RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 TSR1Q2NL82 804 aaKnown RBP7.85□□□□□ -1.15
GYPB-214ENST00000513557 GIGYF2Q6Y7W6 1299 aaKnown RBP7.84□□□□□ -1.15
GYPB-214ENST00000513557 KDM4FA0A1W2PPD8 638 aa7.83□□□□□ -1.16
GYPB-214ENST00000513557 FOSBP53539 338 aa7.83□□□□□ -1.16
GYPB-214ENST00000513557 CLCN1P35523 988 aa7.82□□□□□ -1.16
GYPB-214ENST00000513557 ARXQ96QS3 562 aa7.82□□□□□ -1.16
GYPB-214ENST00000513557 MS4A1P11836 297 aa7.81□□□□□ -1.16
GYPB-214ENST00000513557 CERKQ8TCT0 537 aa7.81□□□□□ -1.16
GYPB-214ENST00000513557 REPIN1Q9BWE0 567 aaKnown RBP7.81□□□□□ -1.16
GYPB-214ENST00000513557 SUPT5HO00267 1087 aaKnown RBP7.8□□□□□ -1.16
GYPB-214ENST00000513557 MDM2Q00987 491 aaPredicted RBP7.8□□□□□ -1.16
GYPB-214ENST00000513557 DOK7Q18PE1 504 aa7.8□□□□□ -1.16
GYPB-214ENST00000513557 ZNF454Q8N9F8 522 aa7.8□□□□□ -1.16
GYPB-214ENST00000513557 ZDHHC16Q969W1 377 aa7.8□□□□□ -1.16
GYPB-214ENST00000513557 GOPCQ9HD26 462 aa7.8□□□□□ -1.16
GYPB-214ENST00000513557 GPCPD1Q9NPB8 672 aa7.8□□□□□ -1.16
GYPB-214ENST00000513557 RIMBP2O15034 1052 aa7.79□□□□□ -1.16
GYPB-214ENST00000513557 C6orf132Q5T0Z8 1188 aa7.79□□□□□ -1.16
GYPB-214ENST00000513557 OATP04181 439 aa7.78□□□□□ -1.16
GYPB-214ENST00000513557 NUDT7P0C024 238 aa7.78□□□□□ -1.16
GYPB-214ENST00000513557 ARSIQ5FYB1 569 aa7.78□□□□□ -1.16
GYPB-214ENST00000513557 PHOX2BQ99453 314 aa7.78□□□□□ -1.16
GYPB-214ENST00000513557 TMUB1Q9BVT8 246 aa7.78□□□□□ -1.16
GYPB-214ENST00000513557 HOXB3P14651 431 aaPredicted RBP7.77□□□□□ -1.17
GYPB-214ENST00000513557 FAM161AQ3B820 660 aa7.77□□□□□ -1.17
GYPB-214ENST00000513557 PADI6Q6TGC4 694 aa7.77□□□□□ -1.17
GYPB-214ENST00000513557 METTL3Q86U44 580 aaKnown RBP7.77□□□□□ -1.17
GYPB-214ENST00000513557 PCMTD1Q96MG8 357 aaPredicted RBP7.77□□□□□ -1.17
GYPB-214ENST00000513557 ZSWIM6Q9HCJ5 1215 aa7.77□□□□□ -1.17
GYPB-214ENST00000513557 SSTR3P32745 418 aaPredicted RBP7.76□□□□□ -1.17
GYPB-214ENST00000513557 KHSRPQ92945 711 aaKnown RBP eCLIP7.76□□□□□ -1.173e-6■■■□□ 17.7
GYPB-214ENST00000513557 ZMYND15Q9H091 742 aa7.76□□□□□ -1.17
GYPB-214ENST00000513557 RBM27Q9P2N5 1060 aaKnown RBP7.76□□□□□ -1.17
GYPB-214ENST00000513557 ADGRG1Q9Y653 693 aa7.76□□□□□ -1.17
GYPB-214ENST00000513557 ADAM33Q9BZ11 813 aa7.75□□□□□ -1.17
GYPB-214ENST00000513557 POTEJP0CG39 1038 aa7.74□□□□□ -1.17
GYPB-214ENST00000513557 SH3D19Q5HYK7 790 aa7.74□□□□□ -1.17
GYPB-214ENST00000513557 ZNF710Q8N1W2 664 aa7.74□□□□□ -1.17
GYPB-214ENST00000513557 PXYLP1Q8TE99 480 aa7.74□□□□□ -1.17
GYPB-214ENST00000513557 RSPH6AQ9H0K4 717 aa7.74□□□□□ -1.17
GYPB-214ENST00000513557 PRSS12P56730 875 aa7.73□□□□□ -1.17
GYPB-214ENST00000513557 FLIIQ13045 1269 aa7.73□□□□□ -1.17
GYPB-214ENST00000513557 GPR153Q6NV75 609 aa7.73□□□□□ -1.17
GYPB-214ENST00000513557 TTC13Q8NBP0 860 aa7.73□□□□□ -1.17
GYPB-214ENST00000513557 NLRP7Q8WX94 980 aa7.73□□□□□ -1.17
GYPB-214ENST00000513557 BEGAINQ9BUH8 593 aa7.73□□□□□ -1.17
GYPB-214ENST00000513557 SCUBE2Q9NQ36 999 aa7.73□□□□□ -1.17
GYPB-214ENST00000513557 MAMSTRQ6ZN01 415 aa7.72□□□□□ -1.17
GYPB-214ENST00000513557 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
GYPB-214ENST00000513557 CDCA7LQ96GN5 454 aa7.72□□□□□ -1.17
GYPB-214ENST00000513557 FAM217BQ9NTX9 383 aaPredicted RBP7.72□□□□□ -1.17
GYPB-214ENST00000513557 PPP4R3BQ5MIZ7 849 aa7.71□□□□□ -1.18
GYPB-214ENST00000513557 RBM46Q8TBY0 533 aaKnown RBP7.71□□□□□ -1.18
GYPB-214ENST00000513557 PSDA5PKW4 1024 aaPredicted RBP7.7□□□□□ -1.18
GYPB-214ENST00000513557 POTEB2H3BUK9 544 aa7.7□□□□□ -1.18
GYPB-214ENST00000513557 SKIV2LQ15477 1246 aaKnown RBP7.7□□□□□ -1.18
GYPB-214ENST00000513557 LHX6Q9UPM6 363 aa7.7□□□□□ -1.18
GYPB-214ENST00000513557 BCL2L12Q9HB09 334 aa7.68□□□□□ -1.18
GYPB-214ENST00000513557 ATP1B4Q9UN42 357 aaPredicted RBP7.68□□□□□ -1.18
GYPB-214ENST00000513557 ONECUT3O60422 494 aaPredicted RBP7.67□□□□□ -1.18
GYPB-214ENST00000513557 COL9A1P20849 921 aa7.67□□□□□ -1.18
GYPB-214ENST00000513557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.66□□□□□ -1.18
GYPB-214ENST00000513557 PPP1R3GB7ZBB8 358 aa7.66□□□□□ -1.18
GYPB-214ENST00000513557 PTPREP23469 700 aa7.66□□□□□ -1.18
GYPB-214ENST00000513557 POLR3EQ9NVU0 708 aa7.66□□□□□ -1.18
GYPB-214ENST00000513557 FAM198AQ9UFP1 575 aa7.66□□□□□ -1.18
GYPB-214ENST00000513557 RCCD1A6NED2 376 aa7.65□□□□□ -1.18
GYPB-214ENST00000513557 SNPHO15079 494 aa7.65□□□□□ -1.18
GYPB-214ENST00000513557 DIXDC1Q155Q3 683 aa7.65□□□□□ -1.18
GYPB-214ENST00000513557 MYSM1Q5VVJ2 828 aa7.65□□□□□ -1.18
GYPB-214ENST00000513557 PROCA1Q8NCQ7 364 aaPredicted RBP7.65□□□□□ -1.18
GYPB-214ENST00000513557 EYA1Q99502 592 aa7.64□□□□□ -1.19
GYPB-214ENST00000513557 NBPF26B4DH59 902 aa7.63□□□□□ -1.19
GYPB-214ENST00000513557 CLK2P49760 499 aaKnown RBP7.63□□□□□ -1.19
GYPB-214ENST00000513557 TBC1D2Q9BYX2 928 aa7.63□□□□□ -1.19
GYPB-214ENST00000513557 TSKSQ9UJT2 592 aa7.63□□□□□ -1.19
GYPB-214ENST00000513557 HOXB1P14653 301 aaPredicted RBP7.62□□□□□ -1.19
GYPB-214ENST00000513557 UBTFP17480 764 aaKnown RBP7.62□□□□□ -1.19
GYPB-214ENST00000513557 MCM6Q14566 821 aa7.62□□□□□ -1.19
GYPB-214ENST00000513557 PACS2Q86VP3 889 aa7.62□□□□□ -1.19
GYPB-214ENST00000513557 TRIM6-TRIM34B2RNG4 842 aa7.61□□□□□ -1.19
GYPB-214ENST00000513557 DNAJB2P25686 324 aa7.61□□□□□ -1.19
GYPB-214ENST00000513557 NUDT18Q6ZVK8 323 aa7.61□□□□□ -1.19
GYPB-214ENST00000513557 SULF1Q8IWU6 871 aa7.61□□□□□ -1.19
GYPB-214ENST00000513557 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.61□□□□□ -1.19
GYPB-214ENST00000513557 PNMA3Q9UL41 463 aa7.61□□□□□ -1.19
GYPB-214ENST00000513557 TATDN2Q93075 761 aa7.6□□□□□ -1.19
GYPB-214ENST00000513557 CLUAP1Q96AJ1 413 aa7.6□□□□□ -1.19
GYPB-214ENST00000513557 KCNH8Q96L42 1107 aa7.6□□□□□ -1.19
GYPB-214ENST00000513557 A6NJR5 290 aa7.59□□□□□ -1.19
GYPB-214ENST00000513557 DDX11L8A8MPP1 907 aa7.59□□□□□ -1.19
GYPB-214ENST00000513557 C3orf80F5H4A9 247 aa7.59□□□□□ -1.19
GYPB-214ENST00000513557 CD46P15529 392 aa7.59□□□□□ -1.19
GYPB-214ENST00000513557 NUTM1Q86Y26 1132 aa7.59□□□□□ -1.19
GYPB-214ENST00000513557 SPIRE2Q8WWL2 714 aa7.59□□□□□ -1.19
GYPB-214ENST00000513557 KCNK17Q96T54 332 aa7.58□□□□□ -1.2
GYPB-214ENST00000513557 TMEM134Q9H6X4 195 aa7.58□□□□□ -1.2
GYPB-214ENST00000513557 ARID3CA6NKF2 412 aa7.57□□□□□ -1.2
GYPB-214ENST00000513557 APBB1O00213 710 aa7.57□□□□□ -1.2
GYPB-214ENST00000513557 PROX2Q3B8N5 592 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms