 PPP6R1Q9UPN7 881 aa36.28■■■■□ 3.4
TUSC3-213ENST00000515859 LMTK2Q8IWU2 1503 aa36.25■■■■□ 3.39
TUSC3-213ENST00000515859 FOXD1Q16676 465 aa36.25■■■■□ 3.39
TUSC3-213ENST00000515859 WASHC2CQ9Y4E1 1318 aa36.23■■■■□ 3.39
TUSC3-213ENST00000515859 ANKRD30BQ9BXX2 1392 aa36.22■■■■□ 3.39
TUSC3-213ENST00000515859 TET3O43151 1660 aa36.21■■■■□ 3.39
TUSC3-213ENST00000515859 SIGLEC1Q9BZZ2 1709 aa36.2■■■■□ 3.39
TUSC3-213ENST00000515859 ARID4BQ4LE39 1312 aaPredicted RBP36.19■■■■□ 3.38
TUSC3-213ENST00000515859 ABCC3O15438 1527 aa36.16■■■■□ 3.38
TUSC3-213ENST00000515859 SIN3AQ96ST3 1273 aa36.15■■■■□ 3.38
TUSC3-213ENST00000515859 ZC3H13Q5T200 1668 aaKnown RBP36.14■■■■□ 3.38
TUSC3-213ENST00000515859 EFCAB6Q5THR3 1501 aa36.12■■■■□ 3.37
TUSC3-213ENST00000515859 CEP152O94986 1710 aa36.11■■■■□ 3.37
TUSC3-213ENST00000515859 NEUROD1Q13562 356 aa36.09■■■■□ 3.37
TUSC3-213ENST00000515859 MLECQ14165 292 aa36.09■■■■□ 3.37
TUSC3-213ENST00000515859 E9PCH4 1651 aa36.09■■■■□ 3.37
TUSC3-213ENST00000515859 RPRD2Q5VT52 1461 aaKnown RBP36.09■■■■□ 3.37
TUSC3-213ENST00000515859 TIMELESSQ9UNS1 1208 aa36.07■■■■□ 3.36
TUSC3-213ENST00000515859 ARHGAP31Q2M1Z3 1444 aa36.06■■■■□ 3.36
TUSC3-213ENST00000515859 ESF1Q9H501 851 aaKnown RBP36.03■■■■□ 3.36
TUSC3-213ENST00000515859 CAMSAP1Q5T5Y3 1602 aa36.03■■■■□ 3.36
TUSC3-213ENST00000515859 PTPRTO14522 1441 aa36.02■■■■□ 3.36
TUSC3-213ENST00000515859 NPATQ14207 1427 aa36.02■■■■□ 3.36
TUSC3-213ENST00000515859 PLA2R1Q13018 1463 aa36.01■■■■□ 3.36
TUSC3-213ENST00000515859 CCDC144AA2RUR9 1427 aa35.98■■■■□ 3.35
TUSC3-213ENST00000515859 CNTLNQ9NXG0 1405 aa35.96■■■■□ 3.35
TUSC3-213ENST00000515859 TRPM2O94759 1503 aa35.94■■■■□ 3.34
TUSC3-213ENST00000515859 TONSLQ96HA7 1378 aa35.93■■■■□ 3.34
TUSC3-213ENST00000515859 SPHKAPQ2M3C7 1700 aa35.93■■■■□ 3.34
TUSC3-213ENST00000515859 CLTCQ00610 1675 aaKnown RBP35.92■■■■□ 3.34
TUSC3-213ENST00000515859 NOS1P29475 1434 aa35.88■■■■□ 3.33
TUSC3-213ENST00000515859 ZMYM3Q14202 1370 aa35.87■■■■□ 3.33
TUSC3-213ENST00000515859 MROH2AA6NES4 1674 aa35.81■■■■□ 3.32
TUSC3-213ENST00000515859 CFAP65Q6ZU64 1925 aaKnown RBP35.78■■■■□ 3.32
TUSC3-213ENST00000515859 ERVK-7P63135 1459 aa35.78■■■■□ 3.32
TUSC3-213ENST00000515859 L3MBTL2Q969R5 705 aa35.77■■■■□ 3.32
TUSC3-213ENST00000515859 PREX1Q8TCU6 1659 aa35.77■■■■□ 3.32
TUSC3-213ENST00000515859 CLTCL1P53675 1640 aa35.77■■■■□ 3.32
TUSC3-213ENST00000515859 FER1L4A9Z1Z3 1794 aa35.77■■■■□ 3.32
TUSC3-213ENST00000515859 SLC52A1Q9NWF4 448 aa35.76■■■■□ 3.32
TUSC3-213ENST00000515859 FBXO31Q5XUX0 539 aaPredicted RBP35.75■■■■□ 3.31
TUSC3-213ENST00000515859 PPP1R15AO75807 674 aaPredicted RBP35.74■■■■□ 3.31
TUSC3-213ENST00000515859 SPATA31D1Q6ZQQ2 1576 aa35.73■■■■□ 3.31
TUSC3-213ENST00000515859 SYNMO15061 1565 aa35.72■■■■□ 3.31
TUSC3-213ENST00000515859 ADAMTSL3P82987 1691 aa35.7■■■■□ 3.31
TUSC3-213ENST00000515859 SPATA31E1Q6ZUB1 1445 aa35.7■■■■□ 3.31
TUSC3-213ENST00000515859 NEURL4Q96JN8 1562 aa35.7■■■■□ 3.3
TUSC3-213ENST00000515859 UGGT1Q9NYU2 1555 aa35.7■■■■□ 3.3
TUSC3-213ENST00000515859 PIK3C2BO00750 1634 aa35.68■■■■□ 3.3
TUSC3-213ENST00000515859 MADDQ8WXG6 1647 aa35.66■■■■□ 3.3
TUSC3-213ENST00000515859 RGL3Q3MIN7 710 aa35.65■■■■□ 3.3
TUSC3-213ENST00000515859 IDI1Q13907 227 aa35.65■■■■□ 3.3
TUSC3-213ENST00000515859 KIF1BO60333 1816 aa35.63■■■■□ 3.29
TUSC3-213ENST00000515859 C3P01024 1663 aa35.61■■■■□ 3.29
TUSC3-213ENST00000515859 TNRQ92752 1358 aa35.6■■■■□ 3.29
TUSC3-213ENST00000515859 STAC3Q96MF2 364 aa35.6■■■■□ 3.29
TUSC3-213ENST00000515859 CEBPAP49715 358 aaPredicted RBP35.59■■■■□ 3.29
TUSC3-213ENST00000515859 DCAF11Q8TEB1 546 aa35.58■■■■□ 3.29
TUSC3-213ENST00000515859 RIMS1Q86UR5 1692 aaKnown RBP35.57■■■■□ 3.29
TUSC3-213ENST00000515859 ADGRB3O60242 1522 aa35.57■■■■□ 3.28
TUSC3-213ENST00000515859 CHGAP10645 457 aaKnown RBP35.57■■■■□ 3.28
TUSC3-213ENST00000515859 RPGRIP1LQ68CZ1 1315 aa35.51■■■■□ 3.27
TUSC3-213ENST00000515859 KDM2AQ9Y2K7 1162 aa35.5■■■■□ 3.27
TUSC3-213ENST00000515859 ZNF326Q5BKZ1 582 aaKnown RBP35.5■■■■□ 3.27
TUSC3-213ENST00000515859 UHRF1BP1Q6BDS2 1440 aa35.49■■■■□ 3.27
TUSC3-213ENST00000515859 STAG3Q9UJ98 1225 aa35.48■■■■□ 3.27
TUSC3-213ENST00000515859 NLRP1Q9C000 1473 aa35.48■■■■□ 3.27
TUSC3-213ENST00000515859 TMEM131LA2VDJ0 1609 aa35.47■■■■□ 3.27
TUSC3-213ENST00000515859 PLPPR3Q6T4P5 718 aa35.45■■■■□ 3.27
TUSC3-213ENST00000515859 NBPF8Q3BBV2 869 aa35.44■■■■□ 3.26
TUSC3-213ENST00000515859 PTPRMP28827 1452 aa35.42■■■■□ 3.26
TUSC3-213ENST00000515859 PRAG1Q86YV5 1406 aa35.4■■■■□ 3.26
TUSC3-213ENST00000515859 A2ML1A8K2U0 1454 aa35.39■■■■□ 3.26
TUSC3-213ENST00000515859 MYOM2P54296 1465 aa35.39■■■■□ 3.26
TUSC3-213ENST00000515859 KDM5AP29375 1690 aaKnown RBP35.38■■■■□ 3.25
TUSC3-213ENST00000515859 IFT172Q9UG01 1749 aa35.35■■■■□ 3.25
TUSC3-213ENST00000515859 VGFO15240 615 aaPredicted RBP35.35■■■■□ 3.25
TUSC3-213ENST00000515859 NEXMIFQ5QGS0 1516 aa35.33■■■■□ 3.25
TUSC3-213ENST00000515859 PPLO60437 1756 aa35.32■■■■□ 3.24
TUSC3-213ENST00000515859 MYO5BQ9ULV0 1848 aa35.32■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms