RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 ATP10AO60312 1499 aa15.21■□□□□ 0.03
TRIO-220ENST00000512979 ZNF518AQ6AHZ1 1483 aa15.21■□□□□ 0.03
TRIO-220ENST00000512979 SIGLEC1Q9BZZ2 1709 aa15.21■□□□□ 0.03
TRIO-220ENST00000512979 C9orf84Q5VXU9 1444 aa15.2■□□□□ 0.02
TRIO-220ENST00000512979 RIOK3O14730 519 aaKnown RBP15.2■□□□□ 0.02
TRIO-220ENST00000512979 MYT1LQ9UL68 1186 aa15.2■□□□□ 0.02
TRIO-220ENST00000512979 SPDYE1Q8NFV5 336 aaPredicted RBP15.19■□□□□ 0.02
TRIO-220ENST00000512979 NKX1-1Q15270 411 aaPredicted RBP15.18■□□□□ 0.02
TRIO-220ENST00000512979 ILDR1Q86SU0 546 aaPredicted RBP15.18■□□□□ 0.02
TRIO-220ENST00000512979 KDM5CP41229 1560 aa15.18■□□□□ 0.02
TRIO-220ENST00000512979 PREX2Q70Z35 1606 aa15.17■□□□□ 0.02
TRIO-220ENST00000512979 CDC42BPBQ9Y5S2 1711 aa15.17■□□□□ 0.02
TRIO-220ENST00000512979 NBR1Q14596 966 aa15.16■□□□□ 0.02
TRIO-220ENST00000512979 LMTK3Q96Q04 1460 aa15.15■□□□□ 0.02
TRIO-220ENST00000512979 ABCC1P33527 1531 aa15.15■□□□□ 0.02
TRIO-220ENST00000512979 ARHGEF12Q9NZN5 1544 aa15.15■□□□□ 0.02
TRIO-220ENST00000512979 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
TRIO-220ENST00000512979 FAM212AQ96EL1 285 aa15.13■□□□□ 0.01
TRIO-220ENST00000512979 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
TRIO-220ENST00000512979 ZNF777Q9ULD5 760 aaPredicted RBP15.13■□□□□ 0.01
TRIO-220ENST00000512979 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
TRIO-220ENST00000512979 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
TRIO-220ENST00000512979 MLH3Q9UHC1 1453 aa15.13■□□□□ 0.01
TRIO-220ENST00000512979 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
TRIO-220ENST00000512979 DIP2CQ9Y2E4 1556 aa15.12■□□□□ 0.01
TRIO-220ENST00000512979 GPATCH8Q9UKJ3 1502 aaKnown RBP15.12■□□□□ 0.01
TRIO-220ENST00000512979 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
TRIO-220ENST00000512979 GTPBP6O43824 516 aaPredicted RBP15.11■□□□□ 0.01
TRIO-220ENST00000512979 ITSN2Q9NZM3 1697 aa15.11■□□□□ 0.01
TRIO-220ENST00000512979 CEP162Q5TB80 1403 aa15.1■□□□□ 0.01
TRIO-220ENST00000512979 STK25O00506 426 aa15.1■□□□□ 0.01
TRIO-220ENST00000512979 HSPA2P54652 639 aa15.1■□□□□ 0.01
TRIO-220ENST00000512979 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
TRIO-220ENST00000512979 ABCA6Q8N139 1617 aa15.1■□□□□ 0.01
TRIO-220ENST00000512979 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
TRIO-220ENST00000512979 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
TRIO-220ENST00000512979 CFDP1Q9UEE9 299 aaPredicted RBP15.09■□□□□ 0.01
TRIO-220ENST00000512979 CCNB3Q8WWL7 1395 aa15.09■□□□□ 0.01
TRIO-220ENST00000512979 SAMD9LQ8IVG5 1584 aa15.08■□□□□ 0
TRIO-220ENST00000512979 REREQ9P2R6 1566 aa15.08■□□□□ 0
TRIO-220ENST00000512979 VGFO15240 615 aaPredicted RBP15.08■□□□□ 0
TRIO-220ENST00000512979 CEBPAP49715 358 aaPredicted RBP15.08■□□□□ 0
TRIO-220ENST00000512979 SYCP2Q9BX26 1530 aa15.07■□□□□ 0
TRIO-220ENST00000512979 HNRNPMP52272 730 aaKnown RBP eCLIP15.07■□□□□ 0
TRIO-220ENST00000512979 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
TRIO-220ENST00000512979 SPAG9O60271 1321 aaKnown RBP15.05■□□□□ -0
TRIO-220ENST00000512979 AGLP35573 1532 aa15.05■□□□□ -0
TRIO-220ENST00000512979 KIDINS220Q9ULH0 1771 aa15.05■□□□□ -0
TRIO-220ENST00000512979 PLEKHH2Q8IVE3 1493 aa15.04■□□□□ -0
TRIO-220ENST00000512979 KIAA1107Q9UPP5 1409 aa15.04■□□□□ -0
TRIO-220ENST00000512979 ESF1Q9H501 851 aaKnown RBP15.04■□□□□ -0
TRIO-220ENST00000512979 EHBP1L1Q8N3D4 1523 aa15.03■□□□□ -0
TRIO-220ENST00000512979 CHRM1P11229 460 aaPredicted RBP15.03■□□□□ -0
TRIO-220ENST00000512979 RASEFQ8IZ41 740 aa15.03■□□□□ -0
TRIO-220ENST00000512979 TIAM1Q13009 1591 aa15□□□□□ -0.01
TRIO-220ENST00000512979 LOC105371045A0A1W2PR82 267 aa15□□□□□ -0.01
TRIO-220ENST00000512979 ZNF644Q9H582 1327 aaPredicted RBP14.99□□□□□ -0.01
TRIO-220ENST00000512979 ATP7AQ04656 1500 aa14.99□□□□□ -0.01
TRIO-220ENST00000512979 PREX1Q8TCU6 1659 aa14.99□□□□□ -0.01
TRIO-220ENST00000512979 UHRF1BP1Q6BDS2 1440 aa14.99□□□□□ -0.01
TRIO-220ENST00000512979 REM2Q8IYK8 340 aaPredicted RBP14.98□□□□□ -0.01
TRIO-220ENST00000512979 FBXO41Q8TF61 875 aa14.98□□□□□ -0.01
TRIO-220ENST00000512979 CNTLNQ9NXG0 1405 aa14.98□□□□□ -0.01
TRIO-220ENST00000512979 SGIP1Q9BQI5 828 aa14.97□□□□□ -0.01
TRIO-220ENST00000512979 STK24Q9Y6E0 443 aa14.97□□□□□ -0.01
TRIO-220ENST00000512979 A2MP01023 1474 aa14.96□□□□□ -0.01
TRIO-220ENST00000512979 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.96□□□□□ -0.01
TRIO-220ENST00000512979 ZFP91Q96JP5 570 aaPredicted RBP14.96□□□□□ -0.01
TRIO-220ENST00000512979 BCL11BQ9C0K0 894 aaPredicted RBP14.96□□□□□ -0.01
TRIO-220ENST00000512979 INO80Q9ULG1 1556 aaPredicted RBP14.96□□□□□ -0.01
TRIO-220ENST00000512979 C3P01024 1663 aa14.96□□□□□ -0.01
TRIO-220ENST00000512979 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
TRIO-220ENST00000512979 MBD5Q9P267 1494 aa14.95□□□□□ -0.02
TRIO-220ENST00000512979 VPS8Q8N3P4 1428 aa14.94□□□□□ -0.02
TRIO-220ENST00000512979 SETD1BQ9UPS6 1966 aaKnown RBP14.94□□□□□ -0.02
TRIO-220ENST00000512979 SUPT6HQ7KZ85 1726 aaKnown RBP14.94□□□□□ -0.02
TRIO-220ENST00000512979 PLXNC1O60486 1568 aa14.94□□□□□ -0.02
TRIO-220ENST00000512979 PYGBP11216 843 aa14.93□□□□□ -0.02
TRIO-220ENST00000512979 GGT6Q6P531 493 aa14.92□□□□□ -0.02
TRIO-220ENST00000512979 ZMYM3Q14202 1370 aa14.92□□□□□ -0.02
TRIO-220ENST00000512979 RTEL1-TNFRSF6BF6WH68 1400 aa14.91□□□□□ -0.02
TRIO-220ENST00000512979 CAMSAP2Q08AD1 1489 aa14.9□□□□□ -0.02
TRIO-220ENST00000512979 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
TRIO-220ENST00000512979 NPATQ14207 1427 aa14.89□□□□□ -0.03
TRIO-220ENST00000512979 LRRC9Q6ZRR7 1453 aa14.89□□□□□ -0.03
TRIO-220ENST00000512979 MROH2AA6NES4 1674 aa14.88□□□□□ -0.03
TRIO-220ENST00000512979 ADGBQ8N7X0 1667 aa14.88□□□□□ -0.03
TRIO-220ENST00000512979 RSPH4AQ5TD94 716 aa14.88□□□□□ -0.03
TRIO-220ENST00000512979 CERKQ8TCT0 537 aa14.88□□□□□ -0.03
TRIO-220ENST00000512979 RYDENQ9NUL5 291 aaKnown RBP14.88□□□□□ -0.03
TRIO-220ENST00000512979 DHX29Q7Z478 1369 aaKnown RBP14.87□□□□□ -0.03
TRIO-220ENST00000512979 STRCQ7RTU9 1775 aa14.87□□□□□ -0.03
TRIO-220ENST00000512979 CLTCQ00610 1675 aaKnown RBP14.87□□□□□ -0.03
TRIO-220ENST00000512979 KANK4Q5T7N3 995 aaPredicted RBP14.85□□□□□ -0.03
TRIO-220ENST00000512979 KIF3BO15066 747 aa14.84□□□□□ -0.03
TRIO-220ENST00000512979 TSPY4P0CV99 314 aa14.84□□□□□ -0.03
TRIO-220ENST00000512979 TSPY10P0CW01 314 aa14.84□□□□□ -0.03
TRIO-220ENST00000512979 PTPRTO14522 1441 aa14.83□□□□□ -0.03
TRIO-220ENST00000512979 PTPRKQ15262 1439 aa14.83□□□□□ -0.03
TRIO-220ENST00000512979 NCOA1Q15788 1441 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms