RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 TSPY10P0CW01 314 aa40.05■■■■■ 4
CLDND1-226ENST00000513287 KIF3BO15066 747 aa40.04■■■■■ 4
CLDND1-226ENST00000513287 TCOF1Q13428 1488 aaKnown RBP40.01■■■■■ 4
CLDND1-226ENST00000513287 KDM5DQ9BY66 1539 aa39.99■■■■□ 3.99
CLDND1-226ENST00000513287 A2ML1A8K2U0 1454 aa39.97■■■■□ 3.99
CLDND1-226ENST00000513287 MIA2Q96PC5 1412 aa39.96■■■■□ 3.99
CLDND1-226ENST00000513287 NCKAP5LQ9HCH0 1330 aa39.95■■■■□ 3.99
CLDND1-226ENST00000513287 PZPP20742 1482 aa39.95■■■■□ 3.99
CLDND1-226ENST00000513287 MAST1Q9Y2H9 1570 aa39.95■■■■□ 3.99
CLDND1-226ENST00000513287 WASHC2CQ9Y4E1 1318 aa39.91■■■■□ 3.98
CLDND1-226ENST00000513287 DNMT1P26358 1616 aaKnown RBP39.91■■■■□ 3.98
CLDND1-226ENST00000513287 KANK4Q5T7N3 995 aaPredicted RBP39.89■■■■□ 3.98
CLDND1-226ENST00000513287 MYOM3Q5VTT5 1437 aa39.88■■■■□ 3.97
CLDND1-226ENST00000513287 TNRQ92752 1358 aa39.87■■■■□ 3.97
CLDND1-226ENST00000513287 FBXO31Q5XUX0 539 aaPredicted RBP39.84■■■■□ 3.97
CLDND1-226ENST00000513287 RNF17Q9BXT8 1623 aaKnown RBP39.83■■■■□ 3.97
CLDND1-226ENST00000513287 EIF2AK4Q9P2K8 1649 aaKnown RBP39.8■■■■□ 3.96
CLDND1-226ENST00000513287 ZNF335Q9H4Z2 1342 aaPredicted RBP39.79■■■■□ 3.96
CLDND1-226ENST00000513287 NLRP1Q9C000 1473 aa39.78■■■■□ 3.96
CLDND1-226ENST00000513287 ZC3H13Q5T200 1668 aaKnown RBP39.76■■■■□ 3.96
CLDND1-226ENST00000513287 THEMISQ8N1K5 641 aaPredicted RBP39.72■■■■□ 3.95
CLDND1-226ENST00000513287 POLR1AO95602 1720 aaPredicted RBP39.71■■■■□ 3.95
CLDND1-226ENST00000513287 ABCC3O15438 1527 aa39.7■■■■□ 3.95
CLDND1-226ENST00000513287 DUOX2Q9NRD8 1548 aa39.68■■■■□ 3.94
CLDND1-226ENST00000513287 NEURL4Q96JN8 1562 aa39.67■■■■□ 3.94
CLDND1-226ENST00000513287 ANKLE2Q86XL3 938 aa39.66■■■■□ 3.94
CLDND1-226ENST00000513287 SPATA31D1Q6ZQQ2 1576 aa39.65■■■■□ 3.94
CLDND1-226ENST00000513287 UGGT1Q9NYU2 1555 aa39.65■■■■□ 3.94
CLDND1-226ENST00000513287 SHANK2Q9UPX8 1470 aa39.65■■■■□ 3.94
CLDND1-226ENST00000513287 APLP2Q06481 763 aa39.65■■■■□ 3.94
CLDND1-226ENST00000513287 MROH1Q8NDA8 1641 aa39.64■■■■□ 3.94
CLDND1-226ENST00000513287 DEPDC5O75140 1603 aa39.61■■■■□ 3.93
CLDND1-226ENST00000513287 MED14O60244 1454 aa39.61■■■■□ 3.93
CLDND1-226ENST00000513287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.59■■■■□ 3.93
CLDND1-226ENST00000513287 ABCC5O15440 1437 aa39.58■■■■□ 3.93
CLDND1-226ENST00000513287 PTPN23Q9H3S7 1636 aa39.58■■■■□ 3.93
CLDND1-226ENST00000513287 CROCC2H7BZ55 1655 aa39.57■■■■□ 3.92
CLDND1-226ENST00000513287 CPS1P31327 1500 aa39.56■■■■□ 3.92
CLDND1-226ENST00000513287 ERBINQ96RT1 1412 aa39.56■■■■□ 3.92
CLDND1-226ENST00000513287 ERVK-7P63135 1459 aa39.56■■■■□ 3.92
CLDND1-226ENST00000513287 KIF15Q9NS87 1388 aa39.54■■■■□ 3.92
CLDND1-226ENST00000513287 UBAP1LF5GYI3 381 aa39.53■■■■□ 3.92
CLDND1-226ENST00000513287 ARHGAP31Q2M1Z3 1444 aa39.53■■■■□ 3.92
CLDND1-226ENST00000513287 PRDM15P57071 1507 aaPredicted RBP39.51■■■■□ 3.92
CLDND1-226ENST00000513287 FGD6Q6ZV73 1430 aa39.5■■■■□ 3.91
CLDND1-226ENST00000513287 NPHP4O75161 1426 aaPredicted RBP39.48■■■■□ 3.91
CLDND1-226ENST00000513287 DAPK1P53355 1430 aa39.48■■■■□ 3.91
CLDND1-226ENST00000513287 CEP152O94986 1710 aa39.48■■■■□ 3.91
CLDND1-226ENST00000513287 DISP3Q9P2K9 1392 aa39.48■■■■□ 3.91
CLDND1-226ENST00000513287 VWDEQ8N2E2 1590 aa39.44■■■■□ 3.9
CLDND1-226ENST00000513287 RRP7BPQ9NSQ0 103 aa39.43■■■■□ 3.9
CLDND1-226ENST00000513287 IQGAP1P46940 1657 aa39.41■■■■□ 3.9
CLDND1-226ENST00000513287 CFAP65Q6ZU64 1925 aaKnown RBP39.39■■■■□ 3.9
CLDND1-226ENST00000513287 UBR1Q8IWV7 1749 aa39.39■■■■□ 3.9
CLDND1-226ENST00000513287 ANKRD30AQ9BXX3 1397 aa39.38■■■■□ 3.89
CLDND1-226ENST00000513287 TOM1O60784 492 aa39.36■■■■□ 3.89
CLDND1-226ENST00000513287 KANK1Q14678 1352 aa39.33■■■■□ 3.89
CLDND1-226ENST00000513287 LMTK2Q8IWU2 1503 aa39.32■■■■□ 3.89
CLDND1-226ENST00000513287 ARHGAP23Q9P227 1491 aa39.31■■■■□ 3.88
CLDND1-226ENST00000513287 SLIT1O75093 1534 aa39.31■■■■□ 3.88
CLDND1-226ENST00000513287 ADGRL2O95490 1459 aa39.27■■■■□ 3.88
CLDND1-226ENST00000513287 ILDR2Q71H61 639 aa39.27■■■■□ 3.88
CLDND1-226ENST00000513287 SCAF11Q99590 1463 aaKnown RBP39.27■■■■□ 3.88
CLDND1-226ENST00000513287 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.24■■■■□ 3.87
CLDND1-226ENST00000513287 KDM5AP29375 1690 aaKnown RBP39.24■■■■□ 3.87
CLDND1-226ENST00000513287 CHIC2Q9UKJ5 165 aa39.22■■■■□ 3.87
CLDND1-226ENST00000513287 STRCP1A6NGW2 1772 aa39.19■■■■□ 3.86
CLDND1-226ENST00000513287 LTKP29376 864 aa39.19■■■■□ 3.86
CLDND1-226ENST00000513287 TXNDC2Q86VQ3 553 aa39.19■■■■□ 3.86
CLDND1-226ENST00000513287 SYNMO15061 1565 aa39.18■■■■□ 3.86
CLDND1-226ENST00000513287 EID1Q9Y6B2 187 aa39.17■■■■□ 3.86
CLDND1-226ENST00000513287 LRRC7Q96NW7 1537 aa39.17■■■■□ 3.86
CLDND1-226ENST00000513287 PIK3C2BO00750 1634 aa39.16■■■■□ 3.86
CLDND1-226ENST00000513287 SOCS7O14512 581 aa39.16■■■■□ 3.86
CLDND1-226ENST00000513287 TMEM2Q9UHN6 1383 aa39.15■■■■□ 3.86
CLDND1-226ENST00000513287 PIP4K2BP78356 416 aa39.13■■■■□ 3.85
CLDND1-226ENST00000513287 ALKQ9UM73 1620 aa39.13■■■■□ 3.85
CLDND1-226ENST00000513287 NOS1P29475 1434 aa39.13■■■■□ 3.85
CLDND1-226ENST00000513287 HSPA1LP34931 641 aa39.12■■■■□ 3.85
CLDND1-226ENST00000513287 EFCAB6Q5THR3 1501 aa39.11■■■■□ 3.85
CLDND1-226ENST00000513287 IDI1Q13907 227 aa39.11■■■■□ 3.85
CLDND1-226ENST00000513287 SCAF1Q9H7N4 1312 aaKnown RBP39.09■■■■□ 3.85
CLDND1-226ENST00000513287 ANKRD50Q9ULJ7 1429 aa39.07■■■■□ 3.85
CLDND1-226ENST00000513287 RPRD2Q5VT52 1461 aaKnown RBP39.07■■■■□ 3.85
CLDND1-226ENST00000513287 SLC52A1Q9NWF4 448 aa39.07■■■■□ 3.85
CLDND1-226ENST00000513287 FAM50AQ14320 339 aaKnown RBP39.06■■■■□ 3.84
CLDND1-226ENST00000513287 STAG3Q9UJ98 1225 aa39.06■■■■□ 3.84
CLDND1-226ENST00000513287 TET3O43151 1660 aa38.96■■■■□ 3.83
CLDND1-226ENST00000513287 ADGRB3O60242 1522 aa38.95■■■■□ 3.83
CLDND1-226ENST00000513287 ROCK1Q13464 1354 aa38.93■■■■□ 3.82
CLDND1-226ENST00000513287 XIRP1Q702N8 1843 aaKnown RBP38.91■■■■□ 3.82
CLDND1-226ENST00000513287 MED1Q15648 1581 aaPredicted RBP38.9■■■■□ 3.82
CLDND1-226ENST00000513287 KCNA6P17658 529 aa38.89■■■■□ 3.82
CLDND1-226ENST00000513287 UNC13BO14795 1591 aa38.88■■■■□ 3.81
CLDND1-226ENST00000513287 GCC2Q8IWJ2 1684 aa38.86■■■■□ 3.81
CLDND1-226ENST00000513287 HDGFP51858 240 aaKnown RBP38.82■■■■□ 3.8
CLDND1-226ENST00000513287 ZFYVE9O95405 1425 aa38.8■■■■□ 3.8
CLDND1-226ENST00000513287 SLC26A8Q96RN1 970 aa38.77■■■■□ 3.8
CLDND1-226ENST00000513287 FAM135BQ49AJ0 1406 aa38.77■■■■□ 3.8
CLDND1-226ENST00000513287 TMEM131LA2VDJ0 1609 aa38.76■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms