RNA–Protein interactions for RNA: ENST00000515707.1

ABCC3-217, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3 BASIC

Gene ABCC3, Length 656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-217ENST00000515707 ZMYM3Q14202 1370 aa31.34■■■□□ 2.61
ABCC3-217ENST00000515707 KIF3BO15066 747 aa31.34■■■□□ 2.61
ABCC3-217ENST00000515707 ZC3H13Q5T200 1668 aaKnown RBP31.3■■■□□ 2.6
ABCC3-217ENST00000515707 KIF15Q9NS87 1388 aa31.3■■■□□ 2.6
ABCC3-217ENST00000515707 HSPA2P54652 639 aa31.29■■■□□ 2.6
ABCC3-217ENST00000515707 MROH1Q8NDA8 1641 aa31.28■■■□□ 2.6
ABCC3-217ENST00000515707 MYO3AQ8NEV4 1616 aa31.27■■■□□ 2.6
ABCC3-217ENST00000515707 ERBINQ96RT1 1412 aa31.26■■■□□ 2.6
ABCC3-217ENST00000515707 PTPRKQ15262 1439 aa31.25■■■□□ 2.59
ABCC3-217ENST00000515707 ZNF142P52746 1687 aaPredicted RBP31.25■■■□□ 2.59
ABCC3-217ENST00000515707 ADGRL2O95490 1459 aa31.22■■■□□ 2.59
ABCC3-217ENST00000515707 ANKRD30AQ9BXX3 1397 aa31.21■■■□□ 2.59
ABCC3-217ENST00000515707 ABCC3O15438 1527 aa31.21■■■□□ 2.59
ABCC3-217ENST00000515707 PRDM15P57071 1507 aaPredicted RBP31.21■■■□□ 2.59
ABCC3-217ENST00000515707 FAM50AQ14320 339 aaKnown RBP31.21■■■□□ 2.59
ABCC3-217ENST00000515707 PZPP20742 1482 aa31.21■■■□□ 2.59
ABCC3-217ENST00000515707 DEPDC5O75140 1603 aa31.2■■■□□ 2.59
ABCC3-217ENST00000515707 CEP152O94986 1710 aa31.18■■■□□ 2.58
ABCC3-217ENST00000515707 WASHC2CQ9Y4E1 1318 aa31.18■■■□□ 2.58
ABCC3-217ENST00000515707 RRP7BPQ9NSQ0 103 aa31.17■■■□□ 2.58
ABCC3-217ENST00000515707 STRCQ7RTU9 1775 aa31.17■■■□□ 2.58
ABCC3-217ENST00000515707 NCOA1Q15788 1441 aa31.16■■■□□ 2.58
ABCC3-217ENST00000515707 CEP170BQ9Y4F5 1589 aaPredicted RBP31.16■■■□□ 2.58
ABCC3-217ENST00000515707 CAMSAP1Q5T5Y3 1602 aa31.15■■■□□ 2.58
ABCC3-217ENST00000515707 CHIC2Q9UKJ5 165 aa31.13■■■□□ 2.57
ABCC3-217ENST00000515707 PPARGC1BQ86YN6 1023 aaKnown RBP31.11■■■□□ 2.57
ABCC3-217ENST00000515707 TNRQ92752 1358 aa31.05■■■□□ 2.56
ABCC3-217ENST00000515707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.05■■■□□ 2.56
ABCC3-217ENST00000515707 A2ML1A8K2U0 1454 aa31.05■■■□□ 2.56
ABCC3-217ENST00000515707 SPATA31D1Q6ZQQ2 1576 aa31.05■■■□□ 2.56
ABCC3-217ENST00000515707 VWDEQ8N2E2 1590 aa31.03■■■□□ 2.56
ABCC3-217ENST00000515707 FBXO31Q5XUX0 539 aaPredicted RBP31.02■■■□□ 2.56
ABCC3-217ENST00000515707 ERVK-7P63135 1459 aa31.01■■■□□ 2.55
ABCC3-217ENST00000515707 ROCK1Q13464 1354 aa31■■■□□ 2.55
ABCC3-217ENST00000515707 PLA2R1Q13018 1463 aa31■■■□□ 2.55
ABCC3-217ENST00000515707 ANKRD50Q9ULJ7 1429 aa30.99■■■□□ 2.55
ABCC3-217ENST00000515707 NLRP1Q9C000 1473 aa30.99■■■□□ 2.55
ABCC3-217ENST00000515707 RRBP1Q9P2E9 1410 aaKnown RBP30.98■■■□□ 2.55
ABCC3-217ENST00000515707 LMTK2Q8IWU2 1503 aa30.98■■■□□ 2.55
ABCC3-217ENST00000515707 KANK1Q14678 1352 aa30.98■■■□□ 2.55
ABCC3-217ENST00000515707 ARHGAP31Q2M1Z3 1444 aa30.97■■■□□ 2.55
ABCC3-217ENST00000515707 PTPRTO14522 1441 aa30.94■■■□□ 2.54
ABCC3-217ENST00000515707 UNC13BO14795 1591 aa30.94■■■□□ 2.54
ABCC3-217ENST00000515707 DMRT2Q9Y5R5 561 aa30.94■■■□□ 2.54
ABCC3-217ENST00000515707 CFAP65Q6ZU64 1925 aaKnown RBP30.94■■■□□ 2.54
ABCC3-217ENST00000515707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.93■■■□□ 2.54
ABCC3-217ENST00000515707 EFCAB6Q5THR3 1501 aa30.93■■■□□ 2.54
ABCC3-217ENST00000515707 POLR1AO95602 1720 aaPredicted RBP30.92■■■□□ 2.54
ABCC3-217ENST00000515707 UGGT1Q9NYU2 1555 aa30.89■■■□□ 2.54
ABCC3-217ENST00000515707 ITGAEP38570 1179 aa30.86■■■□□ 2.53
ABCC3-217ENST00000515707 TET3O43151 1660 aa30.86■■■□□ 2.53
ABCC3-217ENST00000515707 GCC2Q8IWJ2 1684 aa30.84■■■□□ 2.53
ABCC3-217ENST00000515707 UBR1Q8IWV7 1749 aa30.83■■■□□ 2.53
ABCC3-217ENST00000515707 PKD2Q13563 968 aa30.82■■■□□ 2.52
ABCC3-217ENST00000515707 NEURL4Q96JN8 1562 aa30.81■■■□□ 2.52
ABCC3-217ENST00000515707 IQGAP3Q86VI3 1631 aa30.8■■■□□ 2.52
ABCC3-217ENST00000515707 NCKAP5LQ9HCH0 1330 aa30.8■■■□□ 2.52
ABCC3-217ENST00000515707 SYNMO15061 1565 aa30.79■■■□□ 2.52
ABCC3-217ENST00000515707 RPRD2Q5VT52 1461 aaKnown RBP30.78■■■□□ 2.52
ABCC3-217ENST00000515707 PIK3C2BO00750 1634 aa30.76■■■□□ 2.52
ABCC3-217ENST00000515707 KDM5AP29375 1690 aaKnown RBP30.75■■■□□ 2.51
ABCC3-217ENST00000515707 THEMISQ8N1K5 641 aaPredicted RBP30.74■■■□□ 2.51
ABCC3-217ENST00000515707 ILDR1Q86SU0 546 aaPredicted RBP30.73■■■□□ 2.51
ABCC3-217ENST00000515707 NOS1P29475 1434 aa30.73■■■□□ 2.51
ABCC3-217ENST00000515707 LTBP4Q8N2S1 1624 aa30.71■■■□□ 2.51
ABCC3-217ENST00000515707 E9PCH4 1651 aa30.71■■■□□ 2.51
ABCC3-217ENST00000515707 IQGAP1P46940 1657 aa30.68■■■□□ 2.5
ABCC3-217ENST00000515707 CERKQ8TCT0 537 aa30.67■■■□□ 2.5
ABCC3-217ENST00000515707 MED14O60244 1454 aa30.67■■■□□ 2.5
ABCC3-217ENST00000515707 NAIPQ13075 1403 aa30.66■■■□□ 2.5
ABCC3-217ENST00000515707 SLIT1O75093 1534 aa30.66■■■□□ 2.5
ABCC3-217ENST00000515707 ADGRB3O60242 1522 aa30.65■■■□□ 2.5
ABCC3-217ENST00000515707 ANKLE2Q86XL3 938 aa30.65■■■□□ 2.5
ABCC3-217ENST00000515707 FBXO41Q8TF61 875 aa30.65■■■□□ 2.5
ABCC3-217ENST00000515707 ARHGAP23Q9P227 1491 aa30.64■■■□□ 2.5
ABCC3-217ENST00000515707 NUP155O75694 1391 aa30.63■■■□□ 2.49
ABCC3-217ENST00000515707 HFM1A2PYH4 1435 aa30.63■■■□□ 2.49
ABCC3-217ENST00000515707 NPHP4O75161 1426 aaPredicted RBP30.62■■■□□ 2.49
ABCC3-217ENST00000515707 SCAF11Q99590 1463 aaKnown RBP30.61■■■□□ 2.49
ABCC3-217ENST00000515707 ZNF335Q9H4Z2 1342 aaPredicted RBP30.58■■■□□ 2.49
ABCC3-217ENST00000515707 IQSEC2Q5JU85 1478 aa30.57■■■□□ 2.48
ABCC3-217ENST00000515707 IDI1Q13907 227 aa30.56■■■□□ 2.48
ABCC3-217ENST00000515707 MYO5BQ9ULV0 1848 aa30.55■■■□□ 2.48
ABCC3-217ENST00000515707 TMEM2Q9UHN6 1383 aa30.54■■■□□ 2.48
ABCC3-217ENST00000515707 SLC52A1Q9NWF4 448 aa30.54■■■□□ 2.48
ABCC3-217ENST00000515707 SPHKAPQ2M3C7 1700 aa30.53■■■□□ 2.48
ABCC3-217ENST00000515707 STAG3Q9UJ98 1225 aa30.52■■■□□ 2.48
ABCC3-217ENST00000515707 TMEM131LA2VDJ0 1609 aa30.51■■■□□ 2.48
ABCC3-217ENST00000515707 CPS1P31327 1500 aa30.47■■■□□ 2.47
ABCC3-217ENST00000515707 LTKP29376 864 aa30.45■■■□□ 2.47
ABCC3-217ENST00000515707 TXNDC2Q86VQ3 553 aa30.45■■■□□ 2.47
ABCC3-217ENST00000515707 EID1Q9Y6B2 187 aa30.45■■■□□ 2.47
ABCC3-217ENST00000515707 STRCP1A6NGW2 1772 aa30.41■■■□□ 2.46
ABCC3-217ENST00000515707 ZFYVE9O95405 1425 aa30.4■■■□□ 2.46
ABCC3-217ENST00000515707 TRPM2O94759 1503 aa30.39■■■□□ 2.46
ABCC3-217ENST00000515707 CLTCL1P53675 1640 aa30.35■■■□□ 2.45
ABCC3-217ENST00000515707 RIMS2Q9UQ26 1411 aa30.34■■■□□ 2.45
ABCC3-217ENST00000515707 TRIM52Q96A61 297 aa30.32■■■□□ 2.44
ABCC3-217ENST00000515707 CHGAP10645 457 aaKnown RBP30.29■■■□□ 2.44
ABCC3-217ENST00000515707 PLEKHG1Q9ULL1 1385 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms