RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 ZMYM3Q14202 1370 aa21.81■■□□□ 1.08
SNF8-212ENST00000514089 PLXNC1O60486 1568 aa21.81■■□□□ 1.08
SNF8-212ENST00000514089 SIGLEC1Q9BZZ2 1709 aa21.8■■□□□ 1.08
SNF8-212ENST00000514089 ADAMTSL3P82987 1691 aa21.79■■□□□ 1.08
SNF8-212ENST00000514089 MADDQ8WXG6 1647 aa21.79■■□□□ 1.08
SNF8-212ENST00000514089 CROCC2H7BZ55 1655 aa21.76■■□□□ 1.07
SNF8-212ENST00000514089 TRIM52Q96A61 297 aa21.74■■□□□ 1.07
SNF8-212ENST00000514089 RIMS1Q86UR5 1692 aaKnown RBP21.72■■□□□ 1.07
SNF8-212ENST00000514089 FBXO31Q5XUX0 539 aaPredicted RBP21.69■■□□□ 1.06
SNF8-212ENST00000514089 NUP155O75694 1391 aa21.69■■□□□ 1.06
SNF8-212ENST00000514089 FER1L4A9Z1Z3 1794 aa21.68■■□□□ 1.06
SNF8-212ENST00000514089 KDM5DQ9BY66 1539 aa21.67■■□□□ 1.06
SNF8-212ENST00000514089 EIF2AK4Q9P2K8 1649 aaKnown RBP21.66■■□□□ 1.06
SNF8-212ENST00000514089 NAIPQ13075 1403 aa21.66■■□□□ 1.06
SNF8-212ENST00000514089 HFM1A2PYH4 1435 aa21.64■■□□□ 1.06
SNF8-212ENST00000514089 FAM135AQ9P2D6 1515 aa21.61■■□□□ 1.05
SNF8-212ENST00000514089 NPATQ14207 1427 aa21.61■■□□□ 1.05
SNF8-212ENST00000514089 ABCC3O15438 1527 aa21.6■■□□□ 1.05
SNF8-212ENST00000514089 CLTCQ00610 1675 aaKnown RBP21.6■■□□□ 1.05
SNF8-212ENST00000514089 UHRF1BP1Q6BDS2 1440 aa21.6■■□□□ 1.05
SNF8-212ENST00000514089 TNRQ92752 1358 aa21.6■■□□□ 1.05
SNF8-212ENST00000514089 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
SNF8-212ENST00000514089 RNF17Q9BXT8 1623 aaKnown RBP21.59■■□□□ 1.05
SNF8-212ENST00000514089 HSPA2P54652 639 aa21.59■■□□□ 1.05
SNF8-212ENST00000514089 SETD5Q9C0A6 1442 aa21.58■■□□□ 1.05
SNF8-212ENST00000514089 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.05
SNF8-212ENST00000514089 SLC4A1APQ9BWU0 796 aaKnown RBP21.58■■□□□ 1.05
SNF8-212ENST00000514089 STAG3Q9UJ98 1225 aa21.58■■□□□ 1.05
SNF8-212ENST00000514089 PZPP20742 1482 aa21.58■■□□□ 1.04
SNF8-212ENST00000514089 PRDM15P57071 1507 aaPredicted RBP21.56■■□□□ 1.04
SNF8-212ENST00000514089 MROH1Q8NDA8 1641 aa21.53■■□□□ 1.04
SNF8-212ENST00000514089 ARHGAP31Q2M1Z3 1444 aa21.53■■□□□ 1.04
SNF8-212ENST00000514089 MROH2AA6NES4 1674 aa21.52■■□□□ 1.04
SNF8-212ENST00000514089 C3P01024 1663 aa21.52■■□□□ 1.04
SNF8-212ENST00000514089 PKD2Q13563 968 aa21.51■■□□□ 1.03
SNF8-212ENST00000514089 THEMISQ8N1K5 641 aaPredicted RBP21.51■■□□□ 1.03
SNF8-212ENST00000514089 LMTK2Q8IWU2 1503 aa21.5■■□□□ 1.03
SNF8-212ENST00000514089 RAB3GAP2Q9H2M9 1393 aa21.49■■□□□ 1.03
SNF8-212ENST00000514089 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
SNF8-212ENST00000514089 SLC52A1Q9NWF4 448 aa21.49■■□□□ 1.03
SNF8-212ENST00000514089 ZC3H13Q5T200 1668 aaKnown RBP21.49■■□□□ 1.03
SNF8-212ENST00000514089 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
SNF8-212ENST00000514089 MPHOSPH9Q99550 1183 aa21.48■■□□□ 1.03
SNF8-212ENST00000514089 ERVK-7P63135 1459 aa21.47■■□□□ 1.03
SNF8-212ENST00000514089 LMTK3Q96Q04 1460 aa21.47■■□□□ 1.03
SNF8-212ENST00000514089 IDI1Q13907 227 aa21.46■■□□□ 1.03
SNF8-212ENST00000514089 VWDEQ8N2E2 1590 aa21.45■■□□□ 1.02
SNF8-212ENST00000514089 HRCP23327 699 aa21.45■■□□□ 1.02
SNF8-212ENST00000514089 UNC13BO14795 1591 aa21.44■■□□□ 1.02
SNF8-212ENST00000514089 RPRD2Q5VT52 1461 aaKnown RBP21.44■■□□□ 1.02
SNF8-212ENST00000514089 CAMSAP1Q5T5Y3 1602 aa21.44■■□□□ 1.02
SNF8-212ENST00000514089 DMRT2Q9Y5R5 561 aa21.43■■□□□ 1.02
SNF8-212ENST00000514089 NLRP1Q9C000 1473 aa21.43■■□□□ 1.02
SNF8-212ENST00000514089 CEP152O94986 1710 aa21.43■■□□□ 1.02
SNF8-212ENST00000514089 GCC2Q8IWJ2 1684 aa21.41■■□□□ 1.02
SNF8-212ENST00000514089 EFCAB6Q5THR3 1501 aa21.41■■□□□ 1.02
SNF8-212ENST00000514089 A2ML1A8K2U0 1454 aa21.41■■□□□ 1.02
SNF8-212ENST00000514089 FOXD1Q16676 465 aa21.41■■□□□ 1.02
SNF8-212ENST00000514089 ANKLE2Q86XL3 938 aa21.41■■□□□ 1.02
SNF8-212ENST00000514089 NCKAP5LQ9HCH0 1330 aa21.39■■□□□ 1.01
SNF8-212ENST00000514089 EID1Q9Y6B2 187 aa21.39■■□□□ 1.01
SNF8-212ENST00000514089 SPATA31D1Q6ZQQ2 1576 aa21.39■■□□□ 1.01
SNF8-212ENST00000514089 NOS1P29475 1434 aa21.38■■□□□ 1.01
SNF8-212ENST00000514089 SETD1BQ9UPS6 1966 aaKnown RBP21.38■■□□□ 1.01
SNF8-212ENST00000514089 HDGFP51858 240 aaKnown RBP21.38■■□□□ 1.01
SNF8-212ENST00000514089 PREX1Q8TCU6 1659 aa21.37■■□□□ 1.01
SNF8-212ENST00000514089 IQGAP3Q86VI3 1631 aa21.37■■□□□ 1.01
SNF8-212ENST00000514089 TET3O43151 1660 aa21.36■■□□□ 1.01
SNF8-212ENST00000514089 ZNF326Q5BKZ1 582 aaKnown RBP21.35■■□□□ 1.01
SNF8-212ENST00000514089 TXNDC2Q86VQ3 553 aa21.35■■□□□ 1.01
SNF8-212ENST00000514089 BCANQ96GW7 911 aa21.35■■□□□ 1.01
SNF8-212ENST00000514089 UGGT1Q9NYU2 1555 aa21.35■■□□□ 1.01
SNF8-212ENST00000514089 CEP170BQ9Y4F5 1589 aaPredicted RBP21.34■■□□□ 1.01
SNF8-212ENST00000514089 PCGF6Q9BYE7 350 aa21.33■■□□□ 1.01
SNF8-212ENST00000514089 MYO3AQ8NEV4 1616 aa21.32■■□□□ 1
SNF8-212ENST00000514089 PPP1R15AO75807 674 aaPredicted RBP21.31■■□□□ 1
SNF8-212ENST00000514089 PTPRTO14522 1441 aa21.28■■□□□ 1
SNF8-212ENST00000514089 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.27■■□□□ 1
SNF8-212ENST00000514089 TMEM2Q9UHN6 1383 aa21.26■□□□□ 0.99
SNF8-212ENST00000514089 PLA2R1Q13018 1463 aa21.26■□□□□ 0.99
SNF8-212ENST00000514089 CFAP65Q6ZU64 1925 aaKnown RBP21.25■□□□□ 0.99
SNF8-212ENST00000514089 E9PCH4 1651 aa21.25■□□□□ 0.99
SNF8-212ENST00000514089 LTKP29376 864 aa21.25■□□□□ 0.99
SNF8-212ENST00000514089 NUTM2DQ5VT03 806 aaPredicted RBP21.25■□□□□ 0.99
SNF8-212ENST00000514089 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
SNF8-212ENST00000514089 SYNMO15061 1565 aa21.24■□□□□ 0.99
SNF8-212ENST00000514089 CCDC144AA2RUR9 1427 aa21.24■□□□□ 0.99
SNF8-212ENST00000514089 RGL3Q3MIN7 710 aa21.24■□□□□ 0.99
SNF8-212ENST00000514089 ZNF142P52746 1687 aaPredicted RBP21.19■□□□□ 0.98
SNF8-212ENST00000514089 PIK3C2BO00750 1634 aa21.18■□□□□ 0.98
SNF8-212ENST00000514089 NPHP4O75161 1426 aaPredicted RBP21.18■□□□□ 0.98
SNF8-212ENST00000514089 RIMS2Q9UQ26 1411 aa21.18■□□□□ 0.98
SNF8-212ENST00000514089 SCAF11Q99590 1463 aaKnown RBP21.18■□□□□ 0.98
SNF8-212ENST00000514089 ADGRB3O60242 1522 aa21.17■□□□□ 0.98
SNF8-212ENST00000514089 TRPM2O94759 1503 aa21.17■□□□□ 0.98
SNF8-212ENST00000514089 VGFO15240 615 aaPredicted RBP21.16■□□□□ 0.98
SNF8-212ENST00000514089 RPGRIP1LQ68CZ1 1315 aa21.15■□□□□ 0.98
SNF8-212ENST00000514089 SLC26A8Q96RN1 970 aa21.15■□□□□ 0.98
SNF8-212ENST00000514089 ANKRD30BQ9BXX2 1392 aa21.13■□□□□ 0.97
SNF8-212ENST00000514089 SLIT1O75093 1534 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms