RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ANKLE2Q86XL3 938 aa18.46■□□□□ 0.55
RNF4-218ENST00000513284 TNRQ92752 1358 aa18.45■□□□□ 0.54
RNF4-218ENST00000513284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.45■□□□□ 0.54
RNF4-218ENST00000513284 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
RNF4-218ENST00000513284 PLEKHH2Q8IVE3 1493 aa18.43■□□□□ 0.54
RNF4-218ENST00000513284 POLR1AO95602 1720 aaPredicted RBP18.43■□□□□ 0.54
RNF4-218ENST00000513284 MBD5Q9P267 1494 aa18.42■□□□□ 0.54
RNF4-218ENST00000513284 DHX29Q7Z478 1369 aaKnown RBP18.42■□□□□ 0.54
RNF4-218ENST00000513284 THEMISQ8N1K5 641 aaPredicted RBP18.41■□□□□ 0.54
RNF4-218ENST00000513284 MED14O60244 1454 aa18.4■□□□□ 0.54
RNF4-218ENST00000513284 KIF3BO15066 747 aa18.4■□□□□ 0.54
RNF4-218ENST00000513284 ADGBQ8N7X0 1667 aa18.4■□□□□ 0.54
RNF4-218ENST00000513284 CCNB3Q8WWL7 1395 aa18.39■□□□□ 0.53
RNF4-218ENST00000513284 NPHP4O75161 1426 aaPredicted RBP18.39■□□□□ 0.53
RNF4-218ENST00000513284 MIA2Q96PC5 1412 aa18.39■□□□□ 0.53
RNF4-218ENST00000513284 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.53
RNF4-218ENST00000513284 STRCP1A6NGW2 1772 aa18.38■□□□□ 0.53
RNF4-218ENST00000513284 PZPP20742 1482 aa18.38■□□□□ 0.53
RNF4-218ENST00000513284 LRRC7Q96NW7 1537 aa18.38■□□□□ 0.53
RNF4-218ENST00000513284 RTEL1-TNFRSF6BF6WH68 1400 aa18.37■□□□□ 0.53
RNF4-218ENST00000513284 WASHC2CQ9Y4E1 1318 aa18.34■□□□□ 0.53
RNF4-218ENST00000513284 DEPDC5O75140 1603 aa18.34■□□□□ 0.53
RNF4-218ENST00000513284 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
RNF4-218ENST00000513284 UGGT1Q9NYU2 1555 aa18.32■□□□□ 0.52
RNF4-218ENST00000513284 NLRP1Q9C000 1473 aa18.32■□□□□ 0.52
RNF4-218ENST00000513284 POTEAQ6S8J7 498 aa18.31■□□□□ 0.52
RNF4-218ENST00000513284 KDM5DQ9BY66 1539 aa18.3■□□□□ 0.52
RNF4-218ENST00000513284 FAM135AQ9P2D6 1515 aa18.29■□□□□ 0.52
RNF4-218ENST00000513284 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
RNF4-218ENST00000513284 TIAM1Q13009 1591 aa18.28■□□□□ 0.52
RNF4-218ENST00000513284 MTUS2Q5JR59 1369 aa18.28■□□□□ 0.52
RNF4-218ENST00000513284 LTKP29376 864 aa18.25■□□□□ 0.51
RNF4-218ENST00000513284 RNF17Q9BXT8 1623 aaKnown RBP18.24■□□□□ 0.51
RNF4-218ENST00000513284 ZC3H13Q5T200 1668 aaKnown RBP18.22■□□□□ 0.51
RNF4-218ENST00000513284 RSPH4AQ5TD94 716 aa18.21■□□□□ 0.51
RNF4-218ENST00000513284 XIRP1Q702N8 1843 aaKnown RBP18.21■□□□□ 0.51
RNF4-218ENST00000513284 SYNMO15061 1565 aa18.2■□□□□ 0.5
RNF4-218ENST00000513284 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
RNF4-218ENST00000513284 FAM135BQ49AJ0 1406 aa18.19■□□□□ 0.5
RNF4-218ENST00000513284 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
RNF4-218ENST00000513284 NCOA2Q15596 1464 aa18.19■□□□□ 0.5
RNF4-218ENST00000513284 TXNDC2Q86VQ3 553 aa18.18■□□□□ 0.5
RNF4-218ENST00000513284 ERVK-7P63135 1459 aa18.17■□□□□ 0.5
RNF4-218ENST00000513284 ABCC3O15438 1527 aa18.17■□□□□ 0.5
RNF4-218ENST00000513284 CAMSAP2Q08AD1 1489 aa18.15■□□□□ 0.5
RNF4-218ENST00000513284 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.5
RNF4-218ENST00000513284 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.5
RNF4-218ENST00000513284 UBR1Q8IWV7 1749 aa18.14■□□□□ 0.49
RNF4-218ENST00000513284 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
RNF4-218ENST00000513284 TSPY4P0CV99 314 aa18.13■□□□□ 0.49
RNF4-218ENST00000513284 TSPY10P0CW01 314 aa18.13■□□□□ 0.49
RNF4-218ENST00000513284 CFAP65Q6ZU64 1925 aaKnown RBP18.12■□□□□ 0.49
RNF4-218ENST00000513284 RBM33Q96EV2 1170 aaKnown RBP18.12■□□□□ 0.49
RNF4-218ENST00000513284 SLIT1O75093 1534 aa18.11■□□□□ 0.49
RNF4-218ENST00000513284 TMEM94Q12767 1356 aa18.1■□□□□ 0.49
RNF4-218ENST00000513284 MROH1Q8NDA8 1641 aa18.09■□□□□ 0.49
RNF4-218ENST00000513284 ARHGEF5Q12774 1597 aa18.08■□□□□ 0.49
RNF4-218ENST00000513284 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
RNF4-218ENST00000513284 KCNA6P17658 529 aa18.06■□□□□ 0.48
RNF4-218ENST00000513284 EID1Q9Y6B2 187 aa18.05■□□□□ 0.48
RNF4-218ENST00000513284 ROBO1Q9Y6N7 1651 aa18.05■□□□□ 0.48
RNF4-218ENST00000513284 TMEM2Q9UHN6 1383 aa18.04■□□□□ 0.48
RNF4-218ENST00000513284 PROSER2Q86WR7 435 aaPredicted RBP18.04■□□□□ 0.48
RNF4-218ENST00000513284 UPF1Q92900 1129 aaKnown RBP eCLIP18.04■□□□□ 0.48
RNF4-218ENST00000513284 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
RNF4-218ENST00000513284 SLC26A8Q96RN1 970 aa18.03■□□□□ 0.48
RNF4-218ENST00000513284 CEP152O94986 1710 aa18.03■□□□□ 0.48
RNF4-218ENST00000513284 TET3O43151 1660 aa18.02■□□□□ 0.47
RNF4-218ENST00000513284 MAST1Q9Y2H9 1570 aa18.01■□□□□ 0.47
RNF4-218ENST00000513284 ARHGAP31Q2M1Z3 1444 aa18.01■□□□□ 0.47
RNF4-218ENST00000513284 IDI1Q13907 227 aa18■□□□□ 0.47
RNF4-218ENST00000513284 SLAIN2Q9P270 581 aa18■□□□□ 0.47
RNF4-218ENST00000513284 EIF2AK4Q9P2K8 1649 aaKnown RBP18■□□□□ 0.47
RNF4-218ENST00000513284 PIK3C2BO00750 1634 aa17.98■□□□□ 0.47
RNF4-218ENST00000513284 JCADQ9P266 1359 aa17.97■□□□□ 0.47
RNF4-218ENST00000513284 PRDM15P57071 1507 aaPredicted RBP17.96■□□□□ 0.47
RNF4-218ENST00000513284 STAG3Q9UJ98 1225 aa17.94■□□□□ 0.46
RNF4-218ENST00000513284 LRP6O75581 1613 aa17.94■□□□□ 0.46
RNF4-218ENST00000513284 DUOX2Q9NRD8 1548 aa17.93■□□□□ 0.46
RNF4-218ENST00000513284 TRIM52Q96A61 297 aa17.93■□□□□ 0.46
RNF4-218ENST00000513284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.464e-7■■□□□ 12.7
RNF4-218ENST00000513284 LRRC9Q6ZRR7 1453 aa17.93■□□□□ 0.46
RNF4-218ENST00000513284 PHLPP1O60346 1717 aa17.92■□□□□ 0.46
RNF4-218ENST00000513284 SRCAPQ6ZRS2 3230 aa17.92■□□□□ 0.46
RNF4-218ENST00000513284 RRP7BPQ9NSQ0 103 aa17.92■□□□□ 0.46
RNF4-218ENST00000513284 KANK4Q5T7N3 995 aaPredicted RBP17.91■□□□□ 0.46
RNF4-218ENST00000513284 EFCAB6Q5THR3 1501 aa17.91■□□□□ 0.46
RNF4-218ENST00000513284 MSH6P52701 1360 aa17.91■□□□□ 0.46
RNF4-218ENST00000513284 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
RNF4-218ENST00000513284 NWD1Q149M9 1564 aa17.89■□□□□ 0.45
RNF4-218ENST00000513284 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
RNF4-218ENST00000513284 ZNF772Q68DY9 489 aaPredicted RBP17.88■□□□□ 0.45
RNF4-218ENST00000513284 KIF15Q9NS87 1388 aa17.88■□□□□ 0.45
RNF4-218ENST00000513284 KDM5AP29375 1690 aaKnown RBP17.87■□□□□ 0.45
RNF4-218ENST00000513284 SPATA31A6Q5VVP1 1343 aa17.87■□□□□ 0.45
RNF4-218ENST00000513284 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
RNF4-218ENST00000513284 ABCC5O15440 1437 aa17.85■□□□□ 0.45
RNF4-218ENST00000513284 RXRBP28702 533 aa17.85■□□□□ 0.45
RNF4-218ENST00000513284 NOS1P29475 1434 aa17.85■□□□□ 0.45
RNF4-218ENST00000513284 FGD6Q6ZV73 1430 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms