RNA–Protein interactions for RNA: ENST00000515090.5

GPM6A-221, Transcript of glycoprotein M6A, human

TSL 2 BASIC

Gene GPM6A, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPM6A-221	ENST00000515090	MYT1L	Q9UL68	1186 aa		12.85	□□□□□ -0.35
GPM6A-221	ENST00000515090	ITSN2	Q9NZM3	1697 aa		12.85	□□□□□ -0.35
GPM6A-221	ENST00000515090	SAMD9L	Q8IVG5	1584 aa		12.85	□□□□□ -0.35
GPM6A-221	ENST00000515090	DIP2C	Q9Y2E4	1556 aa		12.85	□□□□□ -0.35
GPM6A-221	ENST00000515090	ABCA6	Q8N139	1617 aa		12.84	□□□□□ -0.35
GPM6A-221	ENST00000515090	C9orf84	Q5VXU9	1444 aa		12.84	□□□□□ -0.35
GPM6A-221	ENST00000515090	LMTK3	Q96Q04	1460 aa		12.84	□□□□□ -0.35
GPM6A-221	ENST00000515090	ZNF644	Q9H582	1327 aa	Predicted RBP	12.84	□□□□□ -0.35
GPM6A-221	ENST00000515090	FER1L4	A9Z1Z3	1794 aa		12.83	□□□□□ -0.35
GPM6A-221	ENST00000515090	KIDINS220	Q9ULH0	1771 aa		12.83	□□□□□ -0.35
GPM6A-221	ENST00000515090	CLCN6	P51797	869 aa		12.83	□□□□□ -0.36
GPM6A-221	ENST00000515090	MLH3	Q9UHC1	1453 aa		12.82	□□□□□ -0.36
GPM6A-221	ENST00000515090	MTUS2	Q5JR59	1369 aa		12.81	□□□□□ -0.36
GPM6A-221	ENST00000515090	SYCP2	Q9BX26	1530 aa		12.81	□□□□□ -0.36
GPM6A-221	ENST00000515090	CFDP1	Q9UEE9	299 aa	Predicted RBP	12.8	□□□□□ -0.36
GPM6A-221	ENST00000515090	CCNB3	Q8WWL7	1395 aa		12.78	□□□□□ -0.36
GPM6A-221	ENST00000515090	TIAM1	Q13009	1591 aa		12.78	□□□□□ -0.36
GPM6A-221	ENST00000515090	RERE	Q9P2R6	1566 aa		12.76	□□□□□ -0.37
GPM6A-221	ENST00000515090	SPAG9	O60271	1321 aa	Known RBP	12.75	□□□□□ -0.37
GPM6A-221	ENST00000515090	KANK4	Q5T7N3	995 aa	Predicted RBP	12.75	□□□□□ -0.37
GPM6A-221	ENST00000515090	MBD5	Q9P267	1494 aa		12.74	□□□□□ -0.37
GPM6A-221	ENST00000515090	KIAA1107	Q9UPP5	1409 aa		12.74	□□□□□ -0.37
GPM6A-221	ENST00000515090	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.74	□□□□□ -0.37
GPM6A-221	ENST00000515090	AGL	P35573	1532 aa		12.74	□□□□□ -0.37
GPM6A-221	ENST00000515090	EHBP1L1	Q8N3D4	1523 aa		12.73	□□□□□ -0.37
GPM6A-221	ENST00000515090	C3	P01024	1663 aa		12.73	□□□□□ -0.37
GPM6A-221	ENST00000515090	NCOA2	Q15596	1464 aa		12.72	□□□□□ -0.37
GPM6A-221	ENST00000515090	ATP7A	Q04656	1500 aa		12.71	□□□□□ -0.37
GPM6A-221	ENST00000515090	INO80	Q9ULG1	1556 aa	Predicted RBP	12.71	□□□□□ -0.37
GPM6A-221	ENST00000515090	PLSCR2	Q9NRY7	297 aa		12.71	□□□□□ -0.38
GPM6A-221	ENST00000515090	STAG3	Q9UJ98	1225 aa		12.71	□□□□□ -0.38
GPM6A-221	ENST00000515090	VPS8	Q8N3P4	1428 aa		12.7	□□□□□ -0.38
GPM6A-221	ENST00000515090	DCBLD2	Q96PD2	775 aa		12.7	□□□□□ -0.38
GPM6A-221	ENST00000515090	SETD1B	Q9UPS6	1966 aa	Known RBP	12.69	□□□□□ -0.38
GPM6A-221	ENST00000515090	STRC	Q7RTU9	1775 aa		12.68	□□□□□ -0.38
GPM6A-221	ENST00000515090	PREX1	Q8TCU6	1659 aa		12.68	□□□□□ -0.38
GPM6A-221	ENST00000515090	PLEKHH2	Q8IVE3	1493 aa		12.68	□□□□□ -0.38
GPM6A-221	ENST00000515090	GGT6	Q6P531	493 aa		12.68	□□□□□ -0.38
GPM6A-221	ENST00000515090	PLXNC1	O60486	1568 aa		12.68	□□□□□ -0.38
GPM6A-221	ENST00000515090	A2M	P01023	1474 aa		12.68	□□□□□ -0.38
GPM6A-221	ENST00000515090	LRRC9	Q6ZRR7	1453 aa		12.68	□□□□□ -0.38
GPM6A-221	ENST00000515090	ZRANB1	Q9UGI0	708 aa		12.67	□□□□□ -0.38
GPM6A-221	ENST00000515090	CAMSAP2	Q08AD1	1489 aa		12.66	□□□□□ -0.38
GPM6A-221	ENST00000515090	ZMYM3	Q14202	1370 aa		12.66	□□□□□ -0.38
GPM6A-221	ENST00000515090	ZNF579	Q8NAF0	562 aa	Known RBP	12.66	□□□□□ -0.38
GPM6A-221	ENST00000515090	CLTC	Q00610	1675 aa	Known RBP	12.65	□□□□□ -0.38
GPM6A-221	ENST00000515090	ESF1	Q9H501	851 aa	Known RBP	12.65	□□□□□ -0.38
GPM6A-221	ENST00000515090	CREBZF	Q9NS37	354 aa		12.64	□□□□□ -0.39
GPM6A-221	ENST00000515090	ADGB	Q8N7X0	1667 aa		12.64	□□□□□ -0.39
GPM6A-221	ENST00000515090	UHRF1BP1	Q6BDS2	1440 aa		12.63	□□□□□ -0.39
GPM6A-221	ENST00000515090	FBXO41	Q8TF61	875 aa		12.62	□□□□□ -0.39
GPM6A-221	ENST00000515090	DHX29	Q7Z478	1369 aa	Known RBP	12.62	□□□□□ -0.39
GPM6A-221	ENST00000515090	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.62	□□□□□ -0.39
GPM6A-221	ENST00000515090	CCDC141	Q6ZP82	1450 aa		12.61	□□□□□ -0.39
GPM6A-221	ENST00000515090	KIF3B	O15066	747 aa		12.61	□□□□□ -0.39
GPM6A-221	ENST00000515090	CNTLN	Q9NXG0	1405 aa		12.6	□□□□□ -0.39
GPM6A-221	ENST00000515090	MROH2A	A6NES4	1674 aa		12.6	□□□□□ -0.39
GPM6A-221	ENST00000515090	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.6	□□□□□ -0.39
GPM6A-221	ENST00000515090	PTPRK	Q15262	1439 aa		12.6	□□□□□ -0.39
GPM6A-221	ENST00000515090	CERK	Q8TCT0	537 aa		12.58	□□□□□ -0.4
GPM6A-221	ENST00000515090	NCKAP5L	Q9HCH0	1330 aa		12.58	□□□□□ -0.4
GPM6A-221	ENST00000515090	MAP3K1	Q13233	1512 aa		12.58	□□□□□ -0.4
GPM6A-221	ENST00000515090	ARHGEF5	Q12774	1597 aa		12.58	□□□□□ -0.4
GPM6A-221	ENST00000515090	SPDYE4	A6NLX3	237 aa		12.57	□□□□□ -0.4
GPM6A-221	ENST00000515090	NPAT	Q14207	1427 aa		12.56	□□□□□ -0.4
GPM6A-221	ENST00000515090	MYOM3	Q5VTT5	1437 aa		12.56	□□□□□ -0.4
GPM6A-221	ENST00000515090	PAK3	O75914	559 aa	Predicted RBP	12.56	□□□□□ -0.4
GPM6A-221	ENST00000515090	TSPY4	P0CV99	314 aa		12.56	□□□□□ -0.4
GPM6A-221	ENST00000515090	TSPY10	P0CW01	314 aa		12.56	□□□□□ -0.4
GPM6A-221	ENST00000515090	RSPH4A	Q5TD94	716 aa		12.56	□□□□□ -0.4
GPM6A-221	ENST00000515090	CAMSAP1	Q5T5Y3	1602 aa		12.56	□□□□□ -0.4
GPM6A-221	ENST00000515090	NCOA1	Q15788	1441 aa		12.55	□□□□□ -0.4
GPM6A-221	ENST00000515090	MYO3A	Q8NEV4	1616 aa		12.54	□□□□□ -0.4
GPM6A-221	ENST00000515090	GALR2	O43603	387 aa	Predicted RBP	12.53	□□□□□ -0.4
GPM6A-221	ENST00000515090	MIA2	Q96PC5	1412 aa		12.52	□□□□□ -0.4
GPM6A-221	ENST00000515090	CFAP65	Q6ZU64	1925 aa	Known RBP	12.52	□□□□□ -0.41
GPM6A-221	ENST00000515090	WASHC2C	Q9Y4E1	1318 aa		12.52	□□□□□ -0.41
GPM6A-221	ENST00000515090	PTPRT	O14522	1441 aa		12.52	□□□□□ -0.41
GPM6A-221	ENST00000515090	ABCC5	O15440	1437 aa		12.52	□□□□□ -0.41
GPM6A-221	ENST00000515090	MAST1	Q9Y2H9	1570 aa		12.51	□□□□□ -0.41
GPM6A-221	ENST00000515090	TRIM26	Q12899	539 aa	Predicted RBP	12.51	□□□□□ -0.41
GPM6A-221	ENST00000515090	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.51	□□□□□ -0.41
GPM6A-221	ENST00000515090	LTBP4	Q8N2S1	1624 aa		12.5	□□□□□ -0.41
GPM6A-221	ENST00000515090	PTPN23	Q9H3S7	1636 aa		12.5	□□□□□ -0.41
GPM6A-221	ENST00000515090	OTUD5	Q96G74	571 aa		12.5	□□□□□ -0.41
GPM6A-221	ENST00000515090	RRP7BP	Q9NSQ0	103 aa		12.5	□□□□□ -0.41
GPM6A-221	ENST00000515090	CHIC2	Q9UKJ5	165 aa		12.5	□□□□□ -0.41
GPM6A-221	ENST00000515090	ZNF142	P52746	1687 aa	Predicted RBP	12.5	□□□□□ -0.41
GPM6A-221	ENST00000515090	MROH1	Q8NDA8	1641 aa		12.5	□□□□□ -0.41
GPM6A-221	ENST00000515090	DNMT1	P26358	1616 aa	Known RBP	12.49	□□□□□ -0.41
GPM6A-221	ENST00000515090	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	12.49	□□□□□ -0.41
GPM6A-221	ENST00000515090	KDM5D	Q9BY66	1539 aa		12.48	□□□□□ -0.41
GPM6A-221	ENST00000515090	TNR	Q92752	1358 aa		12.48	□□□□□ -0.41
GPM6A-221	ENST00000515090	PZP	P20742	1482 aa		12.48	□□□□□ -0.41
GPM6A-221	ENST00000515090	RNF17	Q9BXT8	1623 aa	Known RBP	12.47	□□□□□ -0.41
GPM6A-221	ENST00000515090	FGD6	Q6ZV73	1430 aa		12.47	□□□□□ -0.41
GPM6A-221	ENST00000515090	A2ML1	A8K2U0	1454 aa		12.47	□□□□□ -0.41
GPM6A-221	ENST00000515090	TCOF1	Q13428	1488 aa	Known RBP	12.47	□□□□□ -0.41
GPM6A-221	ENST00000515090	POTEB2	H3BUK9	544 aa		12.47	□□□□□ -0.41
GPM6A-221	ENST00000515090	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms