RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 C9orf84Q5VXU9 1444 aa11.59□□□□□ -0.55
HMGXB3-204ENST00000513318 AFAP1Q8N556 730 aa11.58□□□□□ -0.56
HMGXB3-204ENST00000513318 GCC2Q8IWJ2 1684 aa11.58□□□□□ -0.56
HMGXB3-204ENST00000513318 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
HMGXB3-204ENST00000513318 SPAG9O60271 1321 aaKnown RBP11.57□□□□□ -0.56
HMGXB3-204ENST00000513318 ADGRL2O95490 1459 aa11.57□□□□□ -0.56
HMGXB3-204ENST00000513318 SIGLEC1Q9BZZ2 1709 aa11.56□□□□□ -0.56
HMGXB3-204ENST00000513318 YEATS2Q9ULM3 1422 aa11.56□□□□□ -0.56
HMGXB3-204ENST00000513318 EIF2AK4Q9P2K8 1649 aaKnown RBP11.56□□□□□ -0.56
HMGXB3-204ENST00000513318 TSPY4P0CV99 314 aa11.55□□□□□ -0.56
HMGXB3-204ENST00000513318 TSPY10P0CW01 314 aa11.55□□□□□ -0.56
HMGXB3-204ENST00000513318 ATP10AO60312 1499 aa11.53□□□□□ -0.56
HMGXB3-204ENST00000513318 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
HMGXB3-204ENST00000513318 DUOX2Q9NRD8 1548 aa11.53□□□□□ -0.56
HMGXB3-204ENST00000513318 PTPRKQ15262 1439 aa11.52□□□□□ -0.56
HMGXB3-204ENST00000513318 DSG3P32926 999 aa11.52□□□□□ -0.57
HMGXB3-204ENST00000513318 ANKRD30AQ9BXX3 1397 aa11.52□□□□□ -0.57
HMGXB3-204ENST00000513318 A2MP01023 1474 aa11.51□□□□□ -0.57
HMGXB3-204ENST00000513318 AGLP35573 1532 aa11.51□□□□□ -0.57
HMGXB3-204ENST00000513318 ROCK1Q13464 1354 aa11.51□□□□□ -0.57
HMGXB3-204ENST00000513318 NCOA1Q15788 1441 aa11.51□□□□□ -0.57
HMGXB3-204ENST00000513318 RNF17Q9BXT8 1623 aaKnown RBP11.5□□□□□ -0.57
HMGXB3-204ENST00000513318 FER1L4A9Z1Z3 1794 aa11.5□□□□□ -0.57
HMGXB3-204ENST00000513318 KIF15Q9NS87 1388 aa11.5□□□□□ -0.57
HMGXB3-204ENST00000513318 DEPDC5O75140 1603 aa11.49□□□□□ -0.57
HMGXB3-204ENST00000513318 ABCB7O75027 752 aa11.49□□□□□ -0.57
HMGXB3-204ENST00000513318 ERBINQ96RT1 1412 aa11.49□□□□□ -0.57
HMGXB3-204ENST00000513318 ITGAEP38570 1179 aa11.48□□□□□ -0.57
HMGXB3-204ENST00000513318 CHIC2Q9UKJ5 165 aa11.48□□□□□ -0.57
HMGXB3-204ENST00000513318 ZC3H13Q5T200 1668 aaKnown RBP11.47□□□□□ -0.57
HMGXB3-204ENST00000513318 DHX29Q7Z478 1369 aaKnown RBP11.47□□□□□ -0.57
HMGXB3-204ENST00000513318 UNC13BO14795 1591 aa11.46□□□□□ -0.57
HMGXB3-204ENST00000513318 HFM1A2PYH4 1435 aa11.46□□□□□ -0.57
HMGXB3-204ENST00000513318 POLA2Q14181 598 aa11.46□□□□□ -0.57
HMGXB3-204ENST00000513318 CEP152O94986 1710 aa11.46□□□□□ -0.58
HMGXB3-204ENST00000513318 ADAMTSL3P82987 1691 aa11.46□□□□□ -0.58
HMGXB3-204ENST00000513318 PRDM15P57071 1507 aaPredicted RBP11.45□□□□□ -0.58
HMGXB3-204ENST00000513318 MROH1Q8NDA8 1641 aa11.45□□□□□ -0.58
HMGXB3-204ENST00000513318 FAM135AQ9P2D6 1515 aa11.45□□□□□ -0.58
HMGXB3-204ENST00000513318 ANKRD50Q9ULJ7 1429 aa11.44□□□□□ -0.58
HMGXB3-204ENST00000513318 MROH2AA6NES4 1674 aa11.44□□□□□ -0.58
HMGXB3-204ENST00000513318 RRP7BPQ9NSQ0 103 aa11.44□□□□□ -0.58
HMGXB3-204ENST00000513318 MADDQ8WXG6 1647 aa11.44□□□□□ -0.58
HMGXB3-204ENST00000513318 NAIPQ13075 1403 aa11.43□□□□□ -0.58
HMGXB3-204ENST00000513318 CLTCQ00610 1675 aaKnown RBP11.43□□□□□ -0.58
HMGXB3-204ENST00000513318 RIMS1Q86UR5 1692 aaKnown RBP11.43□□□□□ -0.58
HMGXB3-204ENST00000513318 TRIM26Q12899 539 aaPredicted RBP11.43□□□□□ -0.58
HMGXB3-204ENST00000513318 CFAP65Q6ZU64 1925 aaKnown RBP11.42□□□□□ -0.58
HMGXB3-204ENST00000513318 IQGAP3Q86VI3 1631 aa11.42□□□□□ -0.58
HMGXB3-204ENST00000513318 ARID4BQ4LE39 1312 aaPredicted RBP11.41□□□□□ -0.58
HMGXB3-204ENST00000513318 KDM5DQ9BY66 1539 aa11.4□□□□□ -0.58
HMGXB3-204ENST00000513318 CAMSAP1Q5T5Y3 1602 aa11.4□□□□□ -0.58
HMGXB3-204ENST00000513318 VWDEQ8N2E2 1590 aa11.4□□□□□ -0.58
HMGXB3-204ENST00000513318 TET3O43151 1660 aa11.4□□□□□ -0.59
HMGXB3-204ENST00000513318 KIF3BO15066 747 aa11.39□□□□□ -0.59
HMGXB3-204ENST00000513318 C3P01024 1663 aa11.39□□□□□ -0.59
HMGXB3-204ENST00000513318 SETD5Q9C0A6 1442 aa11.38□□□□□ -0.59
HMGXB3-204ENST00000513318 ABCC3O15438 1527 aa11.37□□□□□ -0.59
HMGXB3-204ENST00000513318 CNTLNQ9NXG0 1405 aa11.36□□□□□ -0.59
HMGXB3-204ENST00000513318 SETD1BQ9UPS6 1966 aaKnown RBP11.36□□□□□ -0.59
HMGXB3-204ENST00000513318 LMTK2Q8IWU2 1503 aa11.35□□□□□ -0.59
HMGXB3-204ENST00000513318 MLECQ14165 292 aa11.35□□□□□ -0.59
HMGXB3-204ENST00000513318 GGT6Q6P531 493 aa11.35□□□□□ -0.59
HMGXB3-204ENST00000513318 KANK1Q14678 1352 aa11.35□□□□□ -0.59
HMGXB3-204ENST00000513318 E9PCH4 1651 aa11.35□□□□□ -0.59
HMGXB3-204ENST00000513318 EFCAB6Q5THR3 1501 aa11.35□□□□□ -0.59
HMGXB3-204ENST00000513318 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
HMGXB3-204ENST00000513318 PREX1Q8TCU6 1659 aa11.34□□□□□ -0.59
HMGXB3-204ENST00000513318 RAB3GAP2Q9H2M9 1393 aa11.34□□□□□ -0.59
HMGXB3-204ENST00000513318 SPHKAPQ2M3C7 1700 aa11.33□□□□□ -0.6
HMGXB3-204ENST00000513318 ESF1Q9H501 851 aaKnown RBP11.31□□□□□ -0.6
HMGXB3-204ENST00000513318 WASHC2CQ9Y4E1 1318 aa11.31□□□□□ -0.6
HMGXB3-204ENST00000513318 PTPRMP28827 1452 aa11.31□□□□□ -0.6
HMGXB3-204ENST00000513318 NUP155O75694 1391 aa11.3□□□□□ -0.6
HMGXB3-204ENST00000513318 PZPP20742 1482 aa11.3□□□□□ -0.6
HMGXB3-204ENST00000513318 RPRD2Q5VT52 1461 aaKnown RBP11.3□□□□□ -0.6
HMGXB3-204ENST00000513318 ARHGAP31Q2M1Z3 1444 aa11.29□□□□□ -0.6
HMGXB3-204ENST00000513318 HRCP23327 699 aa11.29□□□□□ -0.6
HMGXB3-204ENST00000513318 KDM4FA0A1W2PPD8 638 aa11.28□□□□□ -0.6
HMGXB3-204ENST00000513318 SPATA31D1Q6ZQQ2 1576 aa11.28□□□□□ -0.6
HMGXB3-204ENST00000513318 NPATQ14207 1427 aa11.27□□□□□ -0.6
HMGXB3-204ENST00000513318 ZNF142P52746 1687 aaPredicted RBP11.27□□□□□ -0.6
HMGXB3-204ENST00000513318 TRIM52Q96A61 297 aa11.27□□□□□ -0.61
HMGXB3-204ENST00000513318 PCGF6Q9BYE7 350 aa11.27□□□□□ -0.61
HMGXB3-204ENST00000513318 KIF1BO60333 1816 aa11.27□□□□□ -0.61
HMGXB3-204ENST00000513318 MYO3AQ8NEV4 1616 aa11.27□□□□□ -0.61
HMGXB3-204ENST00000513318 ZMYM3Q14202 1370 aa11.27□□□□□ -0.61
HMGXB3-204ENST00000513318 MYO5BQ9ULV0 1848 aa11.26□□□□□ -0.61
HMGXB3-204ENST00000513318 ERVK-7P63135 1459 aa11.25□□□□□ -0.61
HMGXB3-204ENST00000513318 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
HMGXB3-204ENST00000513318 SYNMO15061 1565 aa11.24□□□□□ -0.61
HMGXB3-204ENST00000513318 PIK3C2BO00750 1634 aa11.24□□□□□ -0.61
HMGXB3-204ENST00000513318 KDM5AP29375 1690 aaKnown RBP11.24□□□□□ -0.61
HMGXB3-204ENST00000513318 TRPM2O94759 1503 aa11.23□□□□□ -0.61
HMGXB3-204ENST00000513318 NOS1P29475 1434 aa11.22□□□□□ -0.61
HMGXB3-204ENST00000513318 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.61
HMGXB3-204ENST00000513318 CLTCL1P53675 1640 aa11.21□□□□□ -0.61
HMGXB3-204ENST00000513318 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
HMGXB3-204ENST00000513318 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
HMGXB3-204ENST00000513318 NLRP1Q9C000 1473 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms