RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 TIMELESSQ9UNS1 1208 aa19.14■□□□□ 0.65
DEPDC1B-206ENST00000512452 CDC42BPAQ5VT25 1732 aa19.14■□□□□ 0.65
DEPDC1B-206ENST00000512452 ADGRL2O95490 1459 aa19.1■□□□□ 0.65
DEPDC1B-206ENST00000512452 SHANK2Q9UPX8 1470 aa19.1■□□□□ 0.65
DEPDC1B-206ENST00000512452 NPATQ14207 1427 aa19.09■□□□□ 0.65
DEPDC1B-206ENST00000512452 CROCC2H7BZ55 1655 aa19.08■□□□□ 0.65
DEPDC1B-206ENST00000512452 ADGBQ8N7X0 1667 aa19.08■□□□□ 0.65
DEPDC1B-206ENST00000512452 PREX2Q70Z35 1606 aa19.07■□□□□ 0.64
DEPDC1B-206ENST00000512452 MYT1LQ9UL68 1186 aa19.07■□□□□ 0.64
DEPDC1B-206ENST00000512452 CNTLNQ9NXG0 1405 aa19.07■□□□□ 0.64
DEPDC1B-206ENST00000512452 ARHGEF5Q12774 1597 aa19.06■□□□□ 0.64
DEPDC1B-206ENST00000512452 ZNF316A6NFI3 1004 aaPredicted RBP19.06■□□□□ 0.64
DEPDC1B-206ENST00000512452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.05■□□□□ 0.64
DEPDC1B-206ENST00000512452 ZNF644Q9H582 1327 aaPredicted RBP19.04■□□□□ 0.64
DEPDC1B-206ENST00000512452 RRP7BPQ9NSQ0 103 aa19.03■□□□□ 0.64
DEPDC1B-206ENST00000512452 AGLP35573 1532 aa19.03■□□□□ 0.64
DEPDC1B-206ENST00000512452 RSPH4AQ5TD94 716 aa19.02■□□□□ 0.64
DEPDC1B-206ENST00000512452 CHIC2Q9UKJ5 165 aa19.02■□□□□ 0.64
DEPDC1B-206ENST00000512452 PLEKHH2Q8IVE3 1493 aa19.01■□□□□ 0.63
DEPDC1B-206ENST00000512452 ANKRD30AQ9BXX3 1397 aa19■□□□□ 0.63
DEPDC1B-206ENST00000512452 ZMYM3Q14202 1370 aa18.99■□□□□ 0.63
DEPDC1B-206ENST00000512452 CDC42BPBQ9Y5S2 1711 aa18.99■□□□□ 0.63
DEPDC1B-206ENST00000512452 MYO5CQ9NQX4 1742 aa18.98■□□□□ 0.63
DEPDC1B-206ENST00000512452 ZNF142P52746 1687 aaPredicted RBP18.98■□□□□ 0.63
DEPDC1B-206ENST00000512452 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
DEPDC1B-206ENST00000512452 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
DEPDC1B-206ENST00000512452 KIAA1107Q9UPP5 1409 aa18.97■□□□□ 0.63
DEPDC1B-206ENST00000512452 SAMD9LQ8IVG5 1584 aa18.97■□□□□ 0.63
DEPDC1B-206ENST00000512452 CEP170BQ9Y4F5 1589 aaPredicted RBP18.97■□□□□ 0.63
DEPDC1B-206ENST00000512452 MBD5Q9P267 1494 aa18.97■□□□□ 0.63
DEPDC1B-206ENST00000512452 ZNF777Q9ULD5 760 aaPredicted RBP18.96■□□□□ 0.63
DEPDC1B-206ENST00000512452 PLCH2O75038 1416 aa18.96■□□□□ 0.63
DEPDC1B-206ENST00000512452 CCDC141Q6ZP82 1450 aa18.96■□□□□ 0.63
DEPDC1B-206ENST00000512452 DIP2CQ9Y2E4 1556 aa18.95■□□□□ 0.62
DEPDC1B-206ENST00000512452 SRCAPQ6ZRS2 3230 aa18.95■□□□□ 0.62
DEPDC1B-206ENST00000512452 MAST1Q9Y2H9 1570 aa18.94■□□□□ 0.62
DEPDC1B-206ENST00000512452 MYO3AQ8NEV4 1616 aa18.94■□□□□ 0.62
DEPDC1B-206ENST00000512452 EFCAB2Q5VUJ9 269 aa18.94■□□□□ 0.62
DEPDC1B-206ENST00000512452 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
DEPDC1B-206ENST00000512452 TRIM52Q96A61 297 aa18.93■□□□□ 0.62
DEPDC1B-206ENST00000512452 ARHGAP5Q13017 1502 aa18.93■□□□□ 0.62
DEPDC1B-206ENST00000512452 TSPY4P0CV99 314 aa18.92■□□□□ 0.62
DEPDC1B-206ENST00000512452 TSPY10P0CW01 314 aa18.92■□□□□ 0.62
DEPDC1B-206ENST00000512452 MROH2AA6NES4 1674 aa18.91■□□□□ 0.62
DEPDC1B-206ENST00000512452 DIEXFQ68CQ4 756 aaKnown RBP18.9■□□□□ 0.62
DEPDC1B-206ENST00000512452 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.62
DEPDC1B-206ENST00000512452 SIN3AQ96ST3 1273 aa18.89■□□□□ 0.61
DEPDC1B-206ENST00000512452 MPHOSPH9Q99550 1183 aa18.89■□□□□ 0.61
DEPDC1B-206ENST00000512452 ANKRD50Q9ULJ7 1429 aa18.88■□□□□ 0.61
DEPDC1B-206ENST00000512452 KDM5CP41229 1560 aa18.88■□□□□ 0.61
DEPDC1B-206ENST00000512452 TONSLQ96HA7 1378 aa18.87■□□□□ 0.61
DEPDC1B-206ENST00000512452 RNF17Q9BXT8 1623 aaKnown RBP18.86■□□□□ 0.61
DEPDC1B-206ENST00000512452 NEURL4Q96JN8 1562 aa18.86■□□□□ 0.61
DEPDC1B-206ENST00000512452 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
DEPDC1B-206ENST00000512452 LRRC7Q96NW7 1537 aa18.85■□□□□ 0.61
DEPDC1B-206ENST00000512452 SYCP2Q9BX26 1530 aa18.85■□□□□ 0.61
DEPDC1B-206ENST00000512452 KDM5DQ9BY66 1539 aa18.85■□□□□ 0.61
DEPDC1B-206ENST00000512452 NEUROD1Q13562 356 aa18.85■□□□□ 0.61
DEPDC1B-206ENST00000512452 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
DEPDC1B-206ENST00000512452 PLXNC1O60486 1568 aa18.84■□□□□ 0.61
DEPDC1B-206ENST00000512452 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.61
DEPDC1B-206ENST00000512452 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.65e-7■■■■□ 25.4
DEPDC1B-206ENST00000512452 ABCC1P33527 1531 aa18.83■□□□□ 0.6
DEPDC1B-206ENST00000512452 PZPP20742 1482 aa18.83■□□□□ 0.6
DEPDC1B-206ENST00000512452 KIF15Q9NS87 1388 aa18.82■□□□□ 0.6
DEPDC1B-206ENST00000512452 A2ML1A8K2U0 1454 aa18.82■□□□□ 0.6
DEPDC1B-206ENST00000512452 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
DEPDC1B-206ENST00000512452 ANKLE2Q86XL3 938 aa18.81■□□□□ 0.6
DEPDC1B-206ENST00000512452 ANKRD30BQ9BXX2 1392 aa18.81■□□□□ 0.6
DEPDC1B-206ENST00000512452 FAM135BQ49AJ0 1406 aa18.79■□□□□ 0.6
DEPDC1B-206ENST00000512452 ZNF772Q68DY9 489 aaPredicted RBP18.78■□□□□ 0.6
DEPDC1B-206ENST00000512452 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
DEPDC1B-206ENST00000512452 ZRANB1Q9UGI0 708 aa18.78■□□□□ 0.6
DEPDC1B-206ENST00000512452 RPRD2Q5VT52 1461 aaKnown RBP18.77■□□□□ 0.59
DEPDC1B-206ENST00000512452 FOXD1Q16676 465 aa18.76■□□□□ 0.59
DEPDC1B-206ENST00000512452 RTEL1-TNFRSF6BF6WH68 1400 aa18.75■□□□□ 0.59
DEPDC1B-206ENST00000512452 DUOX2Q9NRD8 1548 aa18.75■□□□□ 0.59
DEPDC1B-206ENST00000512452 RXRBP28702 533 aa18.75■□□□□ 0.59
DEPDC1B-206ENST00000512452 IFFO2Q5TF58 517 aa18.75■□□□□ 0.59
DEPDC1B-206ENST00000512452 NPHP4O75161 1426 aaPredicted RBP18.74■□□□□ 0.59
DEPDC1B-206ENST00000512452 STRCP1A6NGW2 1772 aa18.74■□□□□ 0.59
DEPDC1B-206ENST00000512452 RBM33Q96EV2 1170 aaKnown RBP18.74■□□□□ 0.59
DEPDC1B-206ENST00000512452 CLTCQ00610 1675 aaKnown RBP18.73■□□□□ 0.59
DEPDC1B-206ENST00000512452 ERBINQ96RT1 1412 aa18.73■□□□□ 0.59
DEPDC1B-206ENST00000512452 UNC13BO14795 1591 aa18.72■□□□□ 0.59
DEPDC1B-206ENST00000512452 SYNMO15061 1565 aa18.72■□□□□ 0.59
DEPDC1B-206ENST00000512452 NUP155O75694 1391 aa18.7■□□□□ 0.58
DEPDC1B-206ENST00000512452 MED14O60244 1454 aa18.7■□□□□ 0.58
DEPDC1B-206ENST00000512452 SETBP1Q9Y6X0 1596 aa18.68■□□□□ 0.58
DEPDC1B-206ENST00000512452 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
DEPDC1B-206ENST00000512452 CDK12Q9NYV4 1490 aaPredicted RBP18.66■□□□□ 0.58
DEPDC1B-206ENST00000512452 MEX3CQ5U5Q3 659 aaKnown RBP18.66■□□□□ 0.58
DEPDC1B-206ENST00000512452 JCADQ9P266 1359 aa18.66■□□□□ 0.58
DEPDC1B-206ENST00000512452 FAM135AQ9P2D6 1515 aa18.65■□□□□ 0.58
DEPDC1B-206ENST00000512452 IQGAP3Q86VI3 1631 aa18.64■□□□□ 0.57
DEPDC1B-206ENST00000512452 KIDINS220Q9ULH0 1771 aa18.64■□□□□ 0.57
DEPDC1B-206ENST00000512452 GGT6Q6P531 493 aa18.64■□□□□ 0.57
DEPDC1B-206ENST00000512452 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.57
DEPDC1B-206ENST00000512452 INO80Q9ULG1 1556 aaPredicted RBP18.64■□□□□ 0.57
DEPDC1B-206ENST00000512452 DEPDC5O75140 1603 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms