RNA–Protein interactions for RNA: ENST00000513609.1

CSF1R-206, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 5

Gene CSF1R, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-206ENST00000513609 CLTCQ00610 1675 aaKnown RBP20.83■□□□□ 0.92
CSF1R-206ENST00000513609 MROH2AA6NES4 1674 aa20.82■□□□□ 0.92
CSF1R-206ENST00000513609 LRRC9Q6ZRR7 1453 aa20.81■□□□□ 0.92
CSF1R-206ENST00000513609 PLA2R1Q13018 1463 aa20.79■□□□□ 0.92
CSF1R-206ENST00000513609 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
CSF1R-206ENST00000513609 ADGBQ8N7X0 1667 aa20.78■□□□□ 0.92
CSF1R-206ENST00000513609 A2ML1A8K2U0 1454 aa20.78■□□□□ 0.92
CSF1R-206ENST00000513609 LTBP4Q8N2S1 1624 aa20.77■□□□□ 0.92
CSF1R-206ENST00000513609 MIA2Q96PC5 1412 aa20.77■□□□□ 0.91
CSF1R-206ENST00000513609 CEP170BQ9Y4F5 1589 aaPredicted RBP20.76■□□□□ 0.91
CSF1R-206ENST00000513609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.75■□□□□ 0.91
CSF1R-206ENST00000513609 PIP4K2BP78356 416 aa20.74■□□□□ 0.91
CSF1R-206ENST00000513609 RRP7BPQ9NSQ0 103 aa20.74■□□□□ 0.91
CSF1R-206ENST00000513609 TCOF1Q13428 1488 aaKnown RBP20.74■□□□□ 0.91
CSF1R-206ENST00000513609 IQSEC2Q5JU85 1478 aa20.74■□□□□ 0.91
CSF1R-206ENST00000513609 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
CSF1R-206ENST00000513609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.73■□□□□ 0.91
CSF1R-206ENST00000513609 PZPP20742 1482 aa20.73■□□□□ 0.91
CSF1R-206ENST00000513609 TOM1O60784 492 aa20.72■□□□□ 0.91
CSF1R-206ENST00000513609 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
CSF1R-206ENST00000513609 MYOM3Q5VTT5 1437 aa20.71■□□□□ 0.91
CSF1R-206ENST00000513609 ILDR2Q71H61 639 aa20.69■□□□□ 0.9
CSF1R-206ENST00000513609 ARHGEF5Q12774 1597 aa20.68■□□□□ 0.9
CSF1R-206ENST00000513609 FAM135AQ9P2D6 1515 aa20.68■□□□□ 0.9
CSF1R-206ENST00000513609 NLRP1Q9C000 1473 aa20.67■□□□□ 0.9
CSF1R-206ENST00000513609 STAG3Q9UJ98 1225 aa20.66■□□□□ 0.9
CSF1R-206ENST00000513609 CHIC2Q9UKJ5 165 aa20.66■□□□□ 0.9
CSF1R-206ENST00000513609 MAP3K1Q13233 1512 aa20.66■□□□□ 0.9
CSF1R-206ENST00000513609 DNMT1P26358 1616 aaKnown RBP20.65■□□□□ 0.9
CSF1R-206ENST00000513609 KIF15Q9NS87 1388 aa20.63■□□□□ 0.89
CSF1R-206ENST00000513609 ZNF142P52746 1687 aaPredicted RBP20.63■□□□□ 0.89
CSF1R-206ENST00000513609 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
CSF1R-206ENST00000513609 NPHP4O75161 1426 aaPredicted RBP20.62■□□□□ 0.89
CSF1R-206ENST00000513609 SOCS7O14512 581 aa20.62■□□□□ 0.89
CSF1R-206ENST00000513609 EID1Q9Y6B2 187 aa20.62■□□□□ 0.89
CSF1R-206ENST00000513609 SHANK2Q9UPX8 1470 aa20.62■□□□□ 0.89
CSF1R-206ENST00000513609 TXNDC2Q86VQ3 553 aa20.61■□□□□ 0.89
CSF1R-206ENST00000513609 KANK1Q14678 1352 aa20.6■□□□□ 0.89
CSF1R-206ENST00000513609 HSPA1LP34931 641 aa20.6■□□□□ 0.89
CSF1R-206ENST00000513609 FAM50AQ14320 339 aaKnown RBP20.59■□□□□ 0.89
CSF1R-206ENST00000513609 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.89
CSF1R-206ENST00000513609 ABCC5O15440 1437 aa20.58■□□□□ 0.88
CSF1R-206ENST00000513609 ABCC3O15438 1527 aa20.58■□□□□ 0.88
CSF1R-206ENST00000513609 DUOX2Q9NRD8 1548 aa20.57■□□□□ 0.88
CSF1R-206ENST00000513609 ANKRD30AQ9BXX3 1397 aa20.56■□□□□ 0.88
CSF1R-206ENST00000513609 CPS1P31327 1500 aa20.55■□□□□ 0.88
CSF1R-206ENST00000513609 ERVK-7P63135 1459 aa20.55■□□□□ 0.88
CSF1R-206ENST00000513609 MAST1Q9Y2H9 1570 aa20.55■□□□□ 0.88
CSF1R-206ENST00000513609 LTKP29376 864 aa20.52■□□□□ 0.88
CSF1R-206ENST00000513609 BCANQ96GW7 911 aa20.52■□□□□ 0.88
CSF1R-206ENST00000513609 DAPK1P53355 1430 aa20.52■□□□□ 0.87
CSF1R-206ENST00000513609 ERBINQ96RT1 1412 aa20.52■□□□□ 0.87
CSF1R-206ENST00000513609 MED14O60244 1454 aa20.51■□□□□ 0.87
CSF1R-206ENST00000513609 FGD6Q6ZV73 1430 aa20.51■□□□□ 0.87
CSF1R-206ENST00000513609 SPATA31D1Q6ZQQ2 1576 aa20.49■□□□□ 0.87
CSF1R-206ENST00000513609 NEURL4Q96JN8 1562 aa20.49■□□□□ 0.87
CSF1R-206ENST00000513609 RNF17Q9BXT8 1623 aaKnown RBP20.49■□□□□ 0.87
CSF1R-206ENST00000513609 IDI1Q13907 227 aa20.48■□□□□ 0.87
CSF1R-206ENST00000513609 ARHGAP31Q2M1Z3 1444 aa20.47■□□□□ 0.87
CSF1R-206ENST00000513609 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
CSF1R-206ENST00000513609 EIF2AK4Q9P2K8 1649 aaKnown RBP20.46■□□□□ 0.87
CSF1R-206ENST00000513609 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
CSF1R-206ENST00000513609 PTPN23Q9H3S7 1636 aa20.45■□□□□ 0.86
CSF1R-206ENST00000513609 ZC3H13Q5T200 1668 aaKnown RBP20.43■□□□□ 0.86
CSF1R-206ENST00000513609 TMEM2Q9UHN6 1383 aa20.43■□□□□ 0.86
CSF1R-206ENST00000513609 VWDEQ8N2E2 1590 aa20.42■□□□□ 0.86
CSF1R-206ENST00000513609 DEPDC5O75140 1603 aa20.42■□□□□ 0.86
CSF1R-206ENST00000513609 SLC26A8Q96RN1 970 aa20.42■□□□□ 0.86
CSF1R-206ENST00000513609 SLC52A1Q9NWF4 448 aa20.42■□□□□ 0.86
CSF1R-206ENST00000513609 POLR1AO95602 1720 aaPredicted RBP20.41■□□□□ 0.86
CSF1R-206ENST00000513609 HDGFP51858 240 aaKnown RBP20.4■□□□□ 0.86
CSF1R-206ENST00000513609 MROH1Q8NDA8 1641 aa20.4■□□□□ 0.86
CSF1R-206ENST00000513609 PPP1R15AO75807 674 aaPredicted RBP20.39■□□□□ 0.85
CSF1R-206ENST00000513609 PROSER2Q86WR7 435 aaPredicted RBP20.39■□□□□ 0.85
CSF1R-206ENST00000513609 LRRC7Q96NW7 1537 aa20.38■□□□□ 0.85
CSF1R-206ENST00000513609 CHGAP10645 457 aaKnown RBP20.38■□□□□ 0.85
CSF1R-206ENST00000513609 ITGAEP38570 1179 aa20.38■□□□□ 0.85
CSF1R-206ENST00000513609 PRDM15P57071 1507 aaPredicted RBP20.37■□□□□ 0.85
CSF1R-206ENST00000513609 KCNA6P17658 529 aa20.37■□□□□ 0.85
CSF1R-206ENST00000513609 IQGAP1P46940 1657 aa20.37■□□□□ 0.85
CSF1R-206ENST00000513609 RBM33Q96EV2 1170 aaKnown RBP20.35■□□□□ 0.85
CSF1R-206ENST00000513609 ARHGAP23Q9P227 1491 aa20.35■□□□□ 0.85
CSF1R-206ENST00000513609 ANKRD50Q9ULJ7 1429 aa20.35■□□□□ 0.85
CSF1R-206ENST00000513609 CEP152O94986 1710 aa20.33■□□□□ 0.85
CSF1R-206ENST00000513609 SLIT1O75093 1534 aa20.33■□□□□ 0.85
CSF1R-206ENST00000513609 PPARGC1BQ86YN6 1023 aaKnown RBP20.32■□□□□ 0.84
CSF1R-206ENST00000513609 EFCAB6Q5THR3 1501 aa20.3■□□□□ 0.84
CSF1R-206ENST00000513609 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
CSF1R-206ENST00000513609 LMTK2Q8IWU2 1503 aa20.29■□□□□ 0.84
CSF1R-206ENST00000513609 UBR1Q8IWV7 1749 aa20.29■□□□□ 0.84
CSF1R-206ENST00000513609 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.28■□□□□ 0.84
CSF1R-206ENST00000513609 NOS1P29475 1434 aa20.27■□□□□ 0.84
CSF1R-206ENST00000513609 ADGRL2O95490 1459 aa20.27■□□□□ 0.84
CSF1R-206ENST00000513609 C14orf37Q86TY3 774 aa20.27■□□□□ 0.84
CSF1R-206ENST00000513609 CFAP65Q6ZU64 1925 aaKnown RBP20.27■□□□□ 0.84
CSF1R-206ENST00000513609 CROCC2H7BZ55 1655 aa20.26■□□□□ 0.83
CSF1R-206ENST00000513609 NUTM2DQ5VT03 806 aaPredicted RBP20.26■□□□□ 0.83
CSF1R-206ENST00000513609 PIK3C2BO00750 1634 aa20.24■□□□□ 0.83
CSF1R-206ENST00000513609 MED1Q15648 1581 aaPredicted RBP20.23■□□□□ 0.83
CSF1R-206ENST00000513609 NUP155O75694 1391 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms