RNA–Protein interactions for RNA: ENST00000514315.2

HMGCR-212, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-212ENST00000514315 MROH2AA6NES4 1674 aa11.74□□□□□ -0.53
HMGCR-212ENST00000514315 SUPT6HQ7KZ85 1726 aaKnown RBP11.74□□□□□ -0.53
HMGCR-212ENST00000514315 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
HMGCR-212ENST00000514315 FMN1Q68DA7 1419 aa11.73□□□□□ -0.53
HMGCR-212ENST00000514315 ESF1Q9H501 851 aaKnown RBP11.73□□□□□ -0.53
HMGCR-212ENST00000514315 PREX2Q70Z35 1606 aa11.72□□□□□ -0.53
HMGCR-212ENST00000514315 ABCC1P33527 1531 aa11.72□□□□□ -0.53
HMGCR-212ENST00000514315 NPATQ14207 1427 aa11.72□□□□□ -0.53
HMGCR-212ENST00000514315 CNTLNQ9NXG0 1405 aa11.71□□□□□ -0.53
HMGCR-212ENST00000514315 HSPA1LP34931 641 aa11.71□□□□□ -0.53
HMGCR-212ENST00000514315 CLTCQ00610 1675 aaKnown RBP11.71□□□□□ -0.54
HMGCR-212ENST00000514315 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
HMGCR-212ENST00000514315 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
HMGCR-212ENST00000514315 TCOF1Q13428 1488 aaKnown RBP11.7□□□□□ -0.54
HMGCR-212ENST00000514315 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.54
HMGCR-212ENST00000514315 PKD2Q13563 968 aa11.69□□□□□ -0.54
HMGCR-212ENST00000514315 PIP4P2Q8N4L2 257 aa11.69□□□□□ -0.54
HMGCR-212ENST00000514315 SAMD9LQ8IVG5 1584 aa11.69□□□□□ -0.54
HMGCR-212ENST00000514315 PTPRKQ15262 1439 aa11.69□□□□□ -0.54
HMGCR-212ENST00000514315 ZNF142P52746 1687 aaPredicted RBP11.68□□□□□ -0.54
HMGCR-212ENST00000514315 PLA2R1Q13018 1463 aa11.67□□□□□ -0.54
HMGCR-212ENST00000514315 MYO3AQ8NEV4 1616 aa11.67□□□□□ -0.54
HMGCR-212ENST00000514315 CLIP1P30622 1438 aa11.66□□□□□ -0.54
HMGCR-212ENST00000514315 MED1Q15648 1581 aaPredicted RBP11.66□□□□□ -0.54
HMGCR-212ENST00000514315 CEP170BQ9Y4F5 1589 aaPredicted RBP11.66□□□□□ -0.54
HMGCR-212ENST00000514315 DNMT1P26358 1616 aaKnown RBP11.65□□□□□ -0.54
HMGCR-212ENST00000514315 ALKQ9UM73 1620 aa11.65□□□□□ -0.54
HMGCR-212ENST00000514315 ZNF777Q9ULD5 760 aaPredicted RBP11.65□□□□□ -0.54
HMGCR-212ENST00000514315 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
HMGCR-212ENST00000514315 GGT6Q6P531 493 aa11.64□□□□□ -0.55
HMGCR-212ENST00000514315 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
HMGCR-212ENST00000514315 GPATCH8Q9UKJ3 1502 aaKnown RBP11.64□□□□□ -0.55
HMGCR-212ENST00000514315 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
HMGCR-212ENST00000514315 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■□□□□ 8.7
HMGCR-212ENST00000514315 SPDYE1Q8NFV5 336 aaPredicted RBP11.63□□□□□ -0.55
HMGCR-212ENST00000514315 PLXNC1O60486 1568 aa11.62□□□□□ -0.55
HMGCR-212ENST00000514315 FBXO31Q5XUX0 539 aaPredicted RBP11.62□□□□□ -0.55
HMGCR-212ENST00000514315 NEURL4Q96JN8 1562 aa11.62□□□□□ -0.55
HMGCR-212ENST00000514315 CASKIN1Q8WXD9 1431 aa11.61□□□□□ -0.55
HMGCR-212ENST00000514315 TOM1O60784 492 aa11.61□□□□□ -0.55
HMGCR-212ENST00000514315 STRCP1A6NGW2 1772 aa11.61□□□□□ -0.55
HMGCR-212ENST00000514315 ATP7AQ04656 1500 aa11.6□□□□□ -0.55
HMGCR-212ENST00000514315 SYCP2Q9BX26 1530 aa11.6□□□□□ -0.55
HMGCR-212ENST00000514315 POLR1AO95602 1720 aaPredicted RBP11.6□□□□□ -0.55
HMGCR-212ENST00000514315 INO80Q9ULG1 1556 aaPredicted RBP11.6□□□□□ -0.55
HMGCR-212ENST00000514315 A2MP01023 1474 aa11.6□□□□□ -0.55
HMGCR-212ENST00000514315 SHANK2Q9UPX8 1470 aa11.6□□□□□ -0.55
HMGCR-212ENST00000514315 RGS17Q9UGC6 210 aaPredicted RBP11.6□□□□□ -0.55
HMGCR-212ENST00000514315 A2ML1A8K2U0 1454 aa11.59□□□□□ -0.55
HMGCR-212ENST00000514315 KIAA1107Q9UPP5 1409 aa11.59□□□□□ -0.55
HMGCR-212ENST00000514315 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
HMGCR-212ENST00000514315 VWDEQ8N2E2 1590 aa11.58□□□□□ -0.56
HMGCR-212ENST00000514315 ZNF644Q9H582 1327 aaPredicted RBP11.58□□□□□ -0.56
HMGCR-212ENST00000514315 CFAP65Q6ZU64 1925 aaKnown RBP11.57□□□□□ -0.56
HMGCR-212ENST00000514315 ADGBQ8N7X0 1667 aa11.57□□□□□ -0.56
HMGCR-212ENST00000514315 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
HMGCR-212ENST00000514315 CPS1P31327 1500 aa11.56□□□□□ -0.56
HMGCR-212ENST00000514315 CFDP1Q9UEE9 299 aaPredicted RBP11.55□□□□□ -0.56
HMGCR-212ENST00000514315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.54□□□□□ -0.56
HMGCR-212ENST00000514315 MBD5Q9P267 1494 aa11.54□□□□□ -0.56
HMGCR-212ENST00000514315 ANKLE2Q86XL3 938 aa11.53□□□□□ -0.56
HMGCR-212ENST00000514315 XIRP1Q702N8 1843 aaKnown RBP11.53□□□□□ -0.56
HMGCR-212ENST00000514315 DHX29Q7Z478 1369 aaKnown RBP11.53□□□□□ -0.56
HMGCR-212ENST00000514315 MED14O60244 1454 aa11.52□□□□□ -0.56
HMGCR-212ENST00000514315 THEMISQ8N1K5 641 aaPredicted RBP11.51□□□□□ -0.57
HMGCR-212ENST00000514315 TNRQ92752 1358 aa11.51□□□□□ -0.57
HMGCR-212ENST00000514315 PLEKHH2Q8IVE3 1493 aa11.51□□□□□ -0.57
HMGCR-212ENST00000514315 LRRC7Q96NW7 1537 aa11.5□□□□□ -0.57
HMGCR-212ENST00000514315 DEPDC5O75140 1603 aa11.5□□□□□ -0.57
HMGCR-212ENST00000514315 KIF3BO15066 747 aa11.5□□□□□ -0.57
HMGCR-212ENST00000514315 MIA2Q96PC5 1412 aa11.5□□□□□ -0.57
HMGCR-212ENST00000514315 HAX1O00165 279 aa11.49□□□□□ -0.57
HMGCR-212ENST00000514315 CCNB3Q8WWL7 1395 aa11.49□□□□□ -0.57
HMGCR-212ENST00000514315 RTEL1-TNFRSF6BF6WH68 1400 aa11.49□□□□□ -0.57
HMGCR-212ENST00000514315 PZPP20742 1482 aa11.49□□□□□ -0.57
HMGCR-212ENST00000514315 FYCO1Q9BQS8 1478 aa11.49□□□□□ -0.57
HMGCR-212ENST00000514315 NPHP4O75161 1426 aaPredicted RBP11.48□□□□□ -0.57
HMGCR-212ENST00000514315 IQGAP1P46940 1657 aa11.48□□□□□ -0.57
HMGCR-212ENST00000514315 ZC3H13Q5T200 1668 aaKnown RBP11.47□□□□□ -0.57
HMGCR-212ENST00000514315 WASHC2CQ9Y4E1 1318 aa11.47□□□□□ -0.57
HMGCR-212ENST00000514315 POTEAQ6S8J7 498 aa11.47□□□□□ -0.57
HMGCR-212ENST00000514315 UGGT1Q9NYU2 1555 aa11.46□□□□□ -0.57
HMGCR-212ENST00000514315 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
HMGCR-212ENST00000514315 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
HMGCR-212ENST00000514315 NLRP1Q9C000 1473 aa11.44□□□□□ -0.58
HMGCR-212ENST00000514315 LTKP29376 864 aa11.43□□□□□ -0.58
HMGCR-212ENST00000514315 KDM5DQ9BY66 1539 aa11.43□□□□□ -0.58
HMGCR-212ENST00000514315 UBR1Q8IWV7 1749 aa11.42□□□□□ -0.58
HMGCR-212ENST00000514315 FAM135AQ9P2D6 1515 aa11.41□□□□□ -0.58
HMGCR-212ENST00000514315 PRR29P0C7W0 189 aa11.41□□□□□ -0.58
HMGCR-212ENST00000514315 RNF17Q9BXT8 1623 aaKnown RBP11.41□□□□□ -0.58
HMGCR-212ENST00000514315 MTUS2Q5JR59 1369 aa11.41□□□□□ -0.58
HMGCR-212ENST00000514315 EVX2Q03828 476 aa11.4□□□□□ -0.58
HMGCR-212ENST00000514315 NCOA2Q15596 1464 aa11.39□□□□□ -0.59
HMGCR-212ENST00000514315 RSPH4AQ5TD94 716 aa11.39□□□□□ -0.59
HMGCR-212ENST00000514315 SYNMO15061 1565 aa11.38□□□□□ -0.59
HMGCR-212ENST00000514315 FAM135BQ49AJ0 1406 aa11.38□□□□□ -0.59
HMGCR-212ENST00000514315 CEP162Q5TB80 1403 aa11.37□□□□□ -0.59
HMGCR-212ENST00000514315 TXNDC2Q86VQ3 553 aa11.37□□□□□ -0.59
HMGCR-212ENST00000514315 CEP152O94986 1710 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms