RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
PDCD6-209ENST00000512466 PDE4AP27815 886 aa14.02□□□□□ -0.16
PDCD6-209ENST00000512466 ASXL2Q76L83 1435 aa14.02□□□□□ -0.17
PDCD6-209ENST00000512466 UHRF1BP1LA0JNW5 1464 aa14.01□□□□□ -0.17
PDCD6-209ENST00000512466 KIF14Q15058 1648 aa14.01□□□□□ -0.17
PDCD6-209ENST00000512466 MAGI3Q5TCQ9 1506 aa14.01□□□□□ -0.17
PDCD6-209ENST00000512466 ARHGAP5Q13017 1502 aa14.01□□□□□ -0.17
PDCD6-209ENST00000512466 RRP1P56182 461 aaKnown RBP14□□□□□ -0.17
PDCD6-209ENST00000512466 ANKRD30AQ9BXX3 1397 aa13.99□□□□□ -0.17
PDCD6-209ENST00000512466 GPATCH8Q9UKJ3 1502 aaKnown RBP13.99□□□□□ -0.17
PDCD6-209ENST00000512466 CCDC146Q8IYE0 955 aa13.99□□□□□ -0.17
PDCD6-209ENST00000512466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.98□□□□□ -0.17
PDCD6-209ENST00000512466 SPAG9O60271 1321 aaKnown RBP13.98□□□□□ -0.17
PDCD6-209ENST00000512466 CRBNQ96SW2 442 aa13.98□□□□□ -0.17
PDCD6-209ENST00000512466 KDM5BQ9UGL1 1544 aa13.98□□□□□ -0.17
PDCD6-209ENST00000512466 WDR7Q9Y4E6 1490 aa13.97□□□□□ -0.17
PDCD6-209ENST00000512466 FRAT1Q92837 279 aaPredicted RBP13.97□□□□□ -0.17
PDCD6-209ENST00000512466 ROCK2O75116 1388 aaKnown RBP13.97□□□□□ -0.17
PDCD6-209ENST00000512466 KNSTRNQ9Y448 316 aa13.97□□□□□ -0.17
PDCD6-209ENST00000512466 SPRYD3Q8NCJ5 442 aa13.97□□□□□ -0.17
PDCD6-209ENST00000512466 PNISRQ8TF01 805 aaKnown RBP13.97□□□□□ -0.17
PDCD6-209ENST00000512466 AFAP1Q8N556 730 aa13.96□□□□□ -0.17
PDCD6-209ENST00000512466 CD109Q6YHK3 1445 aa13.95□□□□□ -0.18
PDCD6-209ENST00000512466 PANK3Q9H999 370 aa13.95□□□□□ -0.18
PDCD6-209ENST00000512466 PTPN23Q9H3S7 1636 aa13.94□□□□□ -0.18
PDCD6-209ENST00000512466 NBPF1Q3BBV0 1214 aa13.94□□□□□ -0.18
PDCD6-209ENST00000512466 TCERG1O14776 1098 aaKnown RBP13.94□□□□□ -0.18
PDCD6-209ENST00000512466 NLRP13Q86W25 1043 aa13.93□□□□□ -0.18
PDCD6-209ENST00000512466 KTN1Q86UP2 1357 aaKnown RBP13.92□□□□□ -0.18
PDCD6-209ENST00000512466 CAMSAP2Q08AD1 1489 aa13.92□□□□□ -0.18
PDCD6-209ENST00000512466 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
PDCD6-209ENST00000512466 MYBBP1AQ9BQG0 1328 aaKnown RBP13.91□□□□□ -0.18
PDCD6-209ENST00000512466 PLCH2O75038 1416 aa13.91□□□□□ -0.18
PDCD6-209ENST00000512466 SLKQ9H2G2 1235 aaPredicted RBP13.91□□□□□ -0.18
PDCD6-209ENST00000512466 DAPK1P53355 1430 aa13.91□□□□□ -0.18
PDCD6-209ENST00000512466 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
PDCD6-209ENST00000512466 RALBP1Q15311 655 aa13.91□□□□□ -0.18
PDCD6-209ENST00000512466 ZCCHC11Q5TAX3 1644 aaKnown RBP13.9□□□□□ -0.18
PDCD6-209ENST00000512466 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.9□□□□□ -0.18
PDCD6-209ENST00000512466 SCAPERQ9BY12 1400 aa13.89□□□□□ -0.19
PDCD6-209ENST00000512466 ABCC5O15440 1437 aa13.89□□□□□ -0.19
PDCD6-209ENST00000512466 DDRGK1Q96HY6 314 aa13.89□□□□□ -0.19
PDCD6-209ENST00000512466 LRRIQ1Q96JM4 1722 aa13.89□□□□□ -0.19
PDCD6-209ENST00000512466 ADCY10Q96PN6 1610 aa13.88□□□□□ -0.19
PDCD6-209ENST00000512466 RIMBP3CA6NJZ7 1639 aa13.88□□□□□ -0.19
PDCD6-209ENST00000512466 RIMBP3BA6NNM3 1639 aa13.88□□□□□ -0.19
PDCD6-209ENST00000512466 RIMBP3Q9UFD9 1639 aa13.88□□□□□ -0.19
PDCD6-209ENST00000512466 KIF15Q9NS87 1388 aa13.87□□□□□ -0.19
PDCD6-209ENST00000512466 TMF1P82094 1093 aa13.87□□□□□ -0.19
PDCD6-209ENST00000512466 C20orf194Q5TEA3 1177 aa13.87□□□□□ -0.19
PDCD6-209ENST00000512466 C9orf84Q5VXU9 1444 aa13.87□□□□□ -0.19
PDCD6-209ENST00000512466 FANCAO15360 1455 aa13.87□□□□□ -0.19
PDCD6-209ENST00000512466 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
PDCD6-209ENST00000512466 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
PDCD6-209ENST00000512466 ANKRD30BQ9BXX2 1392 aa13.86□□□□□ -0.19
PDCD6-209ENST00000512466 KIF3BO15066 747 aa13.86□□□□□ -0.19
PDCD6-209ENST00000512466 ESF1Q9H501 851 aaKnown RBP13.86□□□□□ -0.19
PDCD6-209ENST00000512466 BRPF3Q9ULD4 1205 aa13.86□□□□□ -0.19
PDCD6-209ENST00000512466 ITSN2Q9NZM3 1697 aa13.85□□□□□ -0.19
PDCD6-209ENST00000512466 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
PDCD6-209ENST00000512466 CLUAP1Q96AJ1 413 aa13.85□□□□□ -0.19
PDCD6-209ENST00000512466 BCL2L13Q9BXK5 485 aa13.85□□□□□ -0.19
PDCD6-209ENST00000512466 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
PDCD6-209ENST00000512466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.85□□□□□ -0.192e-6■■■■■ 26.8
PDCD6-209ENST00000512466 ADAMTS8Q9UP79 889 aa13.85□□□□□ -0.19
PDCD6-209ENST00000512466 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
PDCD6-209ENST00000512466 TCOF1Q13428 1488 aaKnown RBP13.85□□□□□ -0.19
PDCD6-209ENST00000512466 GLIPR1L2Q4G1C9 344 aa13.84□□□□□ -0.19
PDCD6-209ENST00000512466 GGT6Q6P531 493 aa13.84□□□□□ -0.19
PDCD6-209ENST00000512466 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
PDCD6-209ENST00000512466 ARID4BQ4LE39 1312 aaPredicted RBP13.84□□□□□ -0.19
PDCD6-209ENST00000512466 ADGRL1O94910 1474 aa13.83□□□□□ -0.2
PDCD6-209ENST00000512466 ANKRD50Q9ULJ7 1429 aa13.83□□□□□ -0.2
PDCD6-209ENST00000512466 SMG6Q86US8 1419 aaKnown RBP13.82□□□□□ -0.2
PDCD6-209ENST00000512466 ROCK1Q13464 1354 aa13.82□□□□□ -0.2
PDCD6-209ENST00000512466 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
PDCD6-209ENST00000512466 APAF1O14727 1248 aa13.81□□□□□ -0.2
PDCD6-209ENST00000512466 BACH2Q9BYV9 841 aa13.81□□□□□ -0.2
PDCD6-209ENST00000512466 UPF2Q9HAU5 1272 aaKnown RBP13.81□□□□□ -0.2
PDCD6-209ENST00000512466 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDCD6-209ENST00000512466 KIAA1107Q9UPP5 1409 aa13.8□□□□□ -0.2
PDCD6-209ENST00000512466 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
PDCD6-209ENST00000512466 KANK1Q14678 1352 aa13.79□□□□□ -0.2
PDCD6-209ENST00000512466 MLECQ14165 292 aa13.79□□□□□ -0.2
PDCD6-209ENST00000512466 NFKBIBQ15653 356 aa13.79□□□□□ -0.2
PDCD6-209ENST00000512466 TTC37Q6PGP7 1564 aa13.79□□□□□ -0.2
PDCD6-209ENST00000512466 SYCP2Q9BX26 1530 aa13.78□□□□□ -0.2
PDCD6-209ENST00000512466 COG6Q9Y2V7 657 aa13.78□□□□□ -0.2
PDCD6-209ENST00000512466 TRAPPC8Q9Y2L5 1435 aa13.77□□□□□ -0.2
PDCD6-209ENST00000512466 PDE3BQ13370 1112 aa13.76□□□□□ -0.21
PDCD6-209ENST00000512466 GSE1Q14687 1217 aa13.76□□□□□ -0.21
PDCD6-209ENST00000512466 FRAT2O75474 233 aaPredicted RBP13.76□□□□□ -0.21
PDCD6-209ENST00000512466 NUTM2DQ5VT03 806 aaPredicted RBP13.76□□□□□ -0.21
PDCD6-209ENST00000512466 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
PDCD6-209ENST00000512466 HSP90AA1P07900 732 aaKnown RBP13.76□□□□□ -0.21
PDCD6-209ENST00000512466 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
PDCD6-209ENST00000512466 BCAR3O75815 825 aa13.75□□□□□ -0.21
PDCD6-209ENST00000512466 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
PDCD6-209ENST00000512466 DENND4BO75064 1496 aaPredicted RBP13.75□□□□□ -0.21
PDCD6-209ENST00000512466 MYO5CQ9NQX4 1742 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms