RNA–Protein interactions for RNA: ENST00000513156.5

PTPN20-226, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 913 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-226ENST00000513156 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPN20-226ENST00000513156 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
PTPN20-226ENST00000513156 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
PTPN20-226ENST00000513156 ATP7AQ04656 1500 aa16.3■□□□□ 0.2
PTPN20-226ENST00000513156 ANKLE2Q86XL3 938 aa16.3■□□□□ 0.2
PTPN20-226ENST00000513156 UPF1Q92900 1129 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPN20-226ENST00000513156 INO80Q9ULG1 1556 aaPredicted RBP16.3■□□□□ 0.2
PTPN20-226ENST00000513156 A2MP01023 1474 aa16.29■□□□□ 0.2
PTPN20-226ENST00000513156 GGT6Q6P531 493 aa16.29■□□□□ 0.2
PTPN20-226ENST00000513156 SYCP2Q9BX26 1530 aa16.28■□□□□ 0.2
PTPN20-226ENST00000513156 TNRQ92752 1358 aa16.27■□□□□ 0.2
PTPN20-226ENST00000513156 SPAG9O60271 1321 aaKnown RBP16.26■□□□□ 0.19
PTPN20-226ENST00000513156 ZC3H13Q5T200 1668 aaKnown RBP16.26■□□□□ 0.19
PTPN20-226ENST00000513156 ADGBQ8N7X0 1667 aa16.26■□□□□ 0.19
PTPN20-226ENST00000513156 FBXO31Q5XUX0 539 aaPredicted RBP16.25■□□□□ 0.19
PTPN20-226ENST00000513156 CASKIN1Q8WXD9 1431 aa16.25■□□□□ 0.19
PTPN20-226ENST00000513156 UGGT1Q9NYU2 1555 aa16.23■□□□□ 0.19
PTPN20-226ENST00000513156 FAM135BQ49AJ0 1406 aa16.22■□□□□ 0.19
PTPN20-226ENST00000513156 PZPP20742 1482 aa16.22■□□□□ 0.19
PTPN20-226ENST00000513156 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.19
PTPN20-226ENST00000513156 THEMISQ8N1K5 641 aaPredicted RBP16.21■□□□□ 0.19
PTPN20-226ENST00000513156 FAM135AQ9P2D6 1515 aa16.2■□□□□ 0.18
PTPN20-226ENST00000513156 FYCO1Q9BQS8 1478 aa16.19■□□□□ 0.18
PTPN20-226ENST00000513156 NLRP1Q9C000 1473 aa16.19■□□□□ 0.18
PTPN20-226ENST00000513156 HNRNPMP52272 730 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPN20-226ENST00000513156 ZNF777Q9ULD5 760 aaPredicted RBP16.17■□□□□ 0.18
PTPN20-226ENST00000513156 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
PTPN20-226ENST00000513156 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
PTPN20-226ENST00000513156 MIA2Q96PC5 1412 aa16.16■□□□□ 0.18
PTPN20-226ENST00000513156 KDM5DQ9BY66 1539 aa16.14■□□□□ 0.18
PTPN20-226ENST00000513156 PHLPP1O60346 1717 aa16.14■□□□□ 0.17
PTPN20-226ENST00000513156 KIAA1107Q9UPP5 1409 aa16.13■□□□□ 0.17
PTPN20-226ENST00000513156 TRIM52Q96A61 297 aa16.13■□□□□ 0.17
PTPN20-226ENST00000513156 GPATCH8Q9UKJ3 1502 aaKnown RBP16.12■□□□□ 0.17
PTPN20-226ENST00000513156 LRP6O75581 1613 aa16.09■□□□□ 0.17
PTPN20-226ENST00000513156 UBR1Q8IWV7 1749 aa16.09■□□□□ 0.17
PTPN20-226ENST00000513156 PLEKHH2Q8IVE3 1493 aa16.09■□□□□ 0.17
PTPN20-226ENST00000513156 APLP2Q06481 763 aa16.07■□□□□ 0.16
PTPN20-226ENST00000513156 JCADQ9P266 1359 aa16.07■□□□□ 0.16
PTPN20-226ENST00000513156 MAP3K1Q13233 1512 aa16.07■□□□□ 0.16
PTPN20-226ENST00000513156 CFAP65Q6ZU64 1925 aaKnown RBP16.07■□□□□ 0.16
PTPN20-226ENST00000513156 SCAF11Q99590 1463 aaKnown RBP16.06■□□□□ 0.16
PTPN20-226ENST00000513156 DHX29Q7Z478 1369 aaKnown RBP16.06■□□□□ 0.16
PTPN20-226ENST00000513156 COL16A1Q07092 1604 aaPredicted RBP16.05■□□□□ 0.16
PTPN20-226ENST00000513156 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
PTPN20-226ENST00000513156 TMEM94Q12767 1356 aa16.04■□□□□ 0.16
PTPN20-226ENST00000513156 KIF3BO15066 747 aa16.04■□□□□ 0.16
PTPN20-226ENST00000513156 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
PTPN20-226ENST00000513156 MTUS2Q5JR59 1369 aa16.03■□□□□ 0.16
PTPN20-226ENST00000513156 WASHC2CQ9Y4E1 1318 aa16.03■□□□□ 0.16
PTPN20-226ENST00000513156 ZNF772Q68DY9 489 aaPredicted RBP16.03■□□□□ 0.16
PTPN20-226ENST00000513156 LTKP29376 864 aa16.01■□□□□ 0.15
PTPN20-226ENST00000513156 NCOA2Q15596 1464 aa16.01■□□□□ 0.15
PTPN20-226ENST00000513156 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
PTPN20-226ENST00000513156 RTEL1-TNFRSF6BF6WH68 1400 aa16.01■□□□□ 0.15
PTPN20-226ENST00000513156 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
PTPN20-226ENST00000513156 SLIT1O75093 1534 aa15.99■□□□□ 0.15
PTPN20-226ENST00000513156 MBD5Q9P267 1494 aa15.99■□□□□ 0.15
PTPN20-226ENST00000513156 RXRBP28702 533 aa15.99■□□□□ 0.15
PTPN20-226ENST00000513156 SHPRHQ149N8 1683 aa15.99■□□□□ 0.15
PTPN20-226ENST00000513156 ERVK-7P63135 1459 aa15.98■□□□□ 0.15
PTPN20-226ENST00000513156 TIAM1Q13009 1591 aa15.97■□□□□ 0.15
PTPN20-226ENST00000513156 SETBP1Q9Y6X0 1596 aa15.97■□□□□ 0.15
PTPN20-226ENST00000513156 RBM33Q96EV2 1170 aaKnown RBP15.97■□□□□ 0.15
PTPN20-226ENST00000513156 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.15
PTPN20-226ENST00000513156 MEX3CQ5U5Q3 659 aaKnown RBP15.96■□□□□ 0.15
PTPN20-226ENST00000513156 TXNDC2Q86VQ3 553 aa15.96■□□□□ 0.15
PTPN20-226ENST00000513156 ZNF644Q9H582 1327 aaPredicted RBP15.95■□□□□ 0.14
PTPN20-226ENST00000513156 FGD6Q6ZV73 1430 aa15.94■□□□□ 0.14
PTPN20-226ENST00000513156 ABCC3O15438 1527 aa15.94■□□□□ 0.14
PTPN20-226ENST00000513156 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
PTPN20-226ENST00000513156 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
PTPN20-226ENST00000513156 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
PTPN20-226ENST00000513156 SLAIN2Q9P270 581 aa15.93■□□□□ 0.14
PTPN20-226ENST00000513156 RGS12O14924 1447 aa15.93■□□□□ 0.14
PTPN20-226ENST00000513156 CEP152O94986 1710 aa15.92■□□□□ 0.14
PTPN20-226ENST00000513156 KANK4Q5T7N3 995 aaPredicted RBP15.92■□□□□ 0.14
PTPN20-226ENST00000513156 PROSER2Q86WR7 435 aaPredicted RBP15.92■□□□□ 0.14
PTPN20-226ENST00000513156 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
PTPN20-226ENST00000513156 KCNA6P17658 529 aa15.91■□□□□ 0.14
PTPN20-226ENST00000513156 KDM5AP29375 1690 aaKnown RBP15.9■□□□□ 0.14
PTPN20-226ENST00000513156 NKTRP30414 1462 aaKnown RBP15.9■□□□□ 0.14
PTPN20-226ENST00000513156 MSH6P52701 1360 aa15.89■□□□□ 0.13
PTPN20-226ENST00000513156 TET3O43151 1660 aa15.89■□□□□ 0.13
PTPN20-226ENST00000513156 PIK3C2BO00750 1634 aa15.88■□□□□ 0.13
PTPN20-226ENST00000513156 AHDC1Q5TGY3 1603 aaPredicted RBP15.88■□□□□ 0.13
PTPN20-226ENST00000513156 ZRANB1Q9UGI0 708 aa15.88■□□□□ 0.13
PTPN20-226ENST00000513156 MROH1Q8NDA8 1641 aa15.86■□□□□ 0.13
PTPN20-226ENST00000513156 CAMSAP2Q08AD1 1489 aa15.86■□□□□ 0.13
PTPN20-226ENST00000513156 EID1Q9Y6B2 187 aa15.86■□□□□ 0.13
PTPN20-226ENST00000513156 DIP2AQ14689 1571 aa15.86■□□□□ 0.13
PTPN20-226ENST00000513156 AFF2P51816 1311 aa15.86■□□□□ 0.13
PTPN20-226ENST00000513156 CCDC141Q6ZP82 1450 aa15.85■□□□□ 0.13
PTPN20-226ENST00000513156 CHD2O14647 1828 aaKnown RBP15.84■□□□□ 0.13
PTPN20-226ENST00000513156 TMEM2Q9UHN6 1383 aa15.84■□□□□ 0.13
PTPN20-226ENST00000513156 NUTM2BA6NNL0 878 aaPredicted RBP15.83■□□□□ 0.12
PTPN20-226ENST00000513156 NUTM2EB1AL46 878 aaPredicted RBP15.83■□□□□ 0.12
PTPN20-226ENST00000513156 RSPH4AQ5TD94 716 aa15.83■□□□□ 0.12
PTPN20-226ENST00000513156 NUTM2DQ5VT03 806 aaPredicted RBP15.83■□□□□ 0.12
PTPN20-226ENST00000513156 NUTM2AQ8IVF1 878 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms