RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 RFX1P22670 979 aa8.77□□□□□ -1.01
TRAPPC11-209ENST00000512476 SMYD5Q6GMV2 418 aa8.77□□□□□ -1.01
TRAPPC11-209ENST00000512476 SPINK5Q9NQ38 1064 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC11-209ENST00000512476 TPD52L2O43399 206 aaKnown RBP8.77□□□□□ -1.01
TRAPPC11-209ENST00000512476 VTI1AQ96AJ9 217 aa8.77□□□□□ -1.01
TRAPPC11-209ENST00000512476 GPATCH3Q96I76 525 aa8.77□□□□□ -1.01
TRAPPC11-209ENST00000512476 FAM43BQ6ZT52 329 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC11-209ENST00000512476 POM121CA8CG34 1229 aa8.76□□□□□ -1.01
TRAPPC11-209ENST00000512476 GPR37O15354 613 aa8.76□□□□□ -1.01
TRAPPC11-209ENST00000512476 PPP1R37O75864 691 aa8.76□□□□□ -1.01
TRAPPC11-209ENST00000512476 ABCC9O60706 1549 aa8.75□□□□□ -1.01
TRAPPC11-209ENST00000512476 ACIN1Q9UKV3 1341 aaKnown RBP8.75□□□□□ -1.01
TRAPPC11-209ENST00000512476 PEX14O75381 377 aa8.75□□□□□ -1.01
TRAPPC11-209ENST00000512476 GOPCQ9HD26 462 aa8.75□□□□□ -1.01
TRAPPC11-209ENST00000512476 ZNF16P17020 682 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC11-209ENST00000512476 MS4A1P11836 297 aa8.74□□□□□ -1.01
TRAPPC11-209ENST00000512476 CCDC102AQ96A19 550 aa8.74□□□□□ -1.01
TRAPPC11-209ENST00000512476 MYH16Q9H6N6 1097 aa8.74□□□□□ -1.01
TRAPPC11-209ENST00000512476 KLHL42Q9P2K6 505 aa8.74□□□□□ -1.01
TRAPPC11-209ENST00000512476 LAS1LQ9Y4W2 734 aaKnown RBP8.74□□□□□ -1.01
TRAPPC11-209ENST00000512476 FAM9BQ8IZU0 186 aa8.73□□□□□ -1.01
TRAPPC11-209ENST00000512476 CDCA7Q9BWT1 371 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC11-209ENST00000512476 MAP4K4O95819 1239 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC11-209ENST00000512476 SNRKQ9NRH2 765 aa8.72□□□□□ -1.01
TRAPPC11-209ENST00000512476 MAFGO15525 162 aa8.72□□□□□ -1.01
TRAPPC11-209ENST00000512476 PABPN1Q86U42 306 aaKnown RBP eCLIP8.71□□□□□ -1.02
TRAPPC11-209ENST00000512476 TMTC2Q8N394 836 aa8.71□□□□□ -1.02
TRAPPC11-209ENST00000512476 APBB1IPQ7Z5R6 666 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC11-209ENST00000512476 CALR3Q96L12 384 aaKnown RBP8.71□□□□□ -1.02
TRAPPC11-209ENST00000512476 NUBP1P53384 320 aa8.7□□□□□ -1.02
TRAPPC11-209ENST00000512476 HSP90AB4PQ58FF6 505 aa8.7□□□□□ -1.02
TRAPPC11-209ENST00000512476 PROCA1Q8NCQ7 364 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC11-209ENST00000512476 PCMTD1Q96MG8 357 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC11-209ENST00000512476 NCKAP5LQ9HCH0 1330 aa8.7□□□□□ -1.02
TRAPPC11-209ENST00000512476 DNAJC14Q6Y2X3 702 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC11-209ENST00000512476 GLMNQ92990 594 aa8.7□□□□□ -1.02
TRAPPC11-209ENST00000512476 REPIN1Q9BWE0 567 aaKnown RBP8.7□□□□□ -1.02
TRAPPC11-209ENST00000512476 PATL2C9JE40 543 aaKnown RBP8.69□□□□□ -1.02
TRAPPC11-209ENST00000512476 GSE1Q14687 1217 aa8.68□□□□□ -1.02
TRAPPC11-209ENST00000512476 DCAF8Q5TAQ9 597 aa8.68□□□□□ -1.02
TRAPPC11-209ENST00000512476 FBXO31Q5XUX0 539 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC11-209ENST00000512476 OXER1Q8TDS5 423 aa8.68□□□□□ -1.02
TRAPPC11-209ENST00000512476 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.68□□□□□ -1.02
TRAPPC11-209ENST00000512476 MYO15BQ96JP2 1530 aa8.68□□□□□ -1.02
TRAPPC11-209ENST00000512476 TBC1D12O60347 775 aa8.68□□□□□ -1.02
TRAPPC11-209ENST00000512476 SRPK2P78362 688 aaKnown RBP8.68□□□□□ -1.02
TRAPPC11-209ENST00000512476 DPH6Q7L8W6 267 aa8.68□□□□□ -1.02
TRAPPC11-209ENST00000512476 AMHR2Q16671 573 aa8.67□□□□□ -1.02
TRAPPC11-209ENST00000512476 GPATCH11Q8N954 259 aa8.67□□□□□ -1.02
TRAPPC11-209ENST00000512476 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
TRAPPC11-209ENST00000512476 PBXIP1Q96AQ6 731 aa8.67□□□□□ -1.02
TRAPPC11-209ENST00000512476 GDPD2Q9HCC8 539 aa8.67□□□□□ -1.02
TRAPPC11-209ENST00000512476 SETQ01105 290 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC11-209ENST00000512476 SPTY2D1Q68D10 685 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC11-209ENST00000512476 UBXN4Q92575 508 aa8.66□□□□□ -1.02
TRAPPC11-209ENST00000512476 FECHP22830 423 aa8.66□□□□□ -1.02
TRAPPC11-209ENST00000512476 NAALADL2Q58DX5 795 aa8.66□□□□□ -1.02
TRAPPC11-209ENST00000512476 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.02
TRAPPC11-209ENST00000512476 GORABQ5T7V8 394 aa8.65□□□□□ -1.02
TRAPPC11-209ENST00000512476 MFRPQ9BY79 579 aa8.65□□□□□ -1.02
TRAPPC11-209ENST00000512476 ANO8Q9HCE9 1232 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC11-209ENST00000512476 TTLL12Q14166 644 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC11-209ENST00000512476 SBNO2Q9Y2G9 1366 aa8.65□□□□□ -1.03
TRAPPC11-209ENST00000512476 PARNO95453 639 aaKnown RBP8.64□□□□□ -1.03
TRAPPC11-209ENST00000512476 TSR1Q2NL82 804 aaKnown RBP8.64□□□□□ -1.03
TRAPPC11-209ENST00000512476 GIPC2Q8TF65 315 aa8.64□□□□□ -1.03
TRAPPC11-209ENST00000512476 C8orf37Q96NL8 207 aa8.64□□□□□ -1.03
TRAPPC11-209ENST00000512476 USTQ9Y2C2 406 aa8.64□□□□□ -1.03
TRAPPC11-209ENST00000512476 DCAF8L1A6NGE4 600 aa8.63□□□□□ -1.03
TRAPPC11-209ENST00000512476 SGIP1Q9BQI5 828 aa8.63□□□□□ -1.03
TRAPPC11-209ENST00000512476 ADAMTS19Q8TE59 1207 aa8.63□□□□□ -1.03
TRAPPC11-209ENST00000512476 DNAJC2Q99543 621 aaKnown RBP8.63□□□□□ -1.03
TRAPPC11-209ENST00000512476 TMEM88BA6NKF7 163 aa8.62□□□□□ -1.03
TRAPPC11-209ENST00000512476 NACADO15069 1562 aa8.62□□□□□ -1.03
TRAPPC11-209ENST00000512476 CFAP70Q5T0N1 1121 aa8.62□□□□□ -1.03
TRAPPC11-209ENST00000512476 IRF6O14896 467 aa8.61□□□□□ -1.03
TRAPPC11-209ENST00000512476 GIGYF2Q6Y7W6 1299 aaKnown RBP8.61□□□□□ -1.03
TRAPPC11-209ENST00000512476 ZBTB47Q9UFB7 747 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC11-209ENST00000512476 CSB-PGBD3P0DP91 1061 aa8.61□□□□□ -1.03
TRAPPC11-209ENST00000512476 ZC3H6P61129 1189 aaKnown RBP8.61□□□□□ -1.03
TRAPPC11-209ENST00000512476 NME8Q8N427 588 aa8.61□□□□□ -1.03
TRAPPC11-209ENST00000512476 LARP6Q9BRS8 491 aaKnown RBP8.61□□□□□ -1.03
TRAPPC11-209ENST00000512476 BCL2L13Q9BXK5 485 aa8.61□□□□□ -1.03
TRAPPC11-209ENST00000512476 WWC1Q8IX03 1113 aa8.6□□□□□ -1.03
TRAPPC11-209ENST00000512476 VRTNQ9H8Y1 702 aa8.6□□□□□ -1.03
TRAPPC11-209ENST00000512476 TERF2IPQ9NYB0 399 aa8.6□□□□□ -1.03
TRAPPC11-209ENST00000512476 KCNG1Q9UIX4 513 aa8.6□□□□□ -1.03
TRAPPC11-209ENST00000512476 OS9Q13438 667 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC11-209ENST00000512476 PTMSP20962 102 aa8.59□□□□□ -1.03
TRAPPC11-209ENST00000512476 TBC1D2Q9BYX2 928 aa8.59□□□□□ -1.03
TRAPPC11-209ENST00000512476 PPFIA4O75335 1185 aa8.59□□□□□ -1.03
TRAPPC11-209ENST00000512476 LARGE2Q8N3Y3 721 aa8.58□□□□□ -1.04
TRAPPC11-209ENST00000512476 POLR3EQ9NVU0 708 aa8.58□□□□□ -1.04
TRAPPC11-209ENST00000512476 GABBR1Q9UBS5 961 aa8.58□□□□□ -1.04
TRAPPC11-209ENST00000512476 PYGBP11216 843 aa8.58□□□□□ -1.04
TRAPPC11-209ENST00000512476 CDCA8Q53HL2 280 aa8.58□□□□□ -1.04
TRAPPC11-209ENST00000512476 FOXD4Q12950 439 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC11-209ENST00000512476 RALBP1Q15311 655 aa8.57□□□□□ -1.04
TRAPPC11-209ENST00000512476 MINK1Q8N4C8 1332 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC11-209ENST00000512476 RECKO95980 971 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms