RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 ARHGEF5Q12774 1597 aa29.86■■■□□ 2.37
SMAD1-211ENST00000512019 FAM50AQ14320 339 aaKnown RBP29.85■■■□□ 2.37
SMAD1-211ENST00000512019 DHX29Q7Z478 1369 aaKnown RBP29.85■■■□□ 2.37
SMAD1-211ENST00000512019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.85■■■□□ 2.37
SMAD1-211ENST00000512019 NCKAP5LQ9HCH0 1330 aa29.82■■■□□ 2.36
SMAD1-211ENST00000512019 RSPH4AQ5TD94 716 aa29.82■■■□□ 2.36
SMAD1-211ENST00000512019 PPP6R1Q9UPN7 881 aa29.8■■■□□ 2.36
SMAD1-211ENST00000512019 DNMT1P26358 1616 aaKnown RBP29.79■■■□□ 2.36
SMAD1-211ENST00000512019 KIF3BO15066 747 aa29.77■■■□□ 2.36
SMAD1-211ENST00000512019 PLA2R1Q13018 1463 aa29.76■■■□□ 2.35
SMAD1-211ENST00000512019 DAPK1P53355 1430 aa29.75■■■□□ 2.35
SMAD1-211ENST00000512019 CROCC2H7BZ55 1655 aa29.74■■■□□ 2.35
SMAD1-211ENST00000512019 KDM5DQ9BY66 1539 aa29.73■■■□□ 2.35
SMAD1-211ENST00000512019 ABCC5O15440 1437 aa29.72■■■□□ 2.35
SMAD1-211ENST00000512019 A2ML1A8K2U0 1454 aa29.72■■■□□ 2.35
SMAD1-211ENST00000512019 SHANK2Q9UPX8 1470 aa29.72■■■□□ 2.35
SMAD1-211ENST00000512019 TSPY4P0CV99 314 aa29.7■■■□□ 2.35
SMAD1-211ENST00000512019 TSPY10P0CW01 314 aa29.7■■■□□ 2.35
SMAD1-211ENST00000512019 FBXO31Q5XUX0 539 aaPredicted RBP29.7■■■□□ 2.35
SMAD1-211ENST00000512019 ZNF335Q9H4Z2 1342 aaPredicted RBP29.7■■■□□ 2.34
SMAD1-211ENST00000512019 IQSEC2Q5JU85 1478 aa29.69■■■□□ 2.34
SMAD1-211ENST00000512019 MAST1Q9Y2H9 1570 aa29.69■■■□□ 2.34
SMAD1-211ENST00000512019 FAM135AQ9P2D6 1515 aa29.68■■■□□ 2.34
SMAD1-211ENST00000512019 PKD2Q13563 968 aa29.68■■■□□ 2.34
SMAD1-211ENST00000512019 PZPP20742 1482 aa29.68■■■□□ 2.34
SMAD1-211ENST00000512019 POLR1AO95602 1720 aaPredicted RBP29.67■■■□□ 2.34
SMAD1-211ENST00000512019 TNRQ92752 1358 aa29.65■■■□□ 2.34
SMAD1-211ENST00000512019 WASHC2CQ9Y4E1 1318 aa29.63■■■□□ 2.33
SMAD1-211ENST00000512019 RNF17Q9BXT8 1623 aaKnown RBP29.63■■■□□ 2.33
SMAD1-211ENST00000512019 ITGAEP38570 1179 aa29.61■■■□□ 2.33
SMAD1-211ENST00000512019 NEURL4Q96JN8 1562 aa29.6■■■□□ 2.33
SMAD1-211ENST00000512019 EIF2AK4Q9P2K8 1649 aaKnown RBP29.57■■■□□ 2.32
SMAD1-211ENST00000512019 ADGRL2O95490 1459 aa29.57■■■□□ 2.32
SMAD1-211ENST00000512019 CEP152O94986 1710 aa29.56■■■□□ 2.32
SMAD1-211ENST00000512019 ZC3H13Q5T200 1668 aaKnown RBP29.56■■■□□ 2.32
SMAD1-211ENST00000512019 MROH1Q8NDA8 1641 aa29.56■■■□□ 2.32
SMAD1-211ENST00000512019 ANKRD30AQ9BXX3 1397 aa29.55■■■□□ 2.32
SMAD1-211ENST00000512019 ABCC3O15438 1527 aa29.55■■■□□ 2.32
SMAD1-211ENST00000512019 CHIC2Q9UKJ5 165 aa29.54■■■□□ 2.32
SMAD1-211ENST00000512019 ROCK1Q13464 1354 aa29.53■■■□□ 2.32
SMAD1-211ENST00000512019 CFAP65Q6ZU64 1925 aaKnown RBP29.53■■■□□ 2.32
SMAD1-211ENST00000512019 DISP3Q9P2K9 1392 aa29.52■■■□□ 2.32
SMAD1-211ENST00000512019 TRIM26Q12899 539 aaPredicted RBP29.5■■■□□ 2.31
SMAD1-211ENST00000512019 UGGT1Q9NYU2 1555 aa29.5■■■□□ 2.31
SMAD1-211ENST00000512019 NLRP1Q9C000 1473 aa29.49■■■□□ 2.31
SMAD1-211ENST00000512019 KIF15Q9NS87 1388 aa29.49■■■□□ 2.31
SMAD1-211ENST00000512019 SPATA31D1Q6ZQQ2 1576 aa29.48■■■□□ 2.31
SMAD1-211ENST00000512019 UBAP1LF5GYI3 381 aa29.48■■■□□ 2.31
SMAD1-211ENST00000512019 DUOX2Q9NRD8 1548 aa29.45■■■□□ 2.31
SMAD1-211ENST00000512019 ILDR2Q71H61 639 aa29.44■■■□□ 2.3
SMAD1-211ENST00000512019 RRP7BPQ9NSQ0 103 aa29.44■■■□□ 2.3
SMAD1-211ENST00000512019 DEPDC5O75140 1603 aa29.44■■■□□ 2.3
SMAD1-211ENST00000512019 ERVK-7P63135 1459 aa29.42■■■□□ 2.3
SMAD1-211ENST00000512019 ANKLE2Q86XL3 938 aa29.42■■■□□ 2.3
SMAD1-211ENST00000512019 THEMISQ8N1K5 641 aaPredicted RBP29.42■■■□□ 2.3
SMAD1-211ENST00000512019 VWDEQ8N2E2 1590 aa29.41■■■□□ 2.3
SMAD1-211ENST00000512019 IQGAP1P46940 1657 aa29.4■■■□□ 2.3
SMAD1-211ENST00000512019 CPS1P31327 1500 aa29.39■■■□□ 2.3
SMAD1-211ENST00000512019 HFM1A2PYH4 1435 aa29.38■■■□□ 2.29
SMAD1-211ENST00000512019 NPHP4O75161 1426 aaPredicted RBP29.38■■■□□ 2.29
SMAD1-211ENST00000512019 ERBINQ96RT1 1412 aa29.38■■■□□ 2.29
SMAD1-211ENST00000512019 GCC2Q8IWJ2 1684 aa29.38■■■□□ 2.29
SMAD1-211ENST00000512019 MED14O60244 1454 aa29.38■■■□□ 2.29
SMAD1-211ENST00000512019 UBR1Q8IWV7 1749 aa29.38■■■□□ 2.29
SMAD1-211ENST00000512019 PRDM15P57071 1507 aaPredicted RBP29.36■■■□□ 2.29
SMAD1-211ENST00000512019 STRCP1A6NGW2 1772 aa29.36■■■□□ 2.29
SMAD1-211ENST00000512019 NAIPQ13075 1403 aa29.34■■■□□ 2.29
SMAD1-211ENST00000512019 ANKRD50Q9ULJ7 1429 aa29.34■■■□□ 2.29
SMAD1-211ENST00000512019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.26■■■□□ 2.27
SMAD1-211ENST00000512019 ARHGAP31Q2M1Z3 1444 aa29.26■■■□□ 2.27
SMAD1-211ENST00000512019 SCAF1Q9H7N4 1312 aaKnown RBP29.25■■■□□ 2.27
SMAD1-211ENST00000512019 ALKQ9UM73 1620 aa29.25■■■□□ 2.27
SMAD1-211ENST00000512019 PIP4K2BP78356 416 aa29.25■■■□□ 2.27
SMAD1-211ENST00000512019 SETD5Q9C0A6 1442 aa29.24■■■□□ 2.27
SMAD1-211ENST00000512019 PIK3C2BO00750 1634 aa29.23■■■□□ 2.27
SMAD1-211ENST00000512019 TOM1O60784 492 aa29.2■■■□□ 2.26
SMAD1-211ENST00000512019 HSPA1LP34931 641 aa29.2■■■□□ 2.26
SMAD1-211ENST00000512019 SCAF11Q99590 1463 aaKnown RBP29.2■■■□□ 2.26
SMAD1-211ENST00000512019 ARHGAP23Q9P227 1491 aa29.2■■■□□ 2.26
SMAD1-211ENST00000512019 SLIT1O75093 1534 aa29.2■■■□□ 2.26
SMAD1-211ENST00000512019 SOCS7O14512 581 aa29.18■■■□□ 2.26
SMAD1-211ENST00000512019 LRRC7Q96NW7 1537 aa29.18■■■□□ 2.26
SMAD1-211ENST00000512019 SYNMO15061 1565 aa29.18■■■□□ 2.26
SMAD1-211ENST00000512019 LTKP29376 864 aa29.17■■■□□ 2.26
SMAD1-211ENST00000512019 UNC13BO14795 1591 aa29.17■■■□□ 2.26
SMAD1-211ENST00000512019 KANK1Q14678 1352 aa29.15■■■□□ 2.26
SMAD1-211ENST00000512019 PCGF6Q9BYE7 350 aa29.15■■■□□ 2.26
SMAD1-211ENST00000512019 LMTK2Q8IWU2 1503 aa29.15■■■□□ 2.26
SMAD1-211ENST00000512019 RAB3GAP2Q9H2M9 1393 aa29.13■■■□□ 2.25
SMAD1-211ENST00000512019 XIRP1Q702N8 1843 aaKnown RBP29.13■■■□□ 2.25
SMAD1-211ENST00000512019 TXNDC2Q86VQ3 553 aa29.13■■■□□ 2.25
SMAD1-211ENST00000512019 ACIN1Q9UKV3 1341 aaKnown RBP29.13■■■□□ 2.25
SMAD1-211ENST00000512019 KDM5AP29375 1690 aaKnown RBP29.1■■■□□ 2.25
SMAD1-211ENST00000512019 MED1Q15648 1581 aaPredicted RBP29.09■■■□□ 2.25
SMAD1-211ENST00000512019 EFCAB6Q5THR3 1501 aa29.09■■■□□ 2.25
SMAD1-211ENST00000512019 TMEM2Q9UHN6 1383 aa29.06■■■□□ 2.24
SMAD1-211ENST00000512019 HRCP23327 699 aa29.06■■■□□ 2.24
SMAD1-211ENST00000512019 IDI1Q13907 227 aa29.05■■■□□ 2.24
SMAD1-211ENST00000512019 IQGAP3Q86VI3 1631 aa29.05■■■□□ 2.24
SMAD1-211ENST00000512019 NUP155O75694 1391 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms