RNA–Protein interactions for RNA: ENST00000513289.5

CDH9-205, Transcript of cadherin 9, humanhuman

TSL 3

Gene CDH9, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-205ENST00000513289 NUTM2FA1L443 756 aa9.52□□□□□ -0.89
CDH9-205ENST00000513289 CCDC102AQ96A19 550 aa9.52□□□□□ -0.89
CDH9-205ENST00000513289 SMARCA2P51531 1590 aa9.51□□□□□ -0.89
CDH9-205ENST00000513289 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
CDH9-205ENST00000513289 DDX12PQ92771 950 aa9.51□□□□□ -0.89
CDH9-205ENST00000513289 MAP2K5Q13163 448 aa9.5□□□□□ -0.89
CDH9-205ENST00000513289 CUX2O14529 1486 aa9.5□□□□□ -0.89
CDH9-205ENST00000513289 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
CDH9-205ENST00000513289 FECHP22830 423 aa9.48□□□□□ -0.89
CDH9-205ENST00000513289 PTGER2P43116 358 aa9.48□□□□□ -0.89
CDH9-205ENST00000513289 MINK1Q8N4C8 1332 aaPredicted RBP9.48□□□□□ -0.89
CDH9-205ENST00000513289 SMARCA4P51532 1647 aa9.48□□□□□ -0.89
CDH9-205ENST00000513289 BAZ1AQ9NRL2 1556 aaPredicted RBP9.47□□□□□ -0.89
CDH9-205ENST00000513289 GNPATO15228 680 aa9.47□□□□□ -0.89
CDH9-205ENST00000513289 HMGXB3Q12766 1538 aa9.46□□□□□ -0.89
CDH9-205ENST00000513289 FAM117AQ9C073 453 aa9.46□□□□□ -0.9
CDH9-205ENST00000513289 NESP48681 1621 aa9.45□□□□□ -0.9
CDH9-205ENST00000513289 IRF6O14896 467 aa9.45□□□□□ -0.9
CDH9-205ENST00000513289 EVI5O60447 810 aa9.45□□□□□ -0.9
CDH9-205ENST00000513289 PARP9Q8IXQ6 854 aa9.45□□□□□ -0.9
CDH9-205ENST00000513289 ARXQ96QS3 562 aa9.45□□□□□ -0.9
CDH9-205ENST00000513289 FCHSD2O94868 740 aa9.44□□□□□ -0.9
CDH9-205ENST00000513289 HIC1Q14526 733 aa9.44□□□□□ -0.9
CDH9-205ENST00000513289 AMHR2Q16671 573 aa9.44□□□□□ -0.9
CDH9-205ENST00000513289 PLEKHG3A1L390 1219 aa9.43□□□□□ -0.9
CDH9-205ENST00000513289 SUPT5HO00267 1087 aaKnown RBP9.43□□□□□ -0.9
CDH9-205ENST00000513289 PTGDRQ13258 359 aa9.42□□□□□ -0.9
CDH9-205ENST00000513289 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
CDH9-205ENST00000513289 DAXXQ9UER7 740 aaPredicted RBP9.42□□□□□ -0.9
CDH9-205ENST00000513289 TBC1D12O60347 775 aa9.41□□□□□ -0.9
CDH9-205ENST00000513289 MROH2BQ7Z745 1585 aa9.41□□□□□ -0.9
CDH9-205ENST00000513289 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.9
CDH9-205ENST00000513289 CDHR5Q9HBB8 845 aa9.4□□□□□ -0.9
CDH9-205ENST00000513289 ZNF316A6NFI3 1004 aaPredicted RBP9.39□□□□□ -0.91
CDH9-205ENST00000513289 EMP3P54852 163 aa9.38□□□□□ -0.91
CDH9-205ENST00000513289 PDS5BQ9NTI5 1447 aa9.38□□□□□ -0.91
CDH9-205ENST00000513289 DDRGK1Q96HY6 314 aa9.37□□□□□ -0.91
CDH9-205ENST00000513289 POTEB3A0JP26 581 aa9.36□□□□□ -0.91
CDH9-205ENST00000513289 TTLL12Q14166 644 aaPredicted RBP9.36□□□□□ -0.91
CDH9-205ENST00000513289 POTEBQ6S5H4 581 aa9.36□□□□□ -0.91
CDH9-205ENST00000513289 HS3ST6Q96QI5 342 aa9.36□□□□□ -0.91
CDH9-205ENST00000513289 PEG3Q9GZU2 1588 aa9.36□□□□□ -0.91
CDH9-205ENST00000513289 SLC34A2O95436 690 aa9.35□□□□□ -0.91
CDH9-205ENST00000513289 EN1Q05925 392 aaPredicted RBP9.35□□□□□ -0.91
CDH9-205ENST00000513289 ANO8Q9HCE9 1232 aaPredicted RBP9.35□□□□□ -0.91
CDH9-205ENST00000513289 NPDC1Q9NQX5 325 aaPredicted RBP9.34□□□□□ -0.91
CDH9-205ENST00000513289 CADPSQ9ULU8 1353 aa9.34□□□□□ -0.91
CDH9-205ENST00000513289 LAMC3Q9Y6N6 1575 aa9.33□□□□□ -0.92
CDH9-205ENST00000513289 MS4A1P11836 297 aa9.33□□□□□ -0.92
CDH9-205ENST00000513289 GIGYF2Q6Y7W6 1299 aaKnown RBP9.33□□□□□ -0.92
CDH9-205ENST00000513289 REPIN1Q9BWE0 567 aaKnown RBP9.33□□□□□ -0.92
CDH9-205ENST00000513289 MAP3K7O43318 606 aa9.32□□□□□ -0.92
CDH9-205ENST00000513289 PHF14O94880 888 aa9.32□□□□□ -0.92
CDH9-205ENST00000513289 TSR1Q2NL82 804 aaKnown RBP9.32□□□□□ -0.92
CDH9-205ENST00000513289 HOMEZQ8IX15 550 aa9.32□□□□□ -0.92
CDH9-205ENST00000513289 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
CDH9-205ENST00000513289 PCDHGA10Q9Y5H3 936 aa9.31□□□□□ -0.92
CDH9-205ENST00000513289 FAM205CA6NFA0 338 aa9.3□□□□□ -0.92
CDH9-205ENST00000513289 HOXB3P14651 431 aaPredicted RBP9.3□□□□□ -0.92
CDH9-205ENST00000513289 EPAS1Q99814 870 aa9.3□□□□□ -0.92
CDH9-205ENST00000513289 PHOX2BQ99453 314 aa9.29□□□□□ -0.92
CDH9-205ENST00000513289 ZMYND15Q9H091 742 aa9.29□□□□□ -0.92
CDH9-205ENST00000513289 PCDHGA4Q9Y5G9 962 aa9.28□□□□□ -0.92
CDH9-205ENST00000513289 DOK7Q18PE1 504 aa9.27□□□□□ -0.93
CDH9-205ENST00000513289 TMUB1Q9BVT8 246 aa9.27□□□□□ -0.93
CDH9-205ENST00000513289 THOC2Q8NI27 1593 aaKnown RBP9.27□□□□□ -0.93
CDH9-205ENST00000513289 MRC2Q9UBG0 1479 aa9.27□□□□□ -0.93
CDH9-205ENST00000513289 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
CDH9-205ENST00000513289 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
CDH9-205ENST00000513289 KDM4FA0A1W2PPD8 638 aa9.25□□□□□ -0.93
CDH9-205ENST00000513289 HOXB1P14653 301 aaPredicted RBP9.25□□□□□ -0.93
CDH9-205ENST00000513289 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
CDH9-205ENST00000513289 GOPCQ9HD26 462 aa9.25□□□□□ -0.93
CDH9-205ENST00000513289 WIZO95785 1651 aa9.25□□□□□ -0.93
CDH9-205ENST00000513289 MDM2Q00987 491 aaPredicted RBP9.24□□□□□ -0.93
CDH9-205ENST00000513289 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
CDH9-205ENST00000513289 RSPH6AQ9H0K4 717 aa9.24□□□□□ -0.93
CDH9-205ENST00000513289 RSF1Q96T23 1441 aaPredicted RBP9.23□□□□□ -0.93
CDH9-205ENST00000513289 CEP164Q9UPV0 1460 aa9.23□□□□□ -0.93
CDH9-205ENST00000513289 ONECUT3O60422 494 aaPredicted RBP9.23□□□□□ -0.93
CDH9-205ENST00000513289 CLCN1P35523 988 aa9.23□□□□□ -0.93
CDH9-205ENST00000513289 GPCPD1Q9NPB8 672 aa9.23□□□□□ -0.93
CDH9-205ENST00000513289 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
CDH9-205ENST00000513289 FANCD2Q9BXW9 1451 aa9.22□□□□□ -0.93
CDH9-205ENST00000513289 RIMBP2O15034 1052 aa9.22□□□□□ -0.93
CDH9-205ENST00000513289 NLRP7Q8WX94 980 aa9.22□□□□□ -0.93
CDH9-205ENST00000513289 MYT1LQ9UL68 1186 aa9.22□□□□□ -0.93
CDH9-205ENST00000513289 FOSBP53539 338 aa9.21□□□□□ -0.94
CDH9-205ENST00000513289 PADI6Q6TGC4 694 aa9.21□□□□□ -0.94
CDH9-205ENST00000513289 FBXW7Q969H0 707 aa9.21□□□□□ -0.94
CDH9-205ENST00000513289 METTL3Q86U44 580 aaKnown RBP9.2□□□□□ -0.94
CDH9-205ENST00000513289 SH3D19Q5HYK7 790 aa9.19□□□□□ -0.94
CDH9-205ENST00000513289 C1orf115Q9H7X2 142 aa9.19□□□□□ -0.94
CDH9-205ENST00000513289 ERBB3P21860 1342 aa9.19□□□□□ -0.94
CDH9-205ENST00000513289 WDR62O43379 1518 aa9.18□□□□□ -0.94
CDH9-205ENST00000513289 CFTRP13569 1480 aa9.18□□□□□ -0.94
CDH9-205ENST00000513289 FLIIQ13045 1269 aa9.18□□□□□ -0.94
CDH9-205ENST00000513289 KHSRPQ92945 711 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDH9-205ENST00000513289 PCMTD1Q96MG8 357 aaPredicted RBP9.18□□□□□ -0.94
CDH9-205ENST00000513289 ZSWIM6Q9HCJ5 1215 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms