RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ACIN1Q9UKV3 1341 aaKnown RBP11.87□□□□□ -0.51
HTT-209ENST00000512068 ZNF644Q9H582 1327 aaPredicted RBP11.86□□□□□ -0.51
HTT-209ENST00000512068 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
HTT-209ENST00000512068 TSPY4P0CV99 314 aa11.86□□□□□ -0.51
HTT-209ENST00000512068 TSPY10P0CW01 314 aa11.86□□□□□ -0.51
HTT-209ENST00000512068 ROCK1Q13464 1354 aa11.86□□□□□ -0.51
HTT-209ENST00000512068 ABCC5O15440 1437 aa11.86□□□□□ -0.51
HTT-209ENST00000512068 PTPRKQ15262 1439 aa11.86□□□□□ -0.51
HTT-209ENST00000512068 ARHGEF5Q12774 1597 aa11.85□□□□□ -0.51
HTT-209ENST00000512068 SAMD9LQ8IVG5 1584 aa11.85□□□□□ -0.51
HTT-209ENST00000512068 RGL2O15211 777 aa11.85□□□□□ -0.51
HTT-209ENST00000512068 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
HTT-209ENST00000512068 EFCAB2Q5VUJ9 269 aa11.85□□□□□ -0.51
HTT-209ENST00000512068 CYB5RLQ6IPT4 315 aa11.85□□□□□ -0.51
HTT-209ENST00000512068 RRP7BPQ9NSQ0 103 aa11.85□□□□□ -0.51
HTT-209ENST00000512068 ABCA9Q8IUA7 1624 aa11.85□□□□□ -0.51
HTT-209ENST00000512068 PLCH2O75038 1416 aa11.85□□□□□ -0.51
HTT-209ENST00000512068 CCDC141Q6ZP82 1450 aa11.84□□□□□ -0.51
HTT-209ENST00000512068 SHANK2Q9UPX8 1470 aa11.84□□□□□ -0.51
HTT-209ENST00000512068 DHX57Q6P158 1386 aaKnown RBP11.84□□□□□ -0.51
HTT-209ENST00000512068 ANKRD30AQ9BXX3 1397 aa11.84□□□□□ -0.51
HTT-209ENST00000512068 ARAP3Q8WWN8 1544 aa11.84□□□□□ -0.51
HTT-209ENST00000512068 NAIPQ13075 1403 aa11.84□□□□□ -0.51
HTT-209ENST00000512068 SYCP2Q9BX26 1530 aa11.83□□□□□ -0.52
HTT-209ENST00000512068 CHRM1P11229 460 aaPredicted RBP11.83□□□□□ -0.52
HTT-209ENST00000512068 C9orf84Q5VXU9 1444 aa11.82□□□□□ -0.52
HTT-209ENST00000512068 CFAP74Q9C0B2 1584 aa11.82□□□□□ -0.52
HTT-209ENST00000512068 HNRNPMP52272 730 aaKnown RBP eCLIP11.81□□□□□ -0.52
HTT-209ENST00000512068 ADGRL2O95490 1459 aa11.81□□□□□ -0.52
HTT-209ENST00000512068 MAPKBP1O60336 1514 aa11.81□□□□□ -0.52
HTT-209ENST00000512068 KIAA1107Q9UPP5 1409 aa11.8□□□□□ -0.52
HTT-209ENST00000512068 TRIM52Q96A61 297 aa11.8□□□□□ -0.52
HTT-209ENST00000512068 ABCC1P33527 1531 aa11.79□□□□□ -0.52
HTT-209ENST00000512068 FANCAO15360 1455 aa11.78□□□□□ -0.52
HTT-209ENST00000512068 TSPYL2Q9H2G4 693 aaPredicted RBP11.78□□□□□ -0.52
HTT-209ENST00000512068 MAST1Q9Y2H9 1570 aa11.77□□□□□ -0.53
HTT-209ENST00000512068 NCOA1Q15788 1441 aa11.77□□□□□ -0.53
HTT-209ENST00000512068 CD109Q6YHK3 1445 aa11.77□□□□□ -0.53
HTT-209ENST00000512068 MBD5Q9P267 1494 aa11.76□□□□□ -0.53
HTT-209ENST00000512068 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
HTT-209ENST00000512068 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
HTT-209ENST00000512068 KIF15Q9NS87 1388 aa11.75□□□□□ -0.53
HTT-209ENST00000512068 ADGRL1O94910 1474 aa11.75□□□□□ -0.53
HTT-209ENST00000512068 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
HTT-209ENST00000512068 ANKRD50Q9ULJ7 1429 aa11.74□□□□□ -0.53
HTT-209ENST00000512068 PLXNC1O60486 1568 aa11.74□□□□□ -0.53
HTT-209ENST00000512068 KDM6BO15054 1643 aa11.73□□□□□ -0.53
HTT-209ENST00000512068 PYGBP11216 843 aa11.73□□□□□ -0.53
HTT-209ENST00000512068 SPAG9O60271 1321 aaKnown RBP11.72□□□□□ -0.53
HTT-209ENST00000512068 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
HTT-209ENST00000512068 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
HTT-209ENST00000512068 GLI2P10070 1586 aa11.71□□□□□ -0.53
HTT-209ENST00000512068 SCAPERQ9BY12 1400 aa11.71□□□□□ -0.53
HTT-209ENST00000512068 DUOX2Q9NRD8 1548 aa11.7□□□□□ -0.54
HTT-209ENST00000512068 ARHGEF12Q9NZN5 1544 aa11.7□□□□□ -0.54
HTT-209ENST00000512068 MAP3K4Q9Y6R4 1608 aa11.7□□□□□ -0.54
HTT-209ENST00000512068 NEO1Q92859 1461 aa11.7□□□□□ -0.54
HTT-209ENST00000512068 TRAPPC8Q9Y2L5 1435 aa11.69□□□□□ -0.54
HTT-209ENST00000512068 DIP2BQ9P265 1576 aa11.69□□□□□ -0.54
HTT-209ENST00000512068 ZNF518AQ6AHZ1 1483 aa11.69□□□□□ -0.54
HTT-209ENST00000512068 RTEL1-TNFRSF6BF6WH68 1400 aa11.69□□□□□ -0.54
HTT-209ENST00000512068 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
HTT-209ENST00000512068 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
HTT-209ENST00000512068 ATP7AQ04656 1500 aa11.67□□□□□ -0.54
HTT-209ENST00000512068 ZFYVE16Q7Z3T8 1539 aa11.67□□□□□ -0.54
HTT-209ENST00000512068 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
HTT-209ENST00000512068 NEUROD1Q13562 356 aa11.67□□□□□ -0.54
HTT-209ENST00000512068 MPHOSPH9Q99550 1183 aa11.67□□□□□ -0.54
HTT-209ENST00000512068 TSPOAP1O95153 1857 aa11.67□□□□□ -0.54
HTT-209ENST00000512068 ERBINQ96RT1 1412 aa11.67□□□□□ -0.54
HTT-209ENST00000512068 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
HTT-209ENST00000512068 TEX14Q8IWB6 1497 aa11.66□□□□□ -0.54
HTT-209ENST00000512068 NUP155O75694 1391 aa11.66□□□□□ -0.54
HTT-209ENST00000512068 TONSLQ96HA7 1378 aa11.66□□□□□ -0.54
HTT-209ENST00000512068 AFAP1Q8N556 730 aa11.65□□□□□ -0.54
HTT-209ENST00000512068 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
HTT-209ENST00000512068 DENND4BO75064 1496 aaPredicted RBP11.64□□□□□ -0.55
HTT-209ENST00000512068 POGZQ7Z3K3 1410 aa11.64□□□□□ -0.55
HTT-209ENST00000512068 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
HTT-209ENST00000512068 VGFO15240 615 aaPredicted RBP11.64□□□□□ -0.55
HTT-209ENST00000512068 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
HTT-209ENST00000512068 BBXQ8WY36 941 aaPredicted RBP11.64□□□□□ -0.55
HTT-209ENST00000512068 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
HTT-209ENST00000512068 KDM5DQ9BY66 1539 aa11.64□□□□□ -0.55
HTT-209ENST00000512068 UNC13BO14795 1591 aa11.63□□□□□ -0.55
HTT-209ENST00000512068 HECW2Q9P2P5 1572 aa11.63□□□□□ -0.55
HTT-209ENST00000512068 SGIP1Q9BQI5 828 aa11.63□□□□□ -0.55
HTT-209ENST00000512068 ZNF467Q7Z7K2 595 aaPredicted RBP11.62□□□□□ -0.55
HTT-209ENST00000512068 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
HTT-209ENST00000512068 SIN3AQ96ST3 1273 aa11.62□□□□□ -0.55
HTT-209ENST00000512068 EIF2AK4Q9P2K8 1649 aaKnown RBP11.61□□□□□ -0.55
HTT-209ENST00000512068 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
HTT-209ENST00000512068 PZPP20742 1482 aa11.61□□□□□ -0.55
HTT-209ENST00000512068 KDM5CP41229 1560 aa11.61□□□□□ -0.55
HTT-209ENST00000512068 KIF13AQ9H1H9 1805 aa11.6□□□□□ -0.55
HTT-209ENST00000512068 KIDINS220Q9ULH0 1771 aa11.6□□□□□ -0.55
HTT-209ENST00000512068 KANK1Q14678 1352 aa11.6□□□□□ -0.55
HTT-209ENST00000512068 KIF12Q96FN5 646 aa11.6□□□□□ -0.55
HTT-209ENST00000512068 FAM135AQ9P2D6 1515 aa11.6□□□□□ -0.55
HTT-209ENST00000512068 IQGAP3Q86VI3 1631 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms