RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 ABCC5O15440 1437 aa30.43■■■□□ 2.46
CCHCR1-230ENST00000513222 ZNF142P52746 1687 aaPredicted RBP30.42■■■□□ 2.46
CCHCR1-230ENST00000513222 KDM5DQ9BY66 1539 aa30.42■■■□□ 2.46
CCHCR1-230ENST00000513222 DNMT1P26358 1616 aaKnown RBP30.42■■■□□ 2.46
CCHCR1-230ENST00000513222 DUOX2Q9NRD8 1548 aa30.39■■■□□ 2.46
CCHCR1-230ENST00000513222 ILDR1Q86SU0 546 aaPredicted RBP30.39■■■□□ 2.46
CCHCR1-230ENST00000513222 MYO3AQ8NEV4 1616 aa30.38■■■□□ 2.45
CCHCR1-230ENST00000513222 DMRT2Q9Y5R5 561 aa30.37■■■□□ 2.45
CCHCR1-230ENST00000513222 DAPK1P53355 1430 aa30.36■■■□□ 2.45
CCHCR1-230ENST00000513222 PZPP20742 1482 aa30.35■■■□□ 2.45
CCHCR1-230ENST00000513222 ZC3H13Q5T200 1668 aaKnown RBP30.34■■■□□ 2.45
CCHCR1-230ENST00000513222 MROH1Q8NDA8 1641 aa30.34■■■□□ 2.45
CCHCR1-230ENST00000513222 NCOA1Q15788 1441 aa30.34■■■□□ 2.45
CCHCR1-230ENST00000513222 PTPRTO14522 1441 aa30.33■■■□□ 2.45
CCHCR1-230ENST00000513222 CEP170BQ9Y4F5 1589 aaPredicted RBP30.32■■■□□ 2.44
CCHCR1-230ENST00000513222 WASHC2CQ9Y4E1 1318 aa30.31■■■□□ 2.44
CCHCR1-230ENST00000513222 ERBINQ96RT1 1412 aa30.29■■■□□ 2.44
CCHCR1-230ENST00000513222 ABCC3O15438 1527 aa30.28■■■□□ 2.44
CCHCR1-230ENST00000513222 PLA2R1Q13018 1463 aa30.28■■■□□ 2.44
CCHCR1-230ENST00000513222 CAMSAP1Q5T5Y3 1602 aa30.28■■■□□ 2.44
CCHCR1-230ENST00000513222 KIF15Q9NS87 1388 aa30.28■■■□□ 2.44
CCHCR1-230ENST00000513222 A2ML1A8K2U0 1454 aa30.25■■■□□ 2.43
CCHCR1-230ENST00000513222 DEPDC5O75140 1603 aa30.25■■■□□ 2.43
CCHCR1-230ENST00000513222 PRDM15P57071 1507 aaPredicted RBP30.24■■■□□ 2.43
CCHCR1-230ENST00000513222 FBXO41Q8TF61 875 aa30.24■■■□□ 2.43
CCHCR1-230ENST00000513222 ADGRL2O95490 1459 aa30.24■■■□□ 2.43
CCHCR1-230ENST00000513222 TNRQ92752 1358 aa30.21■■■□□ 2.43
CCHCR1-230ENST00000513222 FBXO31Q5XUX0 539 aaPredicted RBP30.21■■■□□ 2.43
CCHCR1-230ENST00000513222 ANKRD30AQ9BXX3 1397 aa30.2■■■□□ 2.43
CCHCR1-230ENST00000513222 SPATA31D1Q6ZQQ2 1576 aa30.19■■■□□ 2.42
CCHCR1-230ENST00000513222 RRP7BPQ9NSQ0 103 aa30.18■■■□□ 2.42
CCHCR1-230ENST00000513222 CEP152O94986 1710 aa30.18■■■□□ 2.42
CCHCR1-230ENST00000513222 NLRP1Q9C000 1473 aa30.18■■■□□ 2.42
CCHCR1-230ENST00000513222 PKD2Q13563 968 aa30.17■■■□□ 2.42
CCHCR1-230ENST00000513222 ARHGAP31Q2M1Z3 1444 aa30.16■■■□□ 2.42
CCHCR1-230ENST00000513222 CERKQ8TCT0 537 aa30.14■■■□□ 2.42
CCHCR1-230ENST00000513222 VWDEQ8N2E2 1590 aa30.14■■■□□ 2.42
CCHCR1-230ENST00000513222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.1■■■□□ 2.41
CCHCR1-230ENST00000513222 ERVK-7P63135 1459 aa30.1■■■□□ 2.41
CCHCR1-230ENST00000513222 LMTK2Q8IWU2 1503 aa30.1■■■□□ 2.41
CCHCR1-230ENST00000513222 LTBP4Q8N2S1 1624 aa30.1■■■□□ 2.41
CCHCR1-230ENST00000513222 CFAP65Q6ZU64 1925 aaKnown RBP30.09■■■□□ 2.41
CCHCR1-230ENST00000513222 NCKAP5LQ9HCH0 1330 aa30.07■■■□□ 2.4
CCHCR1-230ENST00000513222 CHIC2Q9UKJ5 165 aa30.07■■■□□ 2.4
CCHCR1-230ENST00000513222 POLR1AO95602 1720 aaPredicted RBP30.07■■■□□ 2.4
CCHCR1-230ENST00000513222 FAM50AQ14320 339 aaKnown RBP30.05■■■□□ 2.4
CCHCR1-230ENST00000513222 UGGT1Q9NYU2 1555 aa30.04■■■□□ 2.4
CCHCR1-230ENST00000513222 THEMISQ8N1K5 641 aaPredicted RBP30.03■■■□□ 2.4
CCHCR1-230ENST00000513222 NEURL4Q96JN8 1562 aa30.02■■■□□ 2.4
CCHCR1-230ENST00000513222 ROCK1Q13464 1354 aa30.02■■■□□ 2.4
CCHCR1-230ENST00000513222 KANK1Q14678 1352 aa30.01■■■□□ 2.39
CCHCR1-230ENST00000513222 IQSEC2Q5JU85 1478 aa30■■■□□ 2.39
CCHCR1-230ENST00000513222 ANKRD50Q9ULJ7 1429 aa30■■■□□ 2.39
CCHCR1-230ENST00000513222 MED14O60244 1454 aa29.99■■■□□ 2.39
CCHCR1-230ENST00000513222 UBR1Q8IWV7 1749 aa29.97■■■□□ 2.39
CCHCR1-230ENST00000513222 KDM5AP29375 1690 aaKnown RBP29.95■■■□□ 2.38
CCHCR1-230ENST00000513222 EFCAB6Q5THR3 1501 aa29.93■■■□□ 2.38
CCHCR1-230ENST00000513222 ANKLE2Q86XL3 938 aa29.93■■■□□ 2.38
CCHCR1-230ENST00000513222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.92■■■□□ 2.38
CCHCR1-230ENST00000513222 UNC13BO14795 1591 aa29.9■■■□□ 2.38
CCHCR1-230ENST00000513222 NOS1P29475 1434 aa29.89■■■□□ 2.38
CCHCR1-230ENST00000513222 RPRD2Q5VT52 1461 aaKnown RBP29.89■■■□□ 2.38
CCHCR1-230ENST00000513222 RRBP1Q9P2E9 1410 aaKnown RBP29.88■■■□□ 2.37
CCHCR1-230ENST00000513222 ARHGAP23Q9P227 1491 aa29.88■■■□□ 2.37
CCHCR1-230ENST00000513222 SLIT1O75093 1534 aa29.87■■■□□ 2.37
CCHCR1-230ENST00000513222 ZNF335Q9H4Z2 1342 aaPredicted RBP29.87■■■□□ 2.37
CCHCR1-230ENST00000513222 TET3O43151 1660 aa29.86■■■□□ 2.37
CCHCR1-230ENST00000513222 SYNMO15061 1565 aa29.85■■■□□ 2.37
CCHCR1-230ENST00000513222 PIK3C2BO00750 1634 aa29.84■■■□□ 2.37
CCHCR1-230ENST00000513222 GCC2Q8IWJ2 1684 aa29.84■■■□□ 2.37
CCHCR1-230ENST00000513222 IQGAP1P46940 1657 aa29.83■■■□□ 2.37
CCHCR1-230ENST00000513222 NPHP4O75161 1426 aaPredicted RBP29.83■■■□□ 2.37
CCHCR1-230ENST00000513222 PPARGC1BQ86YN6 1023 aaKnown RBP29.8■■■□□ 2.36
CCHCR1-230ENST00000513222 IQGAP3Q86VI3 1631 aa29.79■■■□□ 2.36
CCHCR1-230ENST00000513222 CPS1P31327 1500 aa29.77■■■□□ 2.36
CCHCR1-230ENST00000513222 IDI1Q13907 227 aa29.77■■■□□ 2.36
CCHCR1-230ENST00000513222 SCAF11Q99590 1463 aaKnown RBP29.76■■■□□ 2.35
CCHCR1-230ENST00000513222 SLC52A1Q9NWF4 448 aa29.76■■■□□ 2.35
CCHCR1-230ENST00000513222 TMEM2Q9UHN6 1383 aa29.74■■■□□ 2.35
CCHCR1-230ENST00000513222 E9PCH4 1651 aa29.72■■■□□ 2.35
CCHCR1-230ENST00000513222 LTKP29376 864 aa29.72■■■□□ 2.35
CCHCR1-230ENST00000513222 ADGRB3O60242 1522 aa29.7■■■□□ 2.34
CCHCR1-230ENST00000513222 STRCP1A6NGW2 1772 aa29.68■■■□□ 2.34
CCHCR1-230ENST00000513222 TXNDC2Q86VQ3 553 aa29.67■■■□□ 2.34
CCHCR1-230ENST00000513222 ITGAEP38570 1179 aa29.64■■■□□ 2.34
CCHCR1-230ENST00000513222 EID1Q9Y6B2 187 aa29.64■■■□□ 2.34
CCHCR1-230ENST00000513222 NUP155O75694 1391 aa29.64■■■□□ 2.33
CCHCR1-230ENST00000513222 TMEM131LA2VDJ0 1609 aa29.63■■■□□ 2.33
CCHCR1-230ENST00000513222 MYO5BQ9ULV0 1848 aa29.63■■■□□ 2.33
CCHCR1-230ENST00000513222 NAIPQ13075 1403 aa29.62■■■□□ 2.33
CCHCR1-230ENST00000513222 STAG3Q9UJ98 1225 aa29.6■■■□□ 2.33
CCHCR1-230ENST00000513222 ZFYVE9O95405 1425 aa29.58■■■□□ 2.33
CCHCR1-230ENST00000513222 HFM1A2PYH4 1435 aa29.55■■■□□ 2.32
CCHCR1-230ENST00000513222 LRRC7Q96NW7 1537 aa29.55■■■□□ 2.32
CCHCR1-230ENST00000513222 UBAP1LF5GYI3 381 aa29.53■■■□□ 2.32
CCHCR1-230ENST00000513222 SPHKAPQ2M3C7 1700 aa29.51■■■□□ 2.31
CCHCR1-230ENST00000513222 ALKQ9UM73 1620 aa29.5■■■□□ 2.31
CCHCR1-230ENST00000513222 XIRP1Q702N8 1843 aaKnown RBP29.49■■■□□ 2.31
CCHCR1-230ENST00000513222 HDGFP51858 240 aaKnown RBP29.47■■■□□ 2.31
CCHCR1-230ENST00000513222 PLEKHG1Q9ULL1 1385 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms