RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 DHX29Q7Z478 1369 aaKnown RBP14.89□□□□□ -0.03
TOPBP1-209ENST00000513818 FER1L4A9Z1Z3 1794 aa14.89□□□□□ -0.03
TOPBP1-209ENST00000513818 EIF2AK4Q9P2K8 1649 aaKnown RBP14.88□□□□□ -0.03
TOPBP1-209ENST00000513818 RIMS1Q86UR5 1692 aaKnown RBP14.88□□□□□ -0.03
TOPBP1-209ENST00000513818 GCC2Q8IWJ2 1684 aa14.87□□□□□ -0.03
TOPBP1-209ENST00000513818 ROCK1Q13464 1354 aa14.86□□□□□ -0.03
TOPBP1-209ENST00000513818 ERBINQ96RT1 1412 aa14.86□□□□□ -0.03
TOPBP1-209ENST00000513818 MROH1Q8NDA8 1641 aa14.86□□□□□ -0.03
TOPBP1-209ENST00000513818 RNF17Q9BXT8 1623 aaKnown RBP14.86□□□□□ -0.03
TOPBP1-209ENST00000513818 KDM4FA0A1W2PPD8 638 aa14.86□□□□□ -0.03
TOPBP1-209ENST00000513818 KIF3BO15066 747 aa14.86□□□□□ -0.03
TOPBP1-209ENST00000513818 ANKRD50Q9ULJ7 1429 aa14.84□□□□□ -0.03
TOPBP1-209ENST00000513818 CLTCQ00610 1675 aaKnown RBP14.84□□□□□ -0.03
TOPBP1-209ENST00000513818 KCNA4P22459 653 aa14.84□□□□□ -0.03
TOPBP1-209ENST00000513818 GGT6Q6P531 493 aa14.84□□□□□ -0.03
TOPBP1-209ENST00000513818 NAIPQ13075 1403 aa14.83□□□□□ -0.03
TOPBP1-209ENST00000513818 DEPDC5O75140 1603 aa14.83□□□□□ -0.04
TOPBP1-209ENST00000513818 CEP152O94986 1710 aa14.83□□□□□ -0.04
TOPBP1-209ENST00000513818 PRDM15P57071 1507 aaPredicted RBP14.81□□□□□ -0.04
TOPBP1-209ENST00000513818 HFM1A2PYH4 1435 aa14.8□□□□□ -0.04
TOPBP1-209ENST00000513818 UNC13BO14795 1591 aa14.8□□□□□ -0.04
TOPBP1-209ENST00000513818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.79□□□□□ -0.04
TOPBP1-209ENST00000513818 KDM5DQ9BY66 1539 aa14.79□□□□□ -0.04
TOPBP1-209ENST00000513818 ABCC3O15438 1527 aa14.78□□□□□ -0.04
TOPBP1-209ENST00000513818 PTPRMP28827 1452 aa14.78□□□□□ -0.04
TOPBP1-209ENST00000513818 SCAF1Q9H7N4 1312 aaKnown RBP14.78□□□□□ -0.04
TOPBP1-209ENST00000513818 C3P01024 1663 aa14.77□□□□□ -0.04
TOPBP1-209ENST00000513818 ZC3H13Q5T200 1668 aaKnown RBP14.77□□□□□ -0.05
TOPBP1-209ENST00000513818 PPP4R3CPQ6ZMV5 832 aa14.76□□□□□ -0.05
TOPBP1-209ENST00000513818 MROH2AA6NES4 1674 aa14.76□□□□□ -0.05
TOPBP1-209ENST00000513818 CAMSAP1Q5T5Y3 1602 aa14.76□□□□□ -0.05
TOPBP1-209ENST00000513818 VWDEQ8N2E2 1590 aa14.74□□□□□ -0.05
TOPBP1-209ENST00000513818 CEBPAP49715 358 aaPredicted RBP14.74□□□□□ -0.05
TOPBP1-209ENST00000513818 ESF1Q9H501 851 aaKnown RBP14.74□□□□□ -0.05
TOPBP1-209ENST00000513818 CNTLNQ9NXG0 1405 aa14.73□□□□□ -0.05
TOPBP1-209ENST00000513818 IQGAP3Q86VI3 1631 aa14.73□□□□□ -0.05
TOPBP1-209ENST00000513818 FAM135AQ9P2D6 1515 aa14.72□□□□□ -0.05
TOPBP1-209ENST00000513818 WASHC2CQ9Y4E1 1318 aa14.72□□□□□ -0.05
TOPBP1-209ENST00000513818 TRIM26Q12899 539 aaPredicted RBP14.71□□□□□ -0.05
TOPBP1-209ENST00000513818 SETD5Q9C0A6 1442 aa14.71□□□□□ -0.05
TOPBP1-209ENST00000513818 KANK1Q14678 1352 aa14.71□□□□□ -0.06
TOPBP1-209ENST00000513818 RAB3GAP2Q9H2M9 1393 aa14.71□□□□□ -0.06
TOPBP1-209ENST00000513818 EFCAB6Q5THR3 1501 aa14.7□□□□□ -0.06
TOPBP1-209ENST00000513818 TET3O43151 1660 aa14.69□□□□□ -0.06
TOPBP1-209ENST00000513818 LMTK2Q8IWU2 1503 aa14.69□□□□□ -0.06
TOPBP1-209ENST00000513818 NUP155O75694 1391 aa14.69□□□□□ -0.06
TOPBP1-209ENST00000513818 ZMYM3Q14202 1370 aa14.69□□□□□ -0.06
TOPBP1-209ENST00000513818 PZPP20742 1482 aa14.68□□□□□ -0.06
TOPBP1-209ENST00000513818 CFAP65Q6ZU64 1925 aaKnown RBP14.67□□□□□ -0.06
TOPBP1-209ENST00000513818 TRIM52Q96A61 297 aa14.67□□□□□ -0.06
TOPBP1-209ENST00000513818 E9PCH4 1651 aa14.67□□□□□ -0.06
TOPBP1-209ENST00000513818 NPATQ14207 1427 aa14.66□□□□□ -0.06
TOPBP1-209ENST00000513818 PREX1Q8TCU6 1659 aa14.66□□□□□ -0.06
TOPBP1-209ENST00000513818 FBXO31Q5XUX0 539 aaPredicted RBP14.65□□□□□ -0.06
TOPBP1-209ENST00000513818 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
TOPBP1-209ENST00000513818 MYO3AQ8NEV4 1616 aa14.65□□□□□ -0.06
TOPBP1-209ENST00000513818 ERVK-7P63135 1459 aa14.64□□□□□ -0.07
TOPBP1-209ENST00000513818 SPATA31D1Q6ZQQ2 1576 aa14.63□□□□□ -0.07
TOPBP1-209ENST00000513818 SYNMO15061 1565 aa14.62□□□□□ -0.07
TOPBP1-209ENST00000513818 ARHGAP31Q2M1Z3 1444 aa14.61□□□□□ -0.07
TOPBP1-209ENST00000513818 PCGF6Q9BYE7 350 aa14.6□□□□□ -0.07
TOPBP1-209ENST00000513818 UGGT1Q9NYU2 1555 aa14.6□□□□□ -0.07
TOPBP1-209ENST00000513818 TNRQ92752 1358 aa14.6□□□□□ -0.07
TOPBP1-209ENST00000513818 SPHKAPQ2M3C7 1700 aa14.59□□□□□ -0.07
TOPBP1-209ENST00000513818 LMTK3Q96Q04 1460 aa14.58□□□□□ -0.08
TOPBP1-209ENST00000513818 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
TOPBP1-209ENST00000513818 RPRD2Q5VT52 1461 aaKnown RBP14.57□□□□□ -0.08
TOPBP1-209ENST00000513818 CEP170BQ9Y4F5 1589 aaPredicted RBP14.57□□□□□ -0.08
TOPBP1-209ENST00000513818 ZNF142P52746 1687 aaPredicted RBP14.57□□□□□ -0.08
TOPBP1-209ENST00000513818 NOS1P29475 1434 aa14.57□□□□□ -0.08
TOPBP1-209ENST00000513818 UHRF1BP1Q6BDS2 1440 aa14.57□□□□□ -0.08
TOPBP1-209ENST00000513818 PKD2Q13563 968 aa14.56□□□□□ -0.08
TOPBP1-209ENST00000513818 PIK3C2BO00750 1634 aa14.55□□□□□ -0.08
TOPBP1-209ENST00000513818 MPHOSPH9Q99550 1183 aa14.55□□□□□ -0.08
TOPBP1-209ENST00000513818 CLTCL1P53675 1640 aa14.53□□□□□ -0.08
TOPBP1-209ENST00000513818 HSPA2P54652 639 aa14.53□□□□□ -0.08
TOPBP1-209ENST00000513818 TRPM2O94759 1503 aa14.52□□□□□ -0.08
TOPBP1-209ENST00000513818 A2ML1A8K2U0 1454 aa14.52□□□□□ -0.08
TOPBP1-209ENST00000513818 SETD1BQ9UPS6 1966 aaKnown RBP14.52□□□□□ -0.09
TOPBP1-209ENST00000513818 UBR1Q8IWV7 1749 aa14.52□□□□□ -0.09
TOPBP1-209ENST00000513818 PLA2R1Q13018 1463 aa14.51□□□□□ -0.09
TOPBP1-209ENST00000513818 NLRP1Q9C000 1473 aa14.51□□□□□ -0.09
TOPBP1-209ENST00000513818 MYO5BQ9ULV0 1848 aa14.51□□□□□ -0.09
TOPBP1-209ENST00000513818 ADGRB3O60242 1522 aa14.51□□□□□ -0.09
TOPBP1-209ENST00000513818 PTPRTO14522 1441 aa14.49□□□□□ -0.09
TOPBP1-209ENST00000513818 HRCP23327 699 aa14.48□□□□□ -0.09
TOPBP1-209ENST00000513818 IDI1Q13907 227 aa14.47□□□□□ -0.09
TOPBP1-209ENST00000513818 TMEM131LA2VDJ0 1609 aa14.47□□□□□ -0.09
TOPBP1-209ENST00000513818 CHGAP10645 457 aaKnown RBP14.46□□□□□ -0.09
TOPBP1-209ENST00000513818 DHX57Q6P158 1386 aaKnown RBP14.46□□□□□ -0.1
TOPBP1-209ENST00000513818 KIF1BO60333 1816 aa14.44□□□□□ -0.1
TOPBP1-209ENST00000513818 ACIN1Q9UKV3 1341 aaKnown RBP14.43□□□□□ -0.1
TOPBP1-209ENST00000513818 STRCQ7RTU9 1775 aa14.43□□□□□ -0.1
TOPBP1-209ENST00000513818 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
TOPBP1-209ENST00000513818 POLR1AO95602 1720 aaPredicted RBP14.43□□□□□ -0.1
TOPBP1-209ENST00000513818 KDM5AP29375 1690 aaKnown RBP14.42□□□□□ -0.1
TOPBP1-209ENST00000513818 CCDC144AA2RUR9 1427 aa14.42□□□□□ -0.1
TOPBP1-209ENST00000513818 SLC52A1Q9NWF4 448 aa14.42□□□□□ -0.1
TOPBP1-209ENST00000513818 ANKRD30BQ9BXX2 1392 aa14.41□□□□□ -0.1
TOPBP1-209ENST00000513818 NEURL4Q96JN8 1562 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms