RNA–Protein interactions for RNA: ENST00000511481.5

SEC24D-211, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24D, Length 2,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-211ENST00000511481 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
SEC24D-211ENST00000511481 TMC2Q8TDI7 906 aa8.31□□□□□ -1.08
SEC24D-211ENST00000511481 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.3□□□□□ -1.08
SEC24D-211ENST00000511481 GPCPD1Q9NPB8 672 aa8.3□□□□□ -1.08
SEC24D-211ENST00000511481 PLPP6Q8IY26 295 aa8.3□□□□□ -1.08
SEC24D-211ENST00000511481 FBXW7Q969H0 707 aa8.3□□□□□ -1.08
SEC24D-211ENST00000511481 PRIM1P49642 420 aaKnown RBP8.29□□□□□ -1.08
SEC24D-211ENST00000511481 CCDC180Q9P1Z9 1646 aa8.29□□□□□ -1.08
SEC24D-211ENST00000511481 PRKAR2AP13861 404 aaKnown RBP8.29□□□□□ -1.08
SEC24D-211ENST00000511481 PDE4CQ08493 712 aa8.28□□□□□ -1.08
SEC24D-211ENST00000511481 BANK1Q8NDB2 785 aa8.28□□□□□ -1.08
SEC24D-211ENST00000511481 SSTR3P32745 418 aaPredicted RBP8.28□□□□□ -1.08
SEC24D-211ENST00000511481 PATL2C9JE40 543 aaKnown RBP8.27□□□□□ -1.09
SEC24D-211ENST00000511481 DDX12PQ92771 950 aa8.27□□□□□ -1.09
SEC24D-211ENST00000511481 CACNB1Q02641 598 aaPredicted RBP8.27□□□□□ -1.09
SEC24D-211ENST00000511481 SNRKQ9NRH2 765 aa8.27□□□□□ -1.09
SEC24D-211ENST00000511481 POLR3EQ9NVU0 708 aa8.27□□□□□ -1.09
SEC24D-211ENST00000511481 MDM2Q00987 491 aaPredicted RBP8.26□□□□□ -1.09
SEC24D-211ENST00000511481 BEGAINQ9BUH8 593 aa8.26□□□□□ -1.09
SEC24D-211ENST00000511481 MICALL2Q8IY33 904 aa8.26□□□□□ -1.09
SEC24D-211ENST00000511481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.26□□□□□ -1.099e-7■■■□□ 14.8
SEC24D-211ENST00000511481 PHOX2BQ99453 314 aa8.25□□□□□ -1.09
SEC24D-211ENST00000511481 TBC1D12O60347 775 aa8.24□□□□□ -1.09
SEC24D-211ENST00000511481 ATP1B4Q9UN42 357 aaPredicted RBP8.24□□□□□ -1.09
SEC24D-211ENST00000511481 E9PSI1 815 aa8.24□□□□□ -1.09
SEC24D-211ENST00000511481 MYSM1Q5VVJ2 828 aa8.24□□□□□ -1.09
SEC24D-211ENST00000511481 KIF3CO14782 793 aa8.23□□□□□ -1.09
SEC24D-211ENST00000511481 RFC5P40937 340 aa8.23□□□□□ -1.09
SEC24D-211ENST00000511481 KCNA1Q09470 495 aa8.23□□□□□ -1.09
SEC24D-211ENST00000511481 TRPC6Q9Y210 931 aa8.23□□□□□ -1.09
SEC24D-211ENST00000511481 CALR3Q96L12 384 aaKnown RBP8.22□□□□□ -1.09
SEC24D-211ENST00000511481 FAM217BQ9NTX9 383 aaPredicted RBP8.22□□□□□ -1.09
SEC24D-211ENST00000511481 C2orf72A6NCS6 295 aa8.21□□□□□ -1.09
SEC24D-211ENST00000511481 PHF12Q96QT6 1004 aa8.21□□□□□ -1.09
SEC24D-211ENST00000511481 BRD1O95696 1058 aa8.21□□□□□ -1.1
SEC24D-211ENST00000511481 CLK2P49760 499 aaKnown RBP8.21□□□□□ -1.1
SEC24D-211ENST00000511481 CENPBP07199 599 aaPredicted RBP8.2□□□□□ -1.1
SEC24D-211ENST00000511481 DPY19L2Q6NUT2 758 aa8.2□□□□□ -1.1
SEC24D-211ENST00000511481 UPF1Q92900 1129 aaKnown RBP eCLIP8.2□□□□□ -1.1
SEC24D-211ENST00000511481 GDPD2Q9HCC8 539 aa8.2□□□□□ -1.1
SEC24D-211ENST00000511481 NPDC1Q9NQX5 325 aaPredicted RBP8.2□□□□□ -1.1
SEC24D-211ENST00000511481 TMEM259Q4ZIN3 620 aa8.19□□□□□ -1.1
SEC24D-211ENST00000511481 FBXO31Q5XUX0 539 aaPredicted RBP8.19□□□□□ -1.1
SEC24D-211ENST00000511481 GLMNQ92990 594 aa8.19□□□□□ -1.1
SEC24D-211ENST00000511481 MTMR14Q8NCE2 650 aa8.19□□□□□ -1.1
SEC24D-211ENST00000511481 ZRANB1Q9UGI0 708 aa8.19□□□□□ -1.1
SEC24D-211ENST00000511481 AMOTL2Q9Y2J4 779 aa8.18□□□□□ -1.1
SEC24D-211ENST00000511481 FXR2P51116 673 aaKnown RBP eCLIP8.18□□□□□ -1.13e-9■■■■□ 25.1
SEC24D-211ENST00000511481 WWC1Q8IX03 1113 aa8.18□□□□□ -1.1
SEC24D-211ENST00000511481 USTQ9Y2C2 406 aa8.18□□□□□ -1.1
SEC24D-211ENST00000511481 PPP2R2DQ66LE6 453 aa8.17□□□□□ -1.1
SEC24D-211ENST00000511481 PBXIP1Q96AQ6 731 aa8.17□□□□□ -1.1
SEC24D-211ENST00000511481 CDHR5Q9HBB8 845 aa8.17□□□□□ -1.1
SEC24D-211ENST00000511481 POM121CA8CG34 1229 aa8.16□□□□□ -1.1
SEC24D-211ENST00000511481 SOCS7O14512 581 aa8.16□□□□□ -1.1
SEC24D-211ENST00000511481 TMEM121BQ9BXQ6 578 aaPredicted RBP8.16□□□□□ -1.1
SEC24D-211ENST00000511481 EVI5O60447 810 aa8.15□□□□□ -1.1
SEC24D-211ENST00000511481 TTLL13PA6NNM8 815 aa8.15□□□□□ -1.11
SEC24D-211ENST00000511481 MS4A3Q96HJ5 214 aa8.15□□□□□ -1.11
SEC24D-211ENST00000511481 TBC1D2Q9BYX2 928 aa8.15□□□□□ -1.11
SEC24D-211ENST00000511481 TIE1P35590 1138 aa8.14□□□□□ -1.11
SEC24D-211ENST00000511481 ABL2P42684 1182 aa8.14□□□□□ -1.11
SEC24D-211ENST00000511481 EN1Q05925 392 aaPredicted RBP8.13□□□□□ -1.11
SEC24D-211ENST00000511481 METTL3Q86U44 580 aaKnown RBP8.13□□□□□ -1.11
SEC24D-211ENST00000511481 DIXDC1Q155Q3 683 aa8.13□□□□□ -1.11
SEC24D-211ENST00000511481 CCDC27Q2M243 656 aa8.13□□□□□ -1.11
SEC24D-211ENST00000511481 LIMD1Q9UGP4 676 aa8.13□□□□□ -1.11
SEC24D-211ENST00000511481 DIEXFQ68CQ4 756 aaKnown RBP8.12□□□□□ -1.11
SEC24D-211ENST00000511481 PDCD7Q8N8D1 485 aaKnown RBP8.12□□□□□ -1.11
SEC24D-211ENST00000511481 SRPK2P78362 688 aaKnown RBP8.12□□□□□ -1.11
SEC24D-211ENST00000511481 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.11□□□□□ -1.11
SEC24D-211ENST00000511481 CSB-PGBD3P0DP91 1061 aa8.11□□□□□ -1.11
SEC24D-211ENST00000511481 CD44P16070 742 aaKnown RBP8.11□□□□□ -1.11
SEC24D-211ENST00000511481 NLRP7Q8WX94 980 aa8.11□□□□□ -1.11
SEC24D-211ENST00000511481 PRM3Q9NNZ6 103 aa8.11□□□□□ -1.11
SEC24D-211ENST00000511481 TBC1D2BQ9UPU7 963 aa8.11□□□□□ -1.11
SEC24D-211ENST00000511481 SND1Q7KZF4 910 aaKnown RBP eCLIP8.1□□□□□ -1.116e-7■■■□□ 15
SEC24D-211ENST00000511481 TTBK1Q5TCY1 1321 aaPredicted RBP8.1□□□□□ -1.11
SEC24D-211ENST00000511481 OATP04181 439 aa8.1□□□□□ -1.11
SEC24D-211ENST00000511481 CFAP70Q5T0N1 1121 aa8.09□□□□□ -1.11
SEC24D-211ENST00000511481 BCL11AQ9H165 835 aa8.09□□□□□ -1.11
SEC24D-211ENST00000511481 BOLA1Q9Y3E2 137 aa8.09□□□□□ -1.11
SEC24D-211ENST00000511481 IVNS1ABPQ9Y6Y0 642 aa8.09□□□□□ -1.11
SEC24D-211ENST00000511481 TUSC1Q2TAM9 212 aa8.09□□□□□ -1.11
SEC24D-211ENST00000511481 FAM161AQ3B820 660 aa8.09□□□□□ -1.11
SEC24D-211ENST00000511481 MAP3K7O43318 606 aa8.08□□□□□ -1.12
SEC24D-211ENST00000511481 ADAMTS19Q8TE59 1207 aa8.08□□□□□ -1.12
SEC24D-211ENST00000511481 TRIM35Q9UPQ4 493 aa8.08□□□□□ -1.12
SEC24D-211ENST00000511481 PXYLP1Q8TE99 480 aa8.08□□□□□ -1.12
SEC24D-211ENST00000511481 ANO8Q9HCE9 1232 aaPredicted RBP8.08□□□□□ -1.12
SEC24D-211ENST00000511481 RIC3Q7Z5B4 369 aa8.07□□□□□ -1.12
SEC24D-211ENST00000511481 EPAS1Q99814 870 aa8.07□□□□□ -1.12
SEC24D-211ENST00000511481 BMP2KQ9NSY1 1161 aaPredicted RBP8.07□□□□□ -1.12
SEC24D-211ENST00000511481 PHF14O94880 888 aa8.07□□□□□ -1.12
SEC24D-211ENST00000511481 HDGFL1Q5TGJ6 251 aa8.07□□□□□ -1.12
SEC24D-211ENST00000511481 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
SEC24D-211ENST00000511481 RFX1P22670 979 aa8.06□□□□□ -1.12
SEC24D-211ENST00000511481 TSR1Q2NL82 804 aaKnown RBP8.05□□□□□ -1.12
SEC24D-211ENST00000511481 HMGB1P09429 215 aaKnown RBP8.05□□□□□ -1.12
SEC24D-211ENST00000511481 ADGRG1Q9Y653 693 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms