RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 LTBP4Q8N2S1 1624 aa15.8■□□□□ 0.12
HOXA4-203ENST00000511914 NCOA1Q15788 1441 aa15.8■□□□□ 0.12
HOXA4-203ENST00000511914 RRBP1Q9P2E9 1410 aaKnown RBP15.8■□□□□ 0.12
HOXA4-203ENST00000511914 INO80Q9ULG1 1556 aaPredicted RBP15.79■□□□□ 0.12
HOXA4-203ENST00000511914 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
HOXA4-203ENST00000511914 MYO3AQ8NEV4 1616 aa15.79■□□□□ 0.12
HOXA4-203ENST00000511914 ILDR2Q71H61 639 aa15.78■□□□□ 0.12
HOXA4-203ENST00000511914 EHBP1L1Q8N3D4 1523 aa15.78■□□□□ 0.12
HOXA4-203ENST00000511914 ZMYM3Q14202 1370 aa15.77■□□□□ 0.12
HOXA4-203ENST00000511914 PLXNC1O60486 1568 aa15.77■□□□□ 0.11
HOXA4-203ENST00000511914 SPATA31D1Q6ZQQ2 1576 aa15.77■□□□□ 0.11
HOXA4-203ENST00000511914 ZNF142P52746 1687 aaPredicted RBP15.76■□□□□ 0.11
HOXA4-203ENST00000511914 ADGBQ8N7X0 1667 aa15.76■□□□□ 0.11
HOXA4-203ENST00000511914 NCKAP5LQ9HCH0 1330 aa15.75■□□□□ 0.11
HOXA4-203ENST00000511914 CFDP1Q9UEE9 299 aaPredicted RBP15.75■□□□□ 0.11
HOXA4-203ENST00000511914 A2MP01023 1474 aa15.75■□□□□ 0.11
HOXA4-203ENST00000511914 NPATQ14207 1427 aa15.75■□□□□ 0.11
HOXA4-203ENST00000511914 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
HOXA4-203ENST00000511914 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
HOXA4-203ENST00000511914 GGT6Q6P531 493 aa15.74■□□□□ 0.11
HOXA4-203ENST00000511914 CEP170BQ9Y4F5 1589 aaPredicted RBP15.73■□□□□ 0.11
HOXA4-203ENST00000511914 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
HOXA4-203ENST00000511914 KIAA1107Q9UPP5 1409 aa15.71■□□□□ 0.11
HOXA4-203ENST00000511914 IQSEC2Q5JU85 1478 aa15.71■□□□□ 0.1
HOXA4-203ENST00000511914 ZNF335Q9H4Z2 1342 aaPredicted RBP15.7■□□□□ 0.1
HOXA4-203ENST00000511914 ZNF644Q9H582 1327 aaPredicted RBP15.69■□□□□ 0.1
HOXA4-203ENST00000511914 PTPRKQ15262 1439 aa15.69■□□□□ 0.1
HOXA4-203ENST00000511914 NCOA2Q15596 1464 aa15.69■□□□□ 0.1
HOXA4-203ENST00000511914 ABCB7O75027 752 aa15.68■□□□□ 0.1
HOXA4-203ENST00000511914 MYOM3Q5VTT5 1437 aa15.67■□□□□ 0.1
HOXA4-203ENST00000511914 PLA2R1Q13018 1463 aa15.66■□□□□ 0.1
HOXA4-203ENST00000511914 POLR1AO95602 1720 aaPredicted RBP15.66■□□□□ 0.1
HOXA4-203ENST00000511914 DNMT1P26358 1616 aaKnown RBP15.66■□□□□ 0.1
HOXA4-203ENST00000511914 SOCS7O14512 581 aa15.66■□□□□ 0.1
HOXA4-203ENST00000511914 UBAP1LF5GYI3 381 aa15.65■□□□□ 0.1
HOXA4-203ENST00000511914 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
HOXA4-203ENST00000511914 FGD6Q6ZV73 1430 aa15.65■□□□□ 0.1
HOXA4-203ENST00000511914 TCOF1Q13428 1488 aaKnown RBP15.65■□□□□ 0.1
HOXA4-203ENST00000511914 MIA2Q96PC5 1412 aa15.64■□□□□ 0.09
HOXA4-203ENST00000511914 MBD5Q9P267 1494 aa15.64■□□□□ 0.09
HOXA4-203ENST00000511914 PKD2Q13563 968 aa15.63■□□□□ 0.09
HOXA4-203ENST00000511914 A2ML1A8K2U0 1454 aa15.61■□□□□ 0.09
HOXA4-203ENST00000511914 CAMSAP2Q08AD1 1489 aa15.59■□□□□ 0.09
HOXA4-203ENST00000511914 KIF3BO15066 747 aa15.59■□□□□ 0.09
HOXA4-203ENST00000511914 FBXO31Q5XUX0 539 aaPredicted RBP15.59■□□□□ 0.09
HOXA4-203ENST00000511914 DHX29Q7Z478 1369 aaKnown RBP15.59■□□□□ 0.09
HOXA4-203ENST00000511914 RTEL1-TNFRSF6BF6WH68 1400 aa15.59■□□□□ 0.09
HOXA4-203ENST00000511914 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.09
HOXA4-203ENST00000511914 NEURL4Q96JN8 1562 aa15.58■□□□□ 0.09
HOXA4-203ENST00000511914 CCDC141Q6ZP82 1450 aa15.58■□□□□ 0.08
HOXA4-203ENST00000511914 HRCP23327 699 aa15.56■□□□□ 0.08
HOXA4-203ENST00000511914 FAM50AQ14320 339 aaKnown RBP15.56■□□□□ 0.08
HOXA4-203ENST00000511914 TNRQ92752 1358 aa15.56■□□□□ 0.08
HOXA4-203ENST00000511914 PZPP20742 1482 aa15.55■□□□□ 0.08
HOXA4-203ENST00000511914 WASHC2CQ9Y4E1 1318 aa15.54■□□□□ 0.08
HOXA4-203ENST00000511914 ZEB1P37275 1124 aaPredicted RBP15.54■□□□□ 0.08
HOXA4-203ENST00000511914 PIP4K2BP78356 416 aa15.54■□□□□ 0.08
HOXA4-203ENST00000511914 PTPN23Q9H3S7 1636 aa15.53■□□□□ 0.08
HOXA4-203ENST00000511914 CFAP65Q6ZU64 1925 aaKnown RBP15.53■□□□□ 0.08
HOXA4-203ENST00000511914 UGGT1Q9NYU2 1555 aa15.52■□□□□ 0.07
HOXA4-203ENST00000511914 ARHGEF5Q12774 1597 aa15.51■□□□□ 0.07
HOXA4-203ENST00000511914 CPS1P31327 1500 aa15.51■□□□□ 0.07
HOXA4-203ENST00000511914 SHANK2Q9UPX8 1470 aa15.51■□□□□ 0.07
HOXA4-203ENST00000511914 FAM135AQ9P2D6 1515 aa15.5■□□□□ 0.07
HOXA4-203ENST00000511914 IQGAP1P46940 1657 aa15.5■□□□□ 0.07
HOXA4-203ENST00000511914 MED1Q15648 1581 aaPredicted RBP15.49■□□□□ 0.07
HOXA4-203ENST00000511914 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
HOXA4-203ENST00000511914 CEP152O94986 1710 aa15.49■□□□□ 0.07
HOXA4-203ENST00000511914 HSPA1LP34931 641 aa15.49■□□□□ 0.07
HOXA4-203ENST00000511914 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
HOXA4-203ENST00000511914 ZC3H13Q5T200 1668 aaKnown RBP15.48■□□□□ 0.07
HOXA4-203ENST00000511914 RNF17Q9BXT8 1623 aaKnown RBP15.48■□□□□ 0.07
HOXA4-203ENST00000511914 ANKLE2Q86XL3 938 aa15.48■□□□□ 0.07
HOXA4-203ENST00000511914 STRCP1A6NGW2 1772 aa15.48■□□□□ 0.07
HOXA4-203ENST00000511914 NLRP1Q9C000 1473 aa15.47■□□□□ 0.07
HOXA4-203ENST00000511914 DEPDC5O75140 1603 aa15.47■□□□□ 0.07
HOXA4-203ENST00000511914 TOM1O60784 492 aa15.47■□□□□ 0.07
HOXA4-203ENST00000511914 TSPY4P0CV99 314 aa15.47■□□□□ 0.07
HOXA4-203ENST00000511914 TSPY10P0CW01 314 aa15.47■□□□□ 0.07
HOXA4-203ENST00000511914 RSPH4AQ5TD94 716 aa15.47■□□□□ 0.07
HOXA4-203ENST00000511914 ACIN1Q9UKV3 1341 aaKnown RBP15.46■□□□□ 0.07
HOXA4-203ENST00000511914 NPHP4O75161 1426 aaPredicted RBP15.46■□□□□ 0.07
HOXA4-203ENST00000511914 SETD5Q9C0A6 1442 aa15.46■□□□□ 0.07
HOXA4-203ENST00000511914 THEMISQ8N1K5 641 aaPredicted RBP15.46■□□□□ 0.07
HOXA4-203ENST00000511914 ABCC3O15438 1527 aa15.45■□□□□ 0.06
HOXA4-203ENST00000511914 CCER1Q8TC90 406 aaPredicted RBP15.45■□□□□ 0.06
HOXA4-203ENST00000511914 EIF2AK4Q9P2K8 1649 aaKnown RBP15.44■□□□□ 0.06
HOXA4-203ENST00000511914 ITGAEP38570 1179 aa15.44■□□□□ 0.06
HOXA4-203ENST00000511914 MAST1Q9Y2H9 1570 aa15.44■□□□□ 0.06
HOXA4-203ENST00000511914 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
HOXA4-203ENST00000511914 ALKQ9UM73 1620 aa15.43■□□□□ 0.06
HOXA4-203ENST00000511914 MED14O60244 1454 aa15.43■□□□□ 0.06
HOXA4-203ENST00000511914 UBR1Q8IWV7 1749 aa15.43■□□□□ 0.06
HOXA4-203ENST00000511914 MROH1Q8NDA8 1641 aa15.43■□□□□ 0.06
HOXA4-203ENST00000511914 HFM1A2PYH4 1435 aa15.43■□□□□ 0.06
HOXA4-203ENST00000511914 ROCK1Q13464 1354 aa15.42■□□□□ 0.06
HOXA4-203ENST00000511914 ERVK-7P63135 1459 aa15.4■□□□□ 0.06
HOXA4-203ENST00000511914 DAPK1P53355 1430 aa15.39■□□□□ 0.05
HOXA4-203ENST00000511914 SYNMO15061 1565 aa15.39■□□□□ 0.05
HOXA4-203ENST00000511914 CROCC2H7BZ55 1655 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms