RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 TOM1O60784 492 aa13.87□□□□□ -0.19
TRIM6-211ENST00000515022 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
TRIM6-211ENST00000515022 ZBTB22O15209 634 aa13.85□□□□□ -0.19
TRIM6-211ENST00000515022 DNMT1P26358 1616 aaKnown RBP13.85□□□□□ -0.19
TRIM6-211ENST00000515022 A2MP01023 1474 aa13.85□□□□□ -0.19
TRIM6-211ENST00000515022 SHANK2Q9UPX8 1470 aa13.84□□□□□ -0.19
TRIM6-211ENST00000515022 PLXNC1O60486 1568 aa13.83□□□□□ -0.19
TRIM6-211ENST00000515022 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.19
TRIM6-211ENST00000515022 A2ML1A8K2U0 1454 aa13.83□□□□□ -0.2
TRIM6-211ENST00000515022 FBXO31Q5XUX0 539 aaPredicted RBP13.83□□□□□ -0.2
TRIM6-211ENST00000515022 POLR1AO95602 1720 aaPredicted RBP13.83□□□□□ -0.2
TRIM6-211ENST00000515022 GPATCH8Q9UKJ3 1502 aaKnown RBP13.82□□□□□ -0.2
TRIM6-211ENST00000515022 ALKQ9UM73 1620 aa13.82□□□□□ -0.2
TRIM6-211ENST00000515022 INO80Q9ULG1 1556 aaPredicted RBP13.81□□□□□ -0.2
TRIM6-211ENST00000515022 CASKIN1Q8WXD9 1431 aa13.81□□□□□ -0.2
TRIM6-211ENST00000515022 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
TRIM6-211ENST00000515022 CPS1P31327 1500 aa13.8□□□□□ -0.2
TRIM6-211ENST00000515022 CFDP1Q9UEE9 299 aaPredicted RBP13.79□□□□□ -0.2
TRIM6-211ENST00000515022 VWDEQ8N2E2 1590 aa13.79□□□□□ -0.2
TRIM6-211ENST00000515022 RNF39Q9H2S5 420 aa13.78□□□□□ -0.2
TRIM6-211ENST00000515022 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
TRIM6-211ENST00000515022 TNRQ92752 1358 aa13.78□□□□□ -0.2
TRIM6-211ENST00000515022 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRIM6-211ENST00000515022 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
TRIM6-211ENST00000515022 ADGBQ8N7X0 1667 aa13.76□□□□□ -0.21
TRIM6-211ENST00000515022 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
TRIM6-211ENST00000515022 RGS17Q9UGC6 210 aaPredicted RBP13.76□□□□□ -0.21
TRIM6-211ENST00000515022 STRCP1A6NGW2 1772 aa13.76□□□□□ -0.21
TRIM6-211ENST00000515022 ANKLE2Q86XL3 938 aa13.75□□□□□ -0.21
TRIM6-211ENST00000515022 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
TRIM6-211ENST00000515022 CCNB3Q8WWL7 1395 aa13.74□□□□□ -0.21
TRIM6-211ENST00000515022 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
TRIM6-211ENST00000515022 KIF3BO15066 747 aa13.73□□□□□ -0.21
TRIM6-211ENST00000515022 PLEKHH2Q8IVE3 1493 aa13.73□□□□□ -0.21
TRIM6-211ENST00000515022 FYCO1Q9BQS8 1478 aa13.72□□□□□ -0.21
TRIM6-211ENST00000515022 LRRC7Q96NW7 1537 aa13.7□□□□□ -0.22
TRIM6-211ENST00000515022 PZPP20742 1482 aa13.7□□□□□ -0.22
TRIM6-211ENST00000515022 THEMISQ8N1K5 641 aaPredicted RBP13.7□□□□□ -0.22
TRIM6-211ENST00000515022 DHX29Q7Z478 1369 aaKnown RBP13.7□□□□□ -0.22
TRIM6-211ENST00000515022 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
TRIM6-211ENST00000515022 CFAP65Q6ZU64 1925 aaKnown RBP13.68□□□□□ -0.22
TRIM6-211ENST00000515022 WASHC2CQ9Y4E1 1318 aa13.68□□□□□ -0.22
TRIM6-211ENST00000515022 UGGT1Q9NYU2 1555 aa13.68□□□□□ -0.22
TRIM6-211ENST00000515022 MIA2Q96PC5 1412 aa13.68□□□□□ -0.22
TRIM6-211ENST00000515022 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
TRIM6-211ENST00000515022 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
TRIM6-211ENST00000515022 KDM5DQ9BY66 1539 aa13.67□□□□□ -0.22
TRIM6-211ENST00000515022 FAM135AQ9P2D6 1515 aa13.67□□□□□ -0.22
TRIM6-211ENST00000515022 DEPDC5O75140 1603 aa13.67□□□□□ -0.22
TRIM6-211ENST00000515022 MED14O60244 1454 aa13.67□□□□□ -0.22
TRIM6-211ENST00000515022 RNF17Q9BXT8 1623 aaKnown RBP13.66□□□□□ -0.22
TRIM6-211ENST00000515022 MTUS2Q5JR59 1369 aa13.66□□□□□ -0.22
TRIM6-211ENST00000515022 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
TRIM6-211ENST00000515022 C1QBPQ07021 282 aaKnown RBP13.65□□□□□ -0.22
TRIM6-211ENST00000515022 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
TRIM6-211ENST00000515022 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
TRIM6-211ENST00000515022 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
TRIM6-211ENST00000515022 XIRP1Q702N8 1843 aaKnown RBP13.62□□□□□ -0.23
TRIM6-211ENST00000515022 SYNMO15061 1565 aa13.62□□□□□ -0.23
TRIM6-211ENST00000515022 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
TRIM6-211ENST00000515022 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
TRIM6-211ENST00000515022 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
TRIM6-211ENST00000515022 LTKP29376 864 aa13.58□□□□□ -0.24
TRIM6-211ENST00000515022 RBM33Q96EV2 1170 aaKnown RBP13.58□□□□□ -0.24
TRIM6-211ENST00000515022 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
TRIM6-211ENST00000515022 CAMSAP2Q08AD1 1489 aa13.57□□□□□ -0.24
TRIM6-211ENST00000515022 ABCC3O15438 1527 aa13.57□□□□□ -0.24
TRIM6-211ENST00000515022 UBR1Q8IWV7 1749 aa13.56□□□□□ -0.24
TRIM6-211ENST00000515022 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
TRIM6-211ENST00000515022 APLP2Q06481 763 aa13.56□□□□□ -0.24
TRIM6-211ENST00000515022 TXNDC2Q86VQ3 553 aa13.56□□□□□ -0.24
TRIM6-211ENST00000515022 SCAF11Q99590 1463 aaKnown RBP13.55□□□□□ -0.24
TRIM6-211ENST00000515022 EHBP1L1Q8N3D4 1523 aa13.55□□□□□ -0.24
TRIM6-211ENST00000515022 CEP152O94986 1710 aa13.55□□□□□ -0.24
TRIM6-211ENST00000515022 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
TRIM6-211ENST00000515022 FAM135BQ49AJ0 1406 aa13.53□□□□□ -0.24
TRIM6-211ENST00000515022 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
TRIM6-211ENST00000515022 ROBO1Q9Y6N7 1651 aa13.53□□□□□ -0.24
TRIM6-211ENST00000515022 TMEM94Q12767 1356 aa13.52□□□□□ -0.25
TRIM6-211ENST00000515022 TSPY4P0CV99 314 aa13.51□□□□□ -0.25
TRIM6-211ENST00000515022 TSPY10P0CW01 314 aa13.51□□□□□ -0.25
TRIM6-211ENST00000515022 MROH1Q8NDA8 1641 aa13.5□□□□□ -0.25
TRIM6-211ENST00000515022 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
TRIM6-211ENST00000515022 ARHGAP23Q9P227 1491 aa13.48□□□□□ -0.25
TRIM6-211ENST00000515022 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
TRIM6-211ENST00000515022 SLC26A8Q96RN1 970 aa13.48□□□□□ -0.25
TRIM6-211ENST00000515022 EID1Q9Y6B2 187 aa13.48□□□□□ -0.25
TRIM6-211ENST00000515022 ARHGEF5Q12774 1597 aa13.48□□□□□ -0.25
TRIM6-211ENST00000515022 SLIT1O75093 1534 aa13.48□□□□□ -0.25
TRIM6-211ENST00000515022 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
TRIM6-211ENST00000515022 MAP3K1Q13233 1512 aa13.46□□□□□ -0.25
TRIM6-211ENST00000515022 PHLPP1O60346 1717 aa13.46□□□□□ -0.25
TRIM6-211ENST00000515022 PIK3C2BO00750 1634 aa13.46□□□□□ -0.26
TRIM6-211ENST00000515022 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
TRIM6-211ENST00000515022 UPF1Q92900 1129 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRIM6-211ENST00000515022 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
TRIM6-211ENST00000515022 KCNA6P17658 529 aa13.44□□□□□ -0.26
TRIM6-211ENST00000515022 TMEM2Q9UHN6 1383 aa13.44□□□□□ -0.26
TRIM6-211ENST00000515022 EIF2AK4Q9P2K8 1649 aaKnown RBP13.42□□□□□ -0.26
TRIM6-211ENST00000515022 JCADQ9P266 1359 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms