RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 TRAPPC8Q9Y2L5 1435 aa15.04■□□□□ -0
CDK7-210ENST00000513629 HSPA2P54652 639 aa15.04■□□□□ -0
CDK7-210ENST00000513629 CDC42BPAQ5VT25 1732 aa15.03■□□□□ -0
CDK7-210ENST00000513629 PKD2Q13563 968 aa15.03■□□□□ -0
CDK7-210ENST00000513629 MLH3Q9UHC1 1453 aa15.02■□□□□ -0
CDK7-210ENST00000513629 REREQ9P2R6 1566 aa15.02□□□□□ -0.01
CDK7-210ENST00000513629 CHRDL2Q6WN34 429 aa15□□□□□ -0.01
CDK7-210ENST00000513629 SAMD9LQ8IVG5 1584 aa14.99□□□□□ -0.01
CDK7-210ENST00000513629 CHADLQ6NUI6 762 aa14.99□□□□□ -0.01
CDK7-210ENST00000513629 SYCP2Q9BX26 1530 aa14.98□□□□□ -0.01
CDK7-210ENST00000513629 GPATCH8Q9UKJ3 1502 aaKnown RBP14.98□□□□□ -0.01
CDK7-210ENST00000513629 CEBPAP49715 358 aaPredicted RBP14.98□□□□□ -0.01
CDK7-210ENST00000513629 ZNF777Q9ULD5 760 aaPredicted RBP14.98□□□□□ -0.01
CDK7-210ENST00000513629 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.01
CDK7-210ENST00000513629 KIDINS220Q9ULH0 1771 aa14.97□□□□□ -0.01
CDK7-210ENST00000513629 AGLP35573 1532 aa14.97□□□□□ -0.01
CDK7-210ENST00000513629 PREX1Q8TCU6 1659 aa14.97□□□□□ -0.01
CDK7-210ENST00000513629 NUBP1P53384 320 aa14.96□□□□□ -0.01
CDK7-210ENST00000513629 FBXO41Q8TF61 875 aa14.96□□□□□ -0.01
CDK7-210ENST00000513629 MTUS2Q5JR59 1369 aa14.95□□□□□ -0.02
CDK7-210ENST00000513629 CEP162Q5TB80 1403 aa14.93□□□□□ -0.02
CDK7-210ENST00000513629 CCNB3Q8WWL7 1395 aa14.93□□□□□ -0.02
CDK7-210ENST00000513629 UHRF1BP1Q6BDS2 1440 aa14.92□□□□□ -0.02
CDK7-210ENST00000513629 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
CDK7-210ENST00000513629 CFDP1Q9UEE9 299 aaPredicted RBP14.92□□□□□ -0.02
CDK7-210ENST00000513629 EHBP1L1Q8N3D4 1523 aa14.92□□□□□ -0.02
CDK7-210ENST00000513629 SPAG9O60271 1321 aaKnown RBP14.92□□□□□ -0.02
CDK7-210ENST00000513629 C3P01024 1663 aa14.91□□□□□ -0.02
CDK7-210ENST00000513629 PLEKHH2Q8IVE3 1493 aa14.91□□□□□ -0.02
CDK7-210ENST00000513629 HNRNPMP52272 730 aaKnown RBP eCLIP14.91□□□□□ -0.022e-9■■■■■ 32.2
CDK7-210ENST00000513629 CIZ1Q9ULV3 898 aaPredicted RBP14.91□□□□□ -0.02
CDK7-210ENST00000513629 ATP7AQ04656 1500 aa14.91□□□□□ -0.02
CDK7-210ENST00000513629 KIAA1107Q9UPP5 1409 aa14.91□□□□□ -0.02
CDK7-210ENST00000513629 TIAM1Q13009 1591 aa14.9□□□□□ -0.02
CDK7-210ENST00000513629 ESF1Q9H501 851 aaKnown RBP14.9□□□□□ -0.02
CDK7-210ENST00000513629 INO80Q9ULG1 1556 aaPredicted RBP14.9□□□□□ -0.02
CDK7-210ENST00000513629 PIP4P2Q8N4L2 257 aa14.89□□□□□ -0.03
CDK7-210ENST00000513629 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
CDK7-210ENST00000513629 PLXNC1O60486 1568 aa14.87□□□□□ -0.03
CDK7-210ENST00000513629 ECM2O94769 699 aaPredicted RBP14.87□□□□□ -0.03
CDK7-210ENST00000513629 SUPT6HQ7KZ85 1726 aaKnown RBP14.86□□□□□ -0.03
CDK7-210ENST00000513629 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
CDK7-210ENST00000513629 A2MP01023 1474 aa14.85□□□□□ -0.03
CDK7-210ENST00000513629 ZNF644Q9H582 1327 aaPredicted RBP14.85□□□□□ -0.03
CDK7-210ENST00000513629 STRCQ7RTU9 1775 aa14.85□□□□□ -0.03
CDK7-210ENST00000513629 SETD1BQ9UPS6 1966 aaKnown RBP14.84□□□□□ -0.03
CDK7-210ENST00000513629 MROH2AA6NES4 1674 aa14.84□□□□□ -0.03
CDK7-210ENST00000513629 GSE1Q14687 1217 aa14.83□□□□□ -0.04
CDK7-210ENST00000513629 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
CDK7-210ENST00000513629 CERKQ8TCT0 537 aa14.83□□□□□ -0.04
CDK7-210ENST00000513629 MBD5Q9P267 1494 aa14.82□□□□□ -0.04
CDK7-210ENST00000513629 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
CDK7-210ENST00000513629 NCOA2Q15596 1464 aa14.82□□□□□ -0.04
CDK7-210ENST00000513629 ZMYM3Q14202 1370 aa14.81□□□□□ -0.04
CDK7-210ENST00000513629 NPATQ14207 1427 aa14.81□□□□□ -0.04
CDK7-210ENST00000513629 CLTCQ00610 1675 aaKnown RBP14.81□□□□□ -0.04
CDK7-210ENST00000513629 ADGBQ8N7X0 1667 aa14.81□□□□□ -0.04
CDK7-210ENST00000513629 DCAF8Q5TAQ9 597 aa14.8□□□□□ -0.04
CDK7-210ENST00000513629 CAMSAP2Q08AD1 1489 aa14.79□□□□□ -0.04
CDK7-210ENST00000513629 CCDC141Q6ZP82 1450 aa14.78□□□□□ -0.04
CDK7-210ENST00000513629 NCOA1Q15788 1441 aa14.78□□□□□ -0.04
CDK7-210ENST00000513629 GGT6Q6P531 493 aa14.78□□□□□ -0.04
CDK7-210ENST00000513629 VPS8Q8N3P4 1428 aa14.77□□□□□ -0.04
CDK7-210ENST00000513629 RTEL1-TNFRSF6BF6WH68 1400 aa14.76□□□□□ -0.05
CDK7-210ENST00000513629 PTPRTO14522 1441 aa14.76□□□□□ -0.05
CDK7-210ENST00000513629 MYO3AQ8NEV4 1616 aa14.76□□□□□ -0.05
CDK7-210ENST00000513629 CAMSAP1Q5T5Y3 1602 aa14.75□□□□□ -0.05
CDK7-210ENST00000513629 LOC105371045A0A1W2PR82 267 aa14.75□□□□□ -0.05
CDK7-210ENST00000513629 PTPRKQ15262 1439 aa14.75□□□□□ -0.05
CDK7-210ENST00000513629 RGL2O15211 777 aa14.74□□□□□ -0.05
CDK7-210ENST00000513629 ZNF142P52746 1687 aaPredicted RBP14.74□□□□□ -0.05
CDK7-210ENST00000513629 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
CDK7-210ENST00000513629 LRRC9Q6ZRR7 1453 aa14.73□□□□□ -0.05
CDK7-210ENST00000513629 CEP170BQ9Y4F5 1589 aaPredicted RBP14.73□□□□□ -0.05
CDK7-210ENST00000513629 ARHGEF5Q12774 1597 aa14.71□□□□□ -0.05
CDK7-210ENST00000513629 KDM5DQ9BY66 1539 aa14.7□□□□□ -0.06
CDK7-210ENST00000513629 LTBP4Q8N2S1 1624 aa14.7□□□□□ -0.06
CDK7-210ENST00000513629 KIF3BO15066 747 aa14.69□□□□□ -0.06
CDK7-210ENST00000513629 PLA2R1Q13018 1463 aa14.69□□□□□ -0.06
CDK7-210ENST00000513629 NCKAP5LQ9HCH0 1330 aa14.68□□□□□ -0.06
CDK7-210ENST00000513629 RSPH4AQ5TD94 716 aa14.68□□□□□ -0.06
CDK7-210ENST00000513629 TSPYL2Q9H2G4 693 aaPredicted RBP14.67□□□□□ -0.06
CDK7-210ENST00000513629 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
CDK7-210ENST00000513629 FAM135AQ9P2D6 1515 aa14.66□□□□□ -0.06
CDK7-210ENST00000513629 TCOF1Q13428 1488 aaKnown RBP14.66□□□□□ -0.06
CDK7-210ENST00000513629 KANK4Q5T7N3 995 aaPredicted RBP14.66□□□□□ -0.06
CDK7-210ENST00000513629 A2ML1A8K2U0 1454 aa14.65□□□□□ -0.06
CDK7-210ENST00000513629 PZPP20742 1482 aa14.65□□□□□ -0.06
CDK7-210ENST00000513629 TSPY4P0CV99 314 aa14.65□□□□□ -0.06
CDK7-210ENST00000513629 TSPY10P0CW01 314 aa14.65□□□□□ -0.06
CDK7-210ENST00000513629 TNRQ92752 1358 aa14.64□□□□□ -0.07
CDK7-210ENST00000513629 MYOM3Q5VTT5 1437 aa14.64□□□□□ -0.07
CDK7-210ENST00000513629 MAST1Q9Y2H9 1570 aa14.64□□□□□ -0.07
CDK7-210ENST00000513629 WASHC2CQ9Y4E1 1318 aa14.64□□□□□ -0.07
CDK7-210ENST00000513629 DNMT1P26358 1616 aaKnown RBP14.63□□□□□ -0.07
CDK7-210ENST00000513629 FBXO31Q5XUX0 539 aaPredicted RBP14.63□□□□□ -0.07
CDK7-210ENST00000513629 RNF25Q96BH1 459 aaPredicted RBP14.63□□□□□ -0.07
CDK7-210ENST00000513629 ZNF335Q9H4Z2 1342 aaPredicted RBP14.63□□□□□ -0.07
CDK7-210ENST00000513629 IQSEC2Q5JU85 1478 aa14.63□□□□□ -0.07
CDK7-210ENST00000513629 MIA2Q96PC5 1412 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms