RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 PPARGC1BQ86YN6 1023 aaKnown RBP13.58□□□□□ -0.24
HERC4-214ENST00000513996 MAST1Q9Y2H9 1570 aa13.58□□□□□ -0.24
HERC4-214ENST00000513996 PTPN23Q9H3S7 1636 aa13.57□□□□□ -0.24
HERC4-214ENST00000513996 TCOF1Q13428 1488 aaKnown RBP13.57□□□□□ -0.24
HERC4-214ENST00000513996 UHRF1BP1Q6BDS2 1440 aa13.56□□□□□ -0.24
HERC4-214ENST00000513996 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
HERC4-214ENST00000513996 RRP7BPQ9NSQ0 103 aa13.56□□□□□ -0.24
HERC4-214ENST00000513996 CHIC2Q9UKJ5 165 aa13.56□□□□□ -0.24
HERC4-214ENST00000513996 CLTCQ00610 1675 aaKnown RBP13.56□□□□□ -0.24
HERC4-214ENST00000513996 NPATQ14207 1427 aa13.56□□□□□ -0.24
HERC4-214ENST00000513996 PTPRKQ15262 1439 aa13.56□□□□□ -0.24
HERC4-214ENST00000513996 PREX1Q8TCU6 1659 aa13.55□□□□□ -0.24
HERC4-214ENST00000513996 DAPK1P53355 1430 aa13.55□□□□□ -0.24
HERC4-214ENST00000513996 MROH2AA6NES4 1674 aa13.54□□□□□ -0.24
HERC4-214ENST00000513996 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
HERC4-214ENST00000513996 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
HERC4-214ENST00000513996 WASHC2CQ9Y4E1 1318 aa13.54□□□□□ -0.24
HERC4-214ENST00000513996 FAM50AQ14320 339 aaKnown RBP13.53□□□□□ -0.24
HERC4-214ENST00000513996 KIF15Q9NS87 1388 aa13.52□□□□□ -0.25
HERC4-214ENST00000513996 DNMT1P26358 1616 aaKnown RBP13.5□□□□□ -0.25
HERC4-214ENST00000513996 SHANK2Q9UPX8 1470 aa13.5□□□□□ -0.25
HERC4-214ENST00000513996 STRCQ7RTU9 1775 aa13.5□□□□□ -0.25
HERC4-214ENST00000513996 DUOX2Q9NRD8 1548 aa13.49□□□□□ -0.25
HERC4-214ENST00000513996 NCOA1Q15788 1441 aa13.49□□□□□ -0.25
HERC4-214ENST00000513996 KDM5DQ9BY66 1539 aa13.49□□□□□ -0.25
HERC4-214ENST00000513996 ANKRD30AQ9BXX3 1397 aa13.47□□□□□ -0.25
HERC4-214ENST00000513996 MROH1Q8NDA8 1641 aa13.47□□□□□ -0.25
HERC4-214ENST00000513996 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
HERC4-214ENST00000513996 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
HERC4-214ENST00000513996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
HERC4-214ENST00000513996 PZPP20742 1482 aa13.47□□□□□ -0.25
HERC4-214ENST00000513996 CROCC2H7BZ55 1655 aa13.47□□□□□ -0.25
HERC4-214ENST00000513996 TNRQ92752 1358 aa13.46□□□□□ -0.25
HERC4-214ENST00000513996 RNF17Q9BXT8 1623 aaKnown RBP13.46□□□□□ -0.25
HERC4-214ENST00000513996 ABCC3O15438 1527 aa13.45□□□□□ -0.26
HERC4-214ENST00000513996 FAM135AQ9P2D6 1515 aa13.45□□□□□ -0.26
HERC4-214ENST00000513996 EIF2AK4Q9P2K8 1649 aaKnown RBP13.45□□□□□ -0.26
HERC4-214ENST00000513996 ERBINQ96RT1 1412 aa13.45□□□□□ -0.26
HERC4-214ENST00000513996 CAMSAP1Q5T5Y3 1602 aa13.44□□□□□ -0.26
HERC4-214ENST00000513996 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
HERC4-214ENST00000513996 ADGRL2O95490 1459 aa13.43□□□□□ -0.26
HERC4-214ENST00000513996 PTPRTO14522 1441 aa13.43□□□□□ -0.26
HERC4-214ENST00000513996 MYO3AQ8NEV4 1616 aa13.42□□□□□ -0.26
HERC4-214ENST00000513996 A2ML1A8K2U0 1454 aa13.42□□□□□ -0.26
HERC4-214ENST00000513996 CEP170BQ9Y4F5 1589 aaPredicted RBP13.42□□□□□ -0.26
HERC4-214ENST00000513996 CERKQ8TCT0 537 aa13.42□□□□□ -0.26
HERC4-214ENST00000513996 ITGAEP38570 1179 aa13.41□□□□□ -0.26
HERC4-214ENST00000513996 PKD2Q13563 968 aa13.41□□□□□ -0.26
HERC4-214ENST00000513996 FBXO41Q8TF61 875 aa13.41□□□□□ -0.26
HERC4-214ENST00000513996 ZNF142P52746 1687 aaPredicted RBP13.4□□□□□ -0.26
HERC4-214ENST00000513996 ERVK-7P63135 1459 aa13.39□□□□□ -0.27
HERC4-214ENST00000513996 PLA2R1Q13018 1463 aa13.39□□□□□ -0.27
HERC4-214ENST00000513996 CFAP65Q6ZU64 1925 aaKnown RBP13.39□□□□□ -0.27
HERC4-214ENST00000513996 CEP152O94986 1710 aa13.39□□□□□ -0.27
HERC4-214ENST00000513996 PRDM15P57071 1507 aaPredicted RBP13.39□□□□□ -0.27
HERC4-214ENST00000513996 ARHGAP31Q2M1Z3 1444 aa13.39□□□□□ -0.27
HERC4-214ENST00000513996 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
HERC4-214ENST00000513996 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
HERC4-214ENST00000513996 NLRP1Q9C000 1473 aa13.37□□□□□ -0.27
HERC4-214ENST00000513996 KANK1Q14678 1352 aa13.37□□□□□ -0.27
HERC4-214ENST00000513996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.37□□□□□ -0.273e-7■■■□□ 17.8
HERC4-214ENST00000513996 THEMISQ8N1K5 641 aaPredicted RBP13.37□□□□□ -0.27
HERC4-214ENST00000513996 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
HERC4-214ENST00000513996 VWDEQ8N2E2 1590 aa13.37□□□□□ -0.27
HERC4-214ENST00000513996 DEPDC5O75140 1603 aa13.36□□□□□ -0.27
HERC4-214ENST00000513996 ROCK1Q13464 1354 aa13.36□□□□□ -0.27
HERC4-214ENST00000513996 ANKLE2Q86XL3 938 aa13.35□□□□□ -0.27
HERC4-214ENST00000513996 ZNF335Q9H4Z2 1342 aaPredicted RBP13.35□□□□□ -0.27
HERC4-214ENST00000513996 LMTK2Q8IWU2 1503 aa13.34□□□□□ -0.27
HERC4-214ENST00000513996 RRBP1Q9P2E9 1410 aaKnown RBP13.34□□□□□ -0.27
HERC4-214ENST00000513996 UGGT1Q9NYU2 1555 aa13.33□□□□□ -0.28
HERC4-214ENST00000513996 LTBP4Q8N2S1 1624 aa13.33□□□□□ -0.28
HERC4-214ENST00000513996 IDI1Q13907 227 aa13.33□□□□□ -0.28
HERC4-214ENST00000513996 LTKP29376 864 aa13.31□□□□□ -0.28
HERC4-214ENST00000513996 NOS1P29475 1434 aa13.3□□□□□ -0.28
HERC4-214ENST00000513996 NEURL4Q96JN8 1562 aa13.3□□□□□ -0.28
HERC4-214ENST00000513996 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
HERC4-214ENST00000513996 NPHP4O75161 1426 aaPredicted RBP13.28□□□□□ -0.28
HERC4-214ENST00000513996 EFCAB6Q5THR3 1501 aa13.28□□□□□ -0.28
HERC4-214ENST00000513996 NUP155O75694 1391 aa13.27□□□□□ -0.29
HERC4-214ENST00000513996 MED14O60244 1454 aa13.27□□□□□ -0.29
HERC4-214ENST00000513996 SYNMO15061 1565 aa13.27□□□□□ -0.29
HERC4-214ENST00000513996 UBR1Q8IWV7 1749 aa13.26□□□□□ -0.29
HERC4-214ENST00000513996 SLC52A1Q9NWF4 448 aa13.26□□□□□ -0.29
HERC4-214ENST00000513996 ARHGAP23Q9P227 1491 aa13.26□□□□□ -0.29
HERC4-214ENST00000513996 UNC13BO14795 1591 aa13.25□□□□□ -0.29
HERC4-214ENST00000513996 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
HERC4-214ENST00000513996 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
HERC4-214ENST00000513996 TMEM2Q9UHN6 1383 aa13.24□□□□□ -0.29
HERC4-214ENST00000513996 POLR1AO95602 1720 aaPredicted RBP13.24□□□□□ -0.29
HERC4-214ENST00000513996 SLIT1O75093 1534 aa13.23□□□□□ -0.29
HERC4-214ENST00000513996 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
HERC4-214ENST00000513996 NAIPQ13075 1403 aa13.23□□□□□ -0.29
HERC4-214ENST00000513996 TET3O43151 1660 aa13.23□□□□□ -0.29
HERC4-214ENST00000513996 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
HERC4-214ENST00000513996 EID1Q9Y6B2 187 aa13.22□□□□□ -0.29
HERC4-214ENST00000513996 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
HERC4-214ENST00000513996 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.3
HERC4-214ENST00000513996 E9PCH4 1651 aa13.2□□□□□ -0.3
HERC4-214ENST00000513996 IQGAP1P46940 1657 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms