RNA–Protein interactions for RNA: ENST00000515425.5

SH3TC2-215, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3TC2, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-215ENST00000515425 GGT6Q6P531 493 aa13.32□□□□□ -0.28
SH3TC2-215ENST00000515425 CDCA7LQ96GN5 454 aa13.32□□□□□ -0.28
SH3TC2-215ENST00000515425 EFCAB2Q5VUJ9 269 aa13.32□□□□□ -0.28
SH3TC2-215ENST00000515425 THOC2Q8NI27 1593 aaKnown RBP13.31□□□□□ -0.28
SH3TC2-215ENST00000515425 CDCA8Q53HL2 280 aa13.3□□□□□ -0.28
SH3TC2-215ENST00000515425 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
SH3TC2-215ENST00000515425 ADAMTS12P58397 1594 aa13.3□□□□□ -0.28
SH3TC2-215ENST00000515425 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
SH3TC2-215ENST00000515425 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
SH3TC2-215ENST00000515425 CRBNQ96SW2 442 aa13.29□□□□□ -0.28
SH3TC2-215ENST00000515425 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
SH3TC2-215ENST00000515425 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
SH3TC2-215ENST00000515425 TRHP20396 242 aaPredicted RBP13.29□□□□□ -0.28
SH3TC2-215ENST00000515425 TCOF1Q13428 1488 aaKnown RBP13.28□□□□□ -0.28
SH3TC2-215ENST00000515425 MAGI3Q5TCQ9 1506 aa13.27□□□□□ -0.29
SH3TC2-215ENST00000515425 KIF3BO15066 747 aa13.26□□□□□ -0.29
SH3TC2-215ENST00000515425 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
SH3TC2-215ENST00000515425 CCDC146Q8IYE0 955 aa13.25□□□□□ -0.29
SH3TC2-215ENST00000515425 ARHGEF11O15085 1522 aa13.24□□□□□ -0.29
SH3TC2-215ENST00000515425 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
SH3TC2-215ENST00000515425 PBRM1Q86U86 1689 aa13.24□□□□□ -0.29
SH3TC2-215ENST00000515425 DISP1Q96F81 1524 aa13.24□□□□□ -0.29
SH3TC2-215ENST00000515425 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
SH3TC2-215ENST00000515425 FRAT1Q92837 279 aaPredicted RBP13.24□□□□□ -0.29
SH3TC2-215ENST00000515425 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
SH3TC2-215ENST00000515425 UPF2Q9HAU5 1272 aaKnown RBP13.24□□□□□ -0.29
SH3TC2-215ENST00000515425 C9orf84Q5VXU9 1444 aa13.24□□□□□ -0.29
SH3TC2-215ENST00000515425 GOLGA2Q08379 1002 aa13.23□□□□□ -0.29
SH3TC2-215ENST00000515425 SAMD9Q5K651 1589 aa13.23□□□□□ -0.29
SH3TC2-215ENST00000515425 NUP153P49790 1475 aaKnown RBP13.23□□□□□ -0.29
SH3TC2-215ENST00000515425 SPAG9O60271 1321 aaKnown RBP13.22□□□□□ -0.29
SH3TC2-215ENST00000515425 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
SH3TC2-215ENST00000515425 ARXQ96QS3 562 aa13.22□□□□□ -0.29
SH3TC2-215ENST00000515425 KDM6BO15054 1643 aa13.21□□□□□ -0.29
SH3TC2-215ENST00000515425 MS4A1P11836 297 aa13.21□□□□□ -0.29
SH3TC2-215ENST00000515425 EIF5BO60841 1220 aaKnown RBP13.21□□□□□ -0.29
SH3TC2-215ENST00000515425 CEP170Q5SW79 1584 aa13.21□□□□□ -0.3
SH3TC2-215ENST00000515425 FAM69CQ0P6D2 419 aa13.2□□□□□ -0.3
SH3TC2-215ENST00000515425 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
SH3TC2-215ENST00000515425 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
SH3TC2-215ENST00000515425 SKAP1Q86WV1 359 aa13.2□□□□□ -0.3
SH3TC2-215ENST00000515425 RAPGEF3O95398 923 aa13.19□□□□□ -0.3
SH3TC2-215ENST00000515425 ATP10BO94823 1461 aa13.19□□□□□ -0.3
SH3TC2-215ENST00000515425 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
SH3TC2-215ENST00000515425 TEX14Q8IWB6 1497 aa13.18□□□□□ -0.3
SH3TC2-215ENST00000515425 BACH2Q9BYV9 841 aa13.17□□□□□ -0.3
SH3TC2-215ENST00000515425 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
SH3TC2-215ENST00000515425 GPATCH8Q9UKJ3 1502 aaKnown RBP13.17□□□□□ -0.3
SH3TC2-215ENST00000515425 NUP160Q12769 1436 aa13.16□□□□□ -0.3
SH3TC2-215ENST00000515425 BECN1Q14457 450 aa13.16□□□□□ -0.3
SH3TC2-215ENST00000515425 SPATA31E1Q6ZUB1 1445 aa13.16□□□□□ -0.3
SH3TC2-215ENST00000515425 APAF1O14727 1248 aa13.16□□□□□ -0.3
SH3TC2-215ENST00000515425 CENPQQ7L2Z9 268 aaPredicted RBP13.16□□□□□ -0.3
SH3TC2-215ENST00000515425 PZPP20742 1482 aa13.15□□□□□ -0.3
SH3TC2-215ENST00000515425 KIAA0556O60303 1618 aa13.14□□□□□ -0.31
SH3TC2-215ENST00000515425 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
SH3TC2-215ENST00000515425 DENND4BO75064 1496 aaPredicted RBP13.14□□□□□ -0.31
SH3TC2-215ENST00000515425 GCC2Q8IWJ2 1684 aa13.13□□□□□ -0.31
SH3TC2-215ENST00000515425 FAM161AQ3B820 660 aa13.13□□□□□ -0.31
SH3TC2-215ENST00000515425 MORC1Q86VD1 984 aa13.13□□□□□ -0.31
SH3TC2-215ENST00000515425 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
SH3TC2-215ENST00000515425 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
SH3TC2-215ENST00000515425 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
SH3TC2-215ENST00000515425 CFAP53Q96M91 514 aa13.12□□□□□ -0.31
SH3TC2-215ENST00000515425 C20orf194Q5TEA3 1177 aa13.11□□□□□ -0.31
SH3TC2-215ENST00000515425 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
SH3TC2-215ENST00000515425 WASHC2CQ9Y4E1 1318 aa13.11□□□□□ -0.31
SH3TC2-215ENST00000515425 RRP7AQ9Y3A4 280 aaKnown RBP13.1□□□□□ -0.31
SH3TC2-215ENST00000515425 SAFB2Q14151 953 aaKnown RBP eCLIP13.1□□□□□ -0.31
SH3TC2-215ENST00000515425 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
SH3TC2-215ENST00000515425 SLKQ9H2G2 1235 aaPredicted RBP13.1□□□□□ -0.31
SH3TC2-215ENST00000515425 DNMT1P26358 1616 aaKnown RBP13.1□□□□□ -0.31
SH3TC2-215ENST00000515425 RAPGEF6Q8TEU7 1601 aa13.1□□□□□ -0.31
SH3TC2-215ENST00000515425 KANK1Q14678 1352 aa13.1□□□□□ -0.31
SH3TC2-215ENST00000515425 RALGAPBQ86X10 1494 aa13.09□□□□□ -0.31
SH3TC2-215ENST00000515425 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
SH3TC2-215ENST00000515425 RNF123Q5XPI4 1314 aa13.09□□□□□ -0.31
SH3TC2-215ENST00000515425 SCAPERQ9BY12 1400 aa13.09□□□□□ -0.31
SH3TC2-215ENST00000515425 ERBINQ96RT1 1412 aa13.08□□□□□ -0.31
SH3TC2-215ENST00000515425 COG6Q9Y2V7 657 aa13.08□□□□□ -0.32
SH3TC2-215ENST00000515425 CENPJQ9HC77 1338 aaPredicted RBP13.08□□□□□ -0.32
SH3TC2-215ENST00000515425 SLC24A1O60721 1099 aa13.08□□□□□ -0.32
SH3TC2-215ENST00000515425 SPRYD3Q8NCJ5 442 aa13.08□□□□□ -0.32
SH3TC2-215ENST00000515425 GSE1Q14687 1217 aa13.07□□□□□ -0.32
SH3TC2-215ENST00000515425 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
SH3TC2-215ENST00000515425 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
SH3TC2-215ENST00000515425 HSP90AA1P07900 732 aaKnown RBP13.07□□□□□ -0.32
SH3TC2-215ENST00000515425 NFKBIBQ15653 356 aa13.07□□□□□ -0.32
SH3TC2-215ENST00000515425 BCL2L13Q9BXK5 485 aa13.07□□□□□ -0.32
SH3TC2-215ENST00000515425 EIF3AQ14152 1382 aaKnown RBP13.06□□□□□ -0.32
SH3TC2-215ENST00000515425 E9PSI1 815 aa13.06□□□□□ -0.32
SH3TC2-215ENST00000515425 DISP3Q9P2K9 1392 aa13.06□□□□□ -0.32
SH3TC2-215ENST00000515425 TRAK1Q9UPV9 953 aa13.05□□□□□ -0.32
SH3TC2-215ENST00000515425 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.05□□□□□ -0.32
SH3TC2-215ENST00000515425 BCAR3O75815 825 aa13.04□□□□□ -0.32
SH3TC2-215ENST00000515425 LRPPRCP42704 1394 aaKnown RBP13.04□□□□□ -0.32
SH3TC2-215ENST00000515425 U2AF1L5P0DN76 240 aaPredicted RBP13.04□□□□□ -0.32
SH3TC2-215ENST00000515425 U2AF1Q01081 240 aaKnown RBP eCLIP13.04□□□□□ -0.32
SH3TC2-215ENST00000515425 PER1O15534 1290 aaPredicted RBP13.03□□□□□ -0.32
SH3TC2-215ENST00000515425 CCDC141Q6ZP82 1450 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms