RNA–Protein interactions for RNA: ENST00000513913.5

GRAMD2B-213, Transcript of GRAM domain containing 2B, humanhuman

TSL 4

Gene GRAMD2B, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-213ENST00000513913 DAPK1P53355 1430 aa36.9■■■■□ 3.5
GRAMD2B-213ENST00000513913 DNMT1P26358 1616 aaKnown RBP36.89■■■■□ 3.5
GRAMD2B-213ENST00000513913 RRP7BPQ9NSQ0 103 aa36.89■■■■□ 3.5
GRAMD2B-213ENST00000513913 CHIC2Q9UKJ5 165 aa36.89■■■■□ 3.5
GRAMD2B-213ENST00000513913 KDM5DQ9BY66 1539 aa36.86■■■■□ 3.49
GRAMD2B-213ENST00000513913 FAM50AQ14320 339 aaKnown RBP36.86■■■■□ 3.49
GRAMD2B-213ENST00000513913 FBXO31Q5XUX0 539 aaPredicted RBP36.85■■■■□ 3.49
GRAMD2B-213ENST00000513913 SHANK2Q9UPX8 1470 aa36.83■■■■□ 3.49
GRAMD2B-213ENST00000513913 MYO3AQ8NEV4 1616 aa36.83■■■■□ 3.49
GRAMD2B-213ENST00000513913 KIF15Q9NS87 1388 aa36.82■■■■□ 3.49
GRAMD2B-213ENST00000513913 DUOX2Q9NRD8 1548 aa36.82■■■■□ 3.48
GRAMD2B-213ENST00000513913 RNF17Q9BXT8 1623 aaKnown RBP36.81■■■■□ 3.48
GRAMD2B-213ENST00000513913 EIF2AK4Q9P2K8 1649 aaKnown RBP36.81■■■■□ 3.48
GRAMD2B-213ENST00000513913 CAMSAP1Q5T5Y3 1602 aa36.76■■■■□ 3.48
GRAMD2B-213ENST00000513913 FAM135AQ9P2D6 1515 aa36.74■■■■□ 3.47
GRAMD2B-213ENST00000513913 MROH1Q8NDA8 1641 aa36.74■■■■□ 3.47
GRAMD2B-213ENST00000513913 PZPP20742 1482 aa36.73■■■■□ 3.47
GRAMD2B-213ENST00000513913 CEP170BQ9Y4F5 1589 aaPredicted RBP36.73■■■■□ 3.47
GRAMD2B-213ENST00000513913 ZNF142P52746 1687 aaPredicted RBP36.73■■■■□ 3.47
GRAMD2B-213ENST00000513913 CEP152O94986 1710 aa36.73■■■■□ 3.47
GRAMD2B-213ENST00000513913 CFAP65Q6ZU64 1925 aaKnown RBP36.72■■■■□ 3.47
GRAMD2B-213ENST00000513913 DMRT2Q9Y5R5 561 aa36.72■■■■□ 3.47
GRAMD2B-213ENST00000513913 ABCC3O15438 1527 aa36.71■■■■□ 3.47
GRAMD2B-213ENST00000513913 NCOA1Q15788 1441 aa36.69■■■■□ 3.46
GRAMD2B-213ENST00000513913 TNRQ92752 1358 aa36.69■■■■□ 3.46
GRAMD2B-213ENST00000513913 ANKRD30AQ9BXX3 1397 aa36.69■■■■□ 3.46
GRAMD2B-213ENST00000513913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.69■■■■□ 3.46
GRAMD2B-213ENST00000513913 NCKAP5LQ9HCH0 1330 aa36.68■■■■□ 3.46
GRAMD2B-213ENST00000513913 ZC3H13Q5T200 1668 aaKnown RBP36.67■■■■□ 3.46
GRAMD2B-213ENST00000513913 ERBINQ96RT1 1412 aa36.67■■■■□ 3.46
GRAMD2B-213ENST00000513913 A2ML1A8K2U0 1454 aa36.62■■■■□ 3.45
GRAMD2B-213ENST00000513913 PTPRTO14522 1441 aa36.59■■■■□ 3.45
GRAMD2B-213ENST00000513913 FBXO41Q8TF61 875 aa36.58■■■■□ 3.45
GRAMD2B-213ENST00000513913 CERKQ8TCT0 537 aa36.57■■■■□ 3.44
GRAMD2B-213ENST00000513913 PRDM15P57071 1507 aaPredicted RBP36.57■■■■□ 3.44
GRAMD2B-213ENST00000513913 ADGRL2O95490 1459 aa36.56■■■■□ 3.44
GRAMD2B-213ENST00000513913 ITGAEP38570 1179 aa36.55■■■■□ 3.44
GRAMD2B-213ENST00000513913 DEPDC5O75140 1603 aa36.55■■■■□ 3.44
GRAMD2B-213ENST00000513913 PLA2R1Q13018 1463 aa36.52■■■■□ 3.44
GRAMD2B-213ENST00000513913 ERVK-7P63135 1459 aa36.5■■■■□ 3.43
GRAMD2B-213ENST00000513913 SPATA31D1Q6ZQQ2 1576 aa36.5■■■■□ 3.43
GRAMD2B-213ENST00000513913 KANK1Q14678 1352 aa36.5■■■■□ 3.43
GRAMD2B-213ENST00000513913 PKD2Q13563 968 aa36.49■■■■□ 3.43
GRAMD2B-213ENST00000513913 NLRP1Q9C000 1473 aa36.47■■■■□ 3.43
GRAMD2B-213ENST00000513913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.46■■■■□ 3.43
GRAMD2B-213ENST00000513913 UGGT1Q9NYU2 1555 aa36.45■■■■□ 3.43
GRAMD2B-213ENST00000513913 ANKRD50Q9ULJ7 1429 aa36.44■■■■□ 3.42
GRAMD2B-213ENST00000513913 THEMISQ8N1K5 641 aaPredicted RBP36.42■■■■□ 3.42
GRAMD2B-213ENST00000513913 POLR1AO95602 1720 aaPredicted RBP36.41■■■■□ 3.42
GRAMD2B-213ENST00000513913 ARHGAP31Q2M1Z3 1444 aa36.39■■■■□ 3.42
GRAMD2B-213ENST00000513913 VWDEQ8N2E2 1590 aa36.39■■■■□ 3.42
GRAMD2B-213ENST00000513913 LTBP4Q8N2S1 1624 aa36.37■■■■□ 3.41
GRAMD2B-213ENST00000513913 ZNF335Q9H4Z2 1342 aaPredicted RBP36.36■■■■□ 3.41
GRAMD2B-213ENST00000513913 ANKLE2Q86XL3 938 aa36.35■■■■□ 3.41
GRAMD2B-213ENST00000513913 LMTK2Q8IWU2 1503 aa36.34■■■■□ 3.41
GRAMD2B-213ENST00000513913 NEURL4Q96JN8 1562 aa36.33■■■■□ 3.41
GRAMD2B-213ENST00000513913 UBR1Q8IWV7 1749 aa36.31■■■■□ 3.4
GRAMD2B-213ENST00000513913 ROCK1Q13464 1354 aa36.31■■■■□ 3.4
GRAMD2B-213ENST00000513913 EFCAB6Q5THR3 1501 aa36.27■■■■□ 3.4
GRAMD2B-213ENST00000513913 PIK3C2BO00750 1634 aa36.25■■■■□ 3.39
GRAMD2B-213ENST00000513913 RRBP1Q9P2E9 1410 aaKnown RBP36.23■■■■□ 3.39
GRAMD2B-213ENST00000513913 UNC13BO14795 1591 aa36.22■■■■□ 3.39
GRAMD2B-213ENST00000513913 SYNMO15061 1565 aa36.21■■■■□ 3.39
GRAMD2B-213ENST00000513913 NPHP4O75161 1426 aaPredicted RBP36.21■■■■□ 3.39
GRAMD2B-213ENST00000513913 IDI1Q13907 227 aa36.2■■■■□ 3.39
GRAMD2B-213ENST00000513913 STAG3Q9UJ98 1225 aa36.2■■■■□ 3.39
GRAMD2B-213ENST00000513913 TET3O43151 1660 aa36.18■■■■□ 3.38
GRAMD2B-213ENST00000513913 IQGAP1P46940 1657 aa36.16■■■■□ 3.38
GRAMD2B-213ENST00000513913 NOS1P29475 1434 aa36.16■■■■□ 3.38
GRAMD2B-213ENST00000513913 MED14O60244 1454 aa36.15■■■■□ 3.38
GRAMD2B-213ENST00000513913 GCC2Q8IWJ2 1684 aa36.14■■■■□ 3.38
GRAMD2B-213ENST00000513913 LTKP29376 864 aa36.14■■■■□ 3.38
GRAMD2B-213ENST00000513913 TXNDC2Q86VQ3 553 aa36.13■■■■□ 3.37
GRAMD2B-213ENST00000513913 NUP155O75694 1391 aa36.11■■■■□ 3.37
GRAMD2B-213ENST00000513913 IQGAP3Q86VI3 1631 aa36.09■■■■□ 3.37
GRAMD2B-213ENST00000513913 E9PCH4 1651 aa36.09■■■■□ 3.37
GRAMD2B-213ENST00000513913 SCAF11Q99590 1463 aaKnown RBP36.08■■■■□ 3.37
GRAMD2B-213ENST00000513913 ARHGAP23Q9P227 1491 aa36.08■■■■□ 3.37
GRAMD2B-213ENST00000513913 SLIT1O75093 1534 aa36.08■■■■□ 3.37
GRAMD2B-213ENST00000513913 RPRD2Q5VT52 1461 aaKnown RBP36.07■■■■□ 3.37
GRAMD2B-213ENST00000513913 EID1Q9Y6B2 187 aa36.05■■■■□ 3.36
GRAMD2B-213ENST00000513913 IQSEC2Q5JU85 1478 aa36.05■■■■□ 3.36
GRAMD2B-213ENST00000513913 TMEM2Q9UHN6 1383 aa36.04■■■■□ 3.36
GRAMD2B-213ENST00000513913 SLC52A1Q9NWF4 448 aa36.04■■■■□ 3.36
GRAMD2B-213ENST00000513913 MYO5BQ9ULV0 1848 aa36.04■■■■□ 3.36
GRAMD2B-213ENST00000513913 KDM5AP29375 1690 aaKnown RBP36.01■■■■□ 3.36
GRAMD2B-213ENST00000513913 ADGRB3O60242 1522 aa36■■■■□ 3.35
GRAMD2B-213ENST00000513913 STRCP1A6NGW2 1772 aa35.99■■■■□ 3.35
GRAMD2B-213ENST00000513913 SENP3Q9H4L4 574 aaPredicted RBP35.99■■■■□ 3.35
GRAMD2B-213ENST00000513913 UBAP1LF5GYI3 381 aa35.98■■■■□ 3.35
GRAMD2B-213ENST00000513913 NAIPQ13075 1403 aa35.98■■■■□ 3.35
GRAMD2B-213ENST00000513913 CHGAP10645 457 aaKnown RBP35.97■■■■□ 3.35
GRAMD2B-213ENST00000513913 CPS1P31327 1500 aa35.97■■■■□ 3.35
GRAMD2B-213ENST00000513913 TMEM131LA2VDJ0 1609 aa35.9■■■■□ 3.34
GRAMD2B-213ENST00000513913 BCANQ96GW7 911 aa35.87■■■■□ 3.33
GRAMD2B-213ENST00000513913 SLC26A8Q96RN1 970 aa35.87■■■■□ 3.33
GRAMD2B-213ENST00000513913 TRIM52Q96A61 297 aa35.86■■■■□ 3.33
GRAMD2B-213ENST00000513913 HFM1A2PYH4 1435 aa35.83■■■■□ 3.33
GRAMD2B-213ENST00000513913 NUTM2DQ5VT03 806 aaPredicted RBP35.83■■■■□ 3.33
GRAMD2B-213ENST00000513913 SPHKAPQ2M3C7 1700 aa35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms