RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 MED14O60244 1454 aa19.9■□□□□ 0.78
SMAD5-210ENST00000515005 DEPDC5O75140 1603 aa19.87■□□□□ 0.77
SMAD5-210ENST00000515005 IQGAP1P46940 1657 aa19.87■□□□□ 0.77
SMAD5-210ENST00000515005 INO80Q9ULG1 1556 aaPredicted RBP19.87■□□□□ 0.77
SMAD5-210ENST00000515005 THEMISQ8N1K5 641 aaPredicted RBP19.86■□□□□ 0.77
SMAD5-210ENST00000515005 SYNMO15061 1565 aa19.86■□□□□ 0.77
SMAD5-210ENST00000515005 ARHGAP35Q9NRY4 1499 aa19.86■□□□□ 0.77
SMAD5-210ENST00000515005 EEA1Q15075 1411 aa19.82■□□□□ 0.76
SMAD5-210ENST00000515005 UPF1Q92900 1129 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMAD5-210ENST00000515005 UGGT1Q9NYU2 1555 aa19.81■□□□□ 0.76
SMAD5-210ENST00000515005 ADGBQ8N7X0 1667 aa19.8■□□□□ 0.76
SMAD5-210ENST00000515005 PZPP20742 1482 aa19.79■□□□□ 0.76
SMAD5-210ENST00000515005 FAM135AQ9P2D6 1515 aa19.79■□□□□ 0.76
SMAD5-210ENST00000515005 XIRP1Q702N8 1843 aaKnown RBP19.79■□□□□ 0.76
SMAD5-210ENST00000515005 MIA2Q96PC5 1412 aa19.77■□□□□ 0.76
SMAD5-210ENST00000515005 GPATCH8Q9UKJ3 1502 aaKnown RBP19.77■□□□□ 0.76
SMAD5-210ENST00000515005 FAM135BQ49AJ0 1406 aa19.76■□□□□ 0.75
SMAD5-210ENST00000515005 KIAA1107Q9UPP5 1409 aa19.76■□□□□ 0.75
SMAD5-210ENST00000515005 NLRP1Q9C000 1473 aa19.76■□□□□ 0.75
SMAD5-210ENST00000515005 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
SMAD5-210ENST00000515005 ZC3H13Q5T200 1668 aaKnown RBP19.73■□□□□ 0.75
SMAD5-210ENST00000515005 UBTFP17480 764 aaKnown RBP19.72■□□□□ 0.75
SMAD5-210ENST00000515005 SRCAPQ6ZRS2 3230 aa19.72■□□□□ 0.75
SMAD5-210ENST00000515005 CCDC18Q5T9S5 1454 aa19.72■□□□□ 0.75
SMAD5-210ENST00000515005 PLEKHH2Q8IVE3 1493 aa19.72■□□□□ 0.75
SMAD5-210ENST00000515005 KDM5DQ9BY66 1539 aa19.71■□□□□ 0.75
SMAD5-210ENST00000515005 KIF3BO15066 747 aa19.7■□□□□ 0.74
SMAD5-210ENST00000515005 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
SMAD5-210ENST00000515005 WASHC2CQ9Y4E1 1318 aa19.69■□□□□ 0.74
SMAD5-210ENST00000515005 DHX29Q7Z478 1369 aaKnown RBP19.69■□□□□ 0.74
SMAD5-210ENST00000515005 ROBO1Q9Y6N7 1651 aa19.68■□□□□ 0.74
SMAD5-210ENST00000515005 TRIM52Q96A61 297 aa19.67■□□□□ 0.74
SMAD5-210ENST00000515005 CASKIN1Q8WXD9 1431 aa19.66■□□□□ 0.74
SMAD5-210ENST00000515005 ZNF644Q9H582 1327 aaPredicted RBP19.63■□□□□ 0.73
SMAD5-210ENST00000515005 SCAF11Q99590 1463 aaKnown RBP19.61■□□□□ 0.73
SMAD5-210ENST00000515005 RTEL1-TNFRSF6BF6WH68 1400 aa19.6■□□□□ 0.73
SMAD5-210ENST00000515005 LTKP29376 864 aa19.6■□□□□ 0.73
SMAD5-210ENST00000515005 MBD5Q9P267 1494 aa19.6■□□□□ 0.73
SMAD5-210ENST00000515005 TMEM94Q12767 1356 aa19.59■□□□□ 0.73
SMAD5-210ENST00000515005 CCNB3Q8WWL7 1395 aa19.59■□□□□ 0.73
SMAD5-210ENST00000515005 JCADQ9P266 1359 aa19.58■□□□□ 0.73
SMAD5-210ENST00000515005 PHLPP1O60346 1717 aa19.58■□□□□ 0.72
SMAD5-210ENST00000515005 UBR1Q8IWV7 1749 aa19.57■□□□□ 0.72
SMAD5-210ENST00000515005 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
SMAD5-210ENST00000515005 TXNDC2Q86VQ3 553 aa19.57■□□□□ 0.72
SMAD5-210ENST00000515005 ZNF772Q68DY9 489 aaPredicted RBP19.56■□□□□ 0.72
SMAD5-210ENST00000515005 RBM33Q96EV2 1170 aaKnown RBP19.56■□□□□ 0.72
SMAD5-210ENST00000515005 LRP6O75581 1613 aa19.55■□□□□ 0.72
SMAD5-210ENST00000515005 CFAP65Q6ZU64 1925 aaKnown RBP19.55■□□□□ 0.72
SMAD5-210ENST00000515005 MAP3K1Q13233 1512 aa19.54■□□□□ 0.72
SMAD5-210ENST00000515005 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
SMAD5-210ENST00000515005 ERVK-7P63135 1459 aa19.53■□□□□ 0.72
SMAD5-210ENST00000515005 LRRC9Q6ZRR7 1453 aa19.53■□□□□ 0.72
SMAD5-210ENST00000515005 MEX3CQ5U5Q3 659 aaKnown RBP19.52■□□□□ 0.72
SMAD5-210ENST00000515005 ARHGAP23Q9P227 1491 aa19.52■□□□□ 0.72
SMAD5-210ENST00000515005 RXRBP28702 533 aa19.51■□□□□ 0.71
SMAD5-210ENST00000515005 PROSER2Q86WR7 435 aaPredicted RBP19.51■□□□□ 0.71
SMAD5-210ENST00000515005 FYCO1Q9BQS8 1478 aa19.51■□□□□ 0.71
SMAD5-210ENST00000515005 SLIT1O75093 1534 aa19.51■□□□□ 0.71
SMAD5-210ENST00000515005 ABCC3O15438 1527 aa19.49■□□□□ 0.71
SMAD5-210ENST00000515005 COL16A1Q07092 1604 aaPredicted RBP19.48■□□□□ 0.71
SMAD5-210ENST00000515005 KCNA6P17658 529 aa19.48■□□□□ 0.71
SMAD5-210ENST00000515005 SLAIN2Q9P270 581 aa19.48■□□□□ 0.71
SMAD5-210ENST00000515005 EID1Q9Y6B2 187 aa19.47■□□□□ 0.71
SMAD5-210ENST00000515005 SPATA31A6Q5VVP1 1343 aa19.47■□□□□ 0.71
SMAD5-210ENST00000515005 TIAM1Q13009 1591 aa19.46■□□□□ 0.71
SMAD5-210ENST00000515005 CDK12Q9NYV4 1490 aaPredicted RBP19.46■□□□□ 0.71
SMAD5-210ENST00000515005 CCDC141Q6ZP82 1450 aa19.43■□□□□ 0.7
SMAD5-210ENST00000515005 PRDM15P57071 1507 aaPredicted RBP19.43■□□□□ 0.7
SMAD5-210ENST00000515005 MSH6P52701 1360 aa19.43■□□□□ 0.7
SMAD5-210ENST00000515005 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
SMAD5-210ENST00000515005 SLC26A8Q96RN1 970 aa19.41■□□□□ 0.7
SMAD5-210ENST00000515005 MTUS2Q5JR59 1369 aa19.41■□□□□ 0.7
SMAD5-210ENST00000515005 TMEM2Q9UHN6 1383 aa19.39■□□□□ 0.69
SMAD5-210ENST00000515005 CEP152O94986 1710 aa19.39■□□□□ 0.69
SMAD5-210ENST00000515005 SHPRHQ149N8 1683 aa19.37■□□□□ 0.69
SMAD5-210ENST00000515005 NKTRP30414 1462 aaKnown RBP19.37■□□□□ 0.69
SMAD5-210ENST00000515005 TET3O43151 1660 aa19.36■□□□□ 0.69
SMAD5-210ENST00000515005 RGS12O14924 1447 aa19.36■□□□□ 0.69
SMAD5-210ENST00000515005 PIK3C2BO00750 1634 aa19.36■□□□□ 0.69
SMAD5-210ENST00000515005 MROH1Q8NDA8 1641 aa19.36■□□□□ 0.69
SMAD5-210ENST00000515005 NWD1Q149M9 1564 aa19.36■□□□□ 0.69
SMAD5-210ENST00000515005 NUTM2BA6NNL0 878 aaPredicted RBP19.35■□□□□ 0.69
SMAD5-210ENST00000515005 NUTM2EB1AL46 878 aaPredicted RBP19.35■□□□□ 0.69
SMAD5-210ENST00000515005 NUTM2AQ8IVF1 878 aaPredicted RBP19.35■□□□□ 0.69
SMAD5-210ENST00000515005 AFF2P51816 1311 aa19.34■□□□□ 0.69
SMAD5-210ENST00000515005 RSPH4AQ5TD94 716 aa19.34■□□□□ 0.69
SMAD5-210ENST00000515005 SETBP1Q9Y6X0 1596 aa19.34■□□□□ 0.69
SMAD5-210ENST00000515005 CAMSAP2Q08AD1 1489 aa19.34■□□□□ 0.69
SMAD5-210ENST00000515005 NUTM2DQ5VT03 806 aaPredicted RBP19.33■□□□□ 0.68
SMAD5-210ENST00000515005 ZRANB1Q9UGI0 708 aa19.33■□□□□ 0.68
SMAD5-210ENST00000515005 KDM5AP29375 1690 aaKnown RBP19.32■□□□□ 0.68
SMAD5-210ENST00000515005 STAG3Q9UJ98 1225 aa19.31■□□□□ 0.68
SMAD5-210ENST00000515005 AHDC1Q5TGY3 1603 aaPredicted RBP19.31■□□□□ 0.68
SMAD5-210ENST00000515005 TSPY4P0CV99 314 aa19.3■□□□□ 0.68
SMAD5-210ENST00000515005 TSPY10P0CW01 314 aa19.3■□□□□ 0.68
SMAD5-210ENST00000515005 EIF2AK4Q9P2K8 1649 aaKnown RBP19.29■□□□□ 0.68
SMAD5-210ENST00000515005 RBM6P78332 1123 aaKnown RBP19.28■□□□□ 0.68
SMAD5-210ENST00000515005 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
SMAD5-210ENST00000515005 EFCAB6Q5THR3 1501 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms