RNA–Protein interactions for RNA: ENST00000511977.1

LETM1-205, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-205ENST00000511977 NCKAP5LQ9HCH0 1330 aa27.89■■■□□ 2.05
LETM1-205ENST00000511977 FGD6Q6ZV73 1430 aa27.86■■■□□ 2.05
LETM1-205ENST00000511977 PTPN23Q9H3S7 1636 aa27.86■■■□□ 2.05
LETM1-205ENST00000511977 MAST1Q9Y2H9 1570 aa27.85■■■□□ 2.05
LETM1-205ENST00000511977 KIF3BO15066 747 aa27.82■■■□□ 2.04
LETM1-205ENST00000511977 PPP6R1Q9UPN7 881 aa27.8■■■□□ 2.04
LETM1-205ENST00000511977 KDM5DQ9BY66 1539 aa27.79■■■□□ 2.04
LETM1-205ENST00000511977 PLA2R1Q13018 1463 aa27.79■■■□□ 2.04
LETM1-205ENST00000511977 TCOF1Q13428 1488 aaKnown RBP27.79■■■□□ 2.04
LETM1-205ENST00000511977 ZNF335Q9H4Z2 1342 aaPredicted RBP27.78■■■□□ 2.04
LETM1-205ENST00000511977 FBXO31Q5XUX0 539 aaPredicted RBP27.78■■■□□ 2.04
LETM1-205ENST00000511977 DNMT1P26358 1616 aaKnown RBP27.77■■■□□ 2.04
LETM1-205ENST00000511977 A2ML1A8K2U0 1454 aa27.76■■■□□ 2.04
LETM1-205ENST00000511977 SHANK2Q9UPX8 1470 aa27.76■■■□□ 2.03
LETM1-205ENST00000511977 ABCC5O15440 1437 aa27.75■■■□□ 2.03
LETM1-205ENST00000511977 DAPK1P53355 1430 aa27.75■■■□□ 2.03
LETM1-205ENST00000511977 CROCC2H7BZ55 1655 aa27.74■■■□□ 2.03
LETM1-205ENST00000511977 PZPP20742 1482 aa27.73■■■□□ 2.03
LETM1-205ENST00000511977 TNRQ92752 1358 aa27.72■■■□□ 2.03
LETM1-205ENST00000511977 FAM50AQ14320 339 aaKnown RBP27.7■■■□□ 2.02
LETM1-205ENST00000511977 DUOX2Q9NRD8 1548 aa27.69■■■□□ 2.02
LETM1-205ENST00000511977 FAM135AQ9P2D6 1515 aa27.69■■■□□ 2.02
LETM1-205ENST00000511977 KIF15Q9NS87 1388 aa27.69■■■□□ 2.02
LETM1-205ENST00000511977 IQSEC2Q5JU85 1478 aa27.69■■■□□ 2.02
LETM1-205ENST00000511977 WASHC2CQ9Y4E1 1318 aa27.68■■■□□ 2.02
LETM1-205ENST00000511977 PKD2Q13563 968 aa27.68■■■□□ 2.02
LETM1-205ENST00000511977 NEURL4Q96JN8 1562 aa27.68■■■□□ 2.02
LETM1-205ENST00000511977 RNF17Q9BXT8 1623 aaKnown RBP27.67■■■□□ 2.02
LETM1-205ENST00000511977 EIF2AK4Q9P2K8 1649 aaKnown RBP27.67■■■□□ 2.02
LETM1-205ENST00000511977 RRP7BPQ9NSQ0 103 aa27.66■■■□□ 2.02
LETM1-205ENST00000511977 POLR1AO95602 1720 aaPredicted RBP27.66■■■□□ 2.02
LETM1-205ENST00000511977 MROH1Q8NDA8 1641 aa27.65■■■□□ 2.02
LETM1-205ENST00000511977 CHIC2Q9UKJ5 165 aa27.64■■■□□ 2.02
LETM1-205ENST00000511977 ANKRD30AQ9BXX3 1397 aa27.63■■■□□ 2.01
LETM1-205ENST00000511977 ABCC3O15438 1527 aa27.63■■■□□ 2.01
LETM1-205ENST00000511977 PPARGC1BQ86YN6 1023 aaKnown RBP27.63■■■□□ 2.01
LETM1-205ENST00000511977 ERBINQ96RT1 1412 aa27.61■■■□□ 2.01
LETM1-205ENST00000511977 CEP152O94986 1710 aa27.59■■■□□ 2.01
LETM1-205ENST00000511977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.59■■■□□ 2.01
LETM1-205ENST00000511977 DISP3Q9P2K9 1392 aa27.58■■■□□ 2.01
LETM1-205ENST00000511977 ZC3H13Q5T200 1668 aaKnown RBP27.57■■■□□ 2
LETM1-205ENST00000511977 UGGT1Q9NYU2 1555 aa27.56■■■□□ 2
LETM1-205ENST00000511977 UBAP1LF5GYI3 381 aa27.54■■■□□ 2
LETM1-205ENST00000511977 SPATA31D1Q6ZQQ2 1576 aa27.54■■■□□ 2
LETM1-205ENST00000511977 NLRP1Q9C000 1473 aa27.54■■■□□ 2
LETM1-205ENST00000511977 ADGRL2O95490 1459 aa27.53■■■□□ 2
LETM1-205ENST00000511977 ILDR2Q71H61 639 aa27.53■■■□□ 2
LETM1-205ENST00000511977 ERVK-7P63135 1459 aa27.52■■■□□ 2
LETM1-205ENST00000511977 PRDM15P57071 1507 aaPredicted RBP27.5■■□□□ 1.99
LETM1-205ENST00000511977 VWDEQ8N2E2 1590 aa27.49■■□□□ 1.99
LETM1-205ENST00000511977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.49■■□□□ 1.995e-6■■□□□ 12.6
LETM1-205ENST00000511977 KANK1Q14678 1352 aa27.48■■□□□ 1.99
LETM1-205ENST00000511977 CFAP65Q6ZU64 1925 aaKnown RBP27.47■■□□□ 1.99
LETM1-205ENST00000511977 DEPDC5O75140 1603 aa27.46■■□□□ 1.99
LETM1-205ENST00000511977 NPHP4O75161 1426 aaPredicted RBP27.46■■□□□ 1.99
LETM1-205ENST00000511977 ANKLE2Q86XL3 938 aa27.45■■□□□ 1.98
LETM1-205ENST00000511977 THEMISQ8N1K5 641 aaPredicted RBP27.44■■□□□ 1.98
LETM1-205ENST00000511977 MED14O60244 1454 aa27.44■■□□□ 1.98
LETM1-205ENST00000511977 IQGAP1P46940 1657 aa27.43■■□□□ 1.98
LETM1-205ENST00000511977 CPS1P31327 1500 aa27.42■■□□□ 1.98
LETM1-205ENST00000511977 ITGAEP38570 1179 aa27.42■■□□□ 1.98
LETM1-205ENST00000511977 UBR1Q8IWV7 1749 aa27.41■■□□□ 1.98
LETM1-205ENST00000511977 ANKRD50Q9ULJ7 1429 aa27.41■■□□□ 1.98
LETM1-205ENST00000511977 STRCP1A6NGW2 1772 aa27.4■■□□□ 1.98
LETM1-205ENST00000511977 ROCK1Q13464 1354 aa27.37■■□□□ 1.97
LETM1-205ENST00000511977 ARHGAP31Q2M1Z3 1444 aa27.36■■□□□ 1.97
LETM1-205ENST00000511977 ALKQ9UM73 1620 aa27.36■■□□□ 1.97
LETM1-205ENST00000511977 SCAF1Q9H7N4 1312 aaKnown RBP27.35■■□□□ 1.97
LETM1-205ENST00000511977 PIP4K2BP78356 416 aa27.34■■□□□ 1.97
LETM1-205ENST00000511977 LMTK2Q8IWU2 1503 aa27.32■■□□□ 1.96
LETM1-205ENST00000511977 RRBP1Q9P2E9 1410 aaKnown RBP27.32■■□□□ 1.96
LETM1-205ENST00000511977 PIK3C2BO00750 1634 aa27.3■■□□□ 1.96
LETM1-205ENST00000511977 HSPA1LP34931 641 aa27.3■■□□□ 1.96
LETM1-205ENST00000511977 SCAF11Q99590 1463 aaKnown RBP27.29■■□□□ 1.96
LETM1-205ENST00000511977 ARHGAP23Q9P227 1491 aa27.28■■□□□ 1.96
LETM1-205ENST00000511977 LTKP29376 864 aa27.27■■□□□ 1.96
LETM1-205ENST00000511977 SLIT1O75093 1534 aa27.26■■□□□ 1.96
LETM1-205ENST00000511977 EFCAB6Q5THR3 1501 aa27.26■■□□□ 1.96
LETM1-205ENST00000511977 LRRC7Q96NW7 1537 aa27.26■■□□□ 1.96
LETM1-205ENST00000511977 SYNMO15061 1565 aa27.24■■□□□ 1.95
LETM1-205ENST00000511977 UNC13BO14795 1591 aa27.23■■□□□ 1.95
LETM1-205ENST00000511977 TOM1O60784 492 aa27.23■■□□□ 1.95
LETM1-205ENST00000511977 SOCS7O14512 581 aa27.22■■□□□ 1.95
LETM1-205ENST00000511977 MED1Q15648 1581 aaPredicted RBP27.2■■□□□ 1.94
LETM1-205ENST00000511977 TXNDC2Q86VQ3 553 aa27.2■■□□□ 1.94
LETM1-205ENST00000511977 SENP3Q9H4L4 574 aaPredicted RBP27.18■■□□□ 1.94
LETM1-205ENST00000511977 RPRD2Q5VT52 1461 aaKnown RBP27.18■■□□□ 1.94
LETM1-205ENST00000511977 TET3O43151 1660 aa27.17■■□□□ 1.94
LETM1-205ENST00000511977 STAG3Q9UJ98 1225 aa27.16■■□□□ 1.94
LETM1-205ENST00000511977 TMEM2Q9UHN6 1383 aa27.16■■□□□ 1.94
LETM1-205ENST00000511977 XIRP1Q702N8 1843 aaKnown RBP27.16■■□□□ 1.94
LETM1-205ENST00000511977 NOS1P29475 1434 aa27.15■■□□□ 1.94
LETM1-205ENST00000511977 NUP155O75694 1391 aa27.14■■□□□ 1.94
LETM1-205ENST00000511977 IDI1Q13907 227 aa27.14■■□□□ 1.94
LETM1-205ENST00000511977 IQGAP3Q86VI3 1631 aa27.12■■□□□ 1.93
LETM1-205ENST00000511977 GCC2Q8IWJ2 1684 aa27.12■■□□□ 1.93
LETM1-205ENST00000511977 ADGRB3O60242 1522 aa27.11■■□□□ 1.93
LETM1-205ENST00000511977 KDM5AP29375 1690 aaKnown RBP27.11■■□□□ 1.93
LETM1-205ENST00000511977 SLC52A1Q9NWF4 448 aa27.09■■□□□ 1.93
LETM1-205ENST00000511977 EID1Q9Y6B2 187 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms