RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 SETD1BQ9UPS6 1966 aaKnown RBP27.32■■□□□ 1.96
DDR1-272ENST00000513243 PREX1Q8TCU6 1659 aa27.32■■□□□ 1.96
DDR1-272ENST00000513243 ANKRD30AQ9BXX3 1397 aa27.31■■□□□ 1.96
DDR1-272ENST00000513243 WASHC2CQ9Y4E1 1318 aa27.3■■□□□ 1.96
DDR1-272ENST00000513243 NPATQ14207 1427 aa27.3■■□□□ 1.96
DDR1-272ENST00000513243 UHRF1BP1Q6BDS2 1440 aa27.3■■□□□ 1.96
DDR1-272ENST00000513243 EIF2AK4Q9P2K8 1649 aaKnown RBP27.3■■□□□ 1.96
DDR1-272ENST00000513243 NCOA1Q15788 1441 aa27.29■■□□□ 1.96
DDR1-272ENST00000513243 RNF17Q9BXT8 1623 aaKnown RBP27.28■■□□□ 1.96
DDR1-272ENST00000513243 KDM5DQ9BY66 1539 aa27.28■■□□□ 1.96
DDR1-272ENST00000513243 FAM135AQ9P2D6 1515 aa27.27■■□□□ 1.96
DDR1-272ENST00000513243 PTPRKQ15262 1439 aa27.27■■□□□ 1.96
DDR1-272ENST00000513243 ERBINQ96RT1 1412 aa27.26■■□□□ 1.95
DDR1-272ENST00000513243 ADGRL2O95490 1459 aa27.25■■□□□ 1.95
DDR1-272ENST00000513243 MROH1Q8NDA8 1641 aa27.23■■□□□ 1.95
DDR1-272ENST00000513243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.21■■□□□ 1.95
DDR1-272ENST00000513243 FBXO31Q5XUX0 539 aaPredicted RBP27.2■■□□□ 1.94
DDR1-272ENST00000513243 ABCC3O15438 1527 aa27.2■■□□□ 1.94
DDR1-272ENST00000513243 PZPP20742 1482 aa27.19■■□□□ 1.94
DDR1-272ENST00000513243 ITGAEP38570 1179 aa27.15■■□□□ 1.94
DDR1-272ENST00000513243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.15■■□□□ 1.94
DDR1-272ENST00000513243 PRDM15P57071 1507 aaPredicted RBP27.14■■□□□ 1.94
DDR1-272ENST00000513243 RRBP1Q9P2E9 1410 aaKnown RBP27.14■■□□□ 1.93
DDR1-272ENST00000513243 ZC3H13Q5T200 1668 aaKnown RBP27.14■■□□□ 1.93
DDR1-272ENST00000513243 ANKRD50Q9ULJ7 1429 aa27.12■■□□□ 1.93
DDR1-272ENST00000513243 DEPDC5O75140 1603 aa27.12■■□□□ 1.93
DDR1-272ENST00000513243 MYO3AQ8NEV4 1616 aa27.12■■□□□ 1.93
DDR1-272ENST00000513243 ROCK1Q13464 1354 aa27.11■■□□□ 1.93
DDR1-272ENST00000513243 TNRQ92752 1358 aa27.11■■□□□ 1.93
DDR1-272ENST00000513243 CEP152O94986 1710 aa27.1■■□□□ 1.93
DDR1-272ENST00000513243 KANK1Q14678 1352 aa27.08■■□□□ 1.93
DDR1-272ENST00000513243 CEP170BQ9Y4F5 1589 aaPredicted RBP27.07■■□□□ 1.92
DDR1-272ENST00000513243 CAMSAP1Q5T5Y3 1602 aa27.07■■□□□ 1.92
DDR1-272ENST00000513243 STRCQ7RTU9 1775 aa27.07■■□□□ 1.92
DDR1-272ENST00000513243 ZNF142P52746 1687 aaPredicted RBP27.05■■□□□ 1.92
DDR1-272ENST00000513243 A2ML1A8K2U0 1454 aa27.04■■□□□ 1.92
DDR1-272ENST00000513243 ARHGAP31Q2M1Z3 1444 aa27.03■■□□□ 1.92
DDR1-272ENST00000513243 VWDEQ8N2E2 1590 aa27.03■■□□□ 1.92
DDR1-272ENST00000513243 ERVK-7P63135 1459 aa27.02■■□□□ 1.92
DDR1-272ENST00000513243 SPATA31D1Q6ZQQ2 1576 aa27.01■■□□□ 1.92
DDR1-272ENST00000513243 LMTK2Q8IWU2 1503 aa27■■□□□ 1.91
DDR1-272ENST00000513243 DMRT2Q9Y5R5 561 aa27■■□□□ 1.91
DDR1-272ENST00000513243 NLRP1Q9C000 1473 aa26.99■■□□□ 1.91
DDR1-272ENST00000513243 NCKAP5LQ9HCH0 1330 aa26.96■■□□□ 1.91
DDR1-272ENST00000513243 PLA2R1Q13018 1463 aa26.96■■□□□ 1.91
DDR1-272ENST00000513243 CFAP65Q6ZU64 1925 aaKnown RBP26.96■■□□□ 1.91
DDR1-272ENST00000513243 PTPRTO14522 1441 aa26.94■■□□□ 1.9
DDR1-272ENST00000513243 UNC13BO14795 1591 aa26.92■■□□□ 1.9
DDR1-272ENST00000513243 PKD2Q13563 968 aa26.91■■□□□ 1.9
DDR1-272ENST00000513243 EFCAB6Q5THR3 1501 aa26.9■■□□□ 1.9
DDR1-272ENST00000513243 UGGT1Q9NYU2 1555 aa26.9■■□□□ 1.9
DDR1-272ENST00000513243 THEMISQ8N1K5 641 aaPredicted RBP26.9■■□□□ 1.9
DDR1-272ENST00000513243 NAIPQ13075 1403 aa26.86■■□□□ 1.89
DDR1-272ENST00000513243 NUP155O75694 1391 aa26.85■■□□□ 1.89
DDR1-272ENST00000513243 NOS1P29475 1434 aa26.84■■□□□ 1.89
DDR1-272ENST00000513243 TET3O43151 1660 aa26.84■■□□□ 1.89
DDR1-272ENST00000513243 RPRD2Q5VT52 1461 aaKnown RBP26.83■■□□□ 1.89
DDR1-272ENST00000513243 ANKLE2Q86XL3 938 aa26.82■■□□□ 1.88
DDR1-272ENST00000513243 SYNMO15061 1565 aa26.81■■□□□ 1.88
DDR1-272ENST00000513243 IQGAP3Q86VI3 1631 aa26.81■■□□□ 1.88
DDR1-272ENST00000513243 IDI1Q13907 227 aa26.81■■□□□ 1.88
DDR1-272ENST00000513243 HFM1A2PYH4 1435 aa26.8■■□□□ 1.88
DDR1-272ENST00000513243 GCC2Q8IWJ2 1684 aa26.79■■□□□ 1.88
DDR1-272ENST00000513243 UBR1Q8IWV7 1749 aa26.79■■□□□ 1.88
DDR1-272ENST00000513243 NEURL4Q96JN8 1562 aa26.77■■□□□ 1.88
DDR1-272ENST00000513243 ILDR1Q86SU0 546 aaPredicted RBP26.77■■□□□ 1.88
DDR1-272ENST00000513243 CERKQ8TCT0 537 aa26.77■■□□□ 1.88
DDR1-272ENST00000513243 PIK3C2BO00750 1634 aa26.76■■□□□ 1.87
DDR1-272ENST00000513243 SLC52A1Q9NWF4 448 aa26.76■■□□□ 1.87
DDR1-272ENST00000513243 POLR1AO95602 1720 aaPredicted RBP26.76■■□□□ 1.87
DDR1-272ENST00000513243 E9PCH4 1651 aa26.75■■□□□ 1.87
DDR1-272ENST00000513243 STAG3Q9UJ98 1225 aa26.74■■□□□ 1.87
DDR1-272ENST00000513243 MED14O60244 1454 aa26.71■■□□□ 1.87
DDR1-272ENST00000513243 ARHGAP23Q9P227 1491 aa26.71■■□□□ 1.87
DDR1-272ENST00000513243 ZNF335Q9H4Z2 1342 aaPredicted RBP26.7■■□□□ 1.87
DDR1-272ENST00000513243 LTBP4Q8N2S1 1624 aa26.7■■□□□ 1.86
DDR1-272ENST00000513243 NPHP4O75161 1426 aaPredicted RBP26.7■■□□□ 1.86
DDR1-272ENST00000513243 SLIT1O75093 1534 aa26.7■■□□□ 1.86
DDR1-272ENST00000513243 LTKP29376 864 aa26.69■■□□□ 1.86
DDR1-272ENST00000513243 TXNDC2Q86VQ3 553 aa26.68■■□□□ 1.86
DDR1-272ENST00000513243 FBXO41Q8TF61 875 aa26.68■■□□□ 1.86
DDR1-272ENST00000513243 TMEM2Q9UHN6 1383 aa26.68■■□□□ 1.86
DDR1-272ENST00000513243 KDM5AP29375 1690 aaKnown RBP26.67■■□□□ 1.86
DDR1-272ENST00000513243 TRIM52Q96A61 297 aa26.66■■□□□ 1.86
DDR1-272ENST00000513243 SCAF11Q99590 1463 aaKnown RBP26.66■■□□□ 1.86
DDR1-272ENST00000513243 ADGRB3O60242 1522 aa26.65■■□□□ 1.86
DDR1-272ENST00000513243 EID1Q9Y6B2 187 aa26.64■■□□□ 1.86
DDR1-272ENST00000513243 IQGAP1P46940 1657 aa26.62■■□□□ 1.85
DDR1-272ENST00000513243 TMEM131LA2VDJ0 1609 aa26.58■■□□□ 1.85
DDR1-272ENST00000513243 CHGAP10645 457 aaKnown RBP26.58■■□□□ 1.85
DDR1-272ENST00000513243 SLC4A1APQ9BWU0 796 aaKnown RBP26.56■■□□□ 1.84
DDR1-272ENST00000513243 SPHKAPQ2M3C7 1700 aa26.54■■□□□ 1.84
DDR1-272ENST00000513243 MYO5BQ9ULV0 1848 aa26.54■■□□□ 1.84
DDR1-272ENST00000513243 ZFYVE9O95405 1425 aa26.53■■□□□ 1.84
DDR1-272ENST00000513243 SETD5Q9C0A6 1442 aa26.52■■□□□ 1.84
DDR1-272ENST00000513243 IQSEC2Q5JU85 1478 aa26.51■■□□□ 1.83
DDR1-272ENST00000513243 RIMS2Q9UQ26 1411 aa26.51■■□□□ 1.83
DDR1-272ENST00000513243 HDGFP51858 240 aaKnown RBP26.49■■□□□ 1.83
DDR1-272ENST00000513243 CPS1P31327 1500 aa26.49■■□□□ 1.83
DDR1-272ENST00000513243 TRPM2O94759 1503 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms